Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0065541 Helianthus annuus HOM05D000097 ORTHO05D013868 5.3e-81 304.3 153 100.0
HanXRQChr03g0064701 Helianthus annuus HOM05D000097 ORTHO05D000041 3.1e-20 102.4 147 45.6
ECA240G1960 Erigeron canadensis HOM05D000097 ORTHO05D000041 6.4e-18 94.7 146 39.0
HanXRQChr03g0064161 Helianthus annuus HOM05D000097 ORTHO05D013868 2.1e-16 89.7 137 43.1
HanXRQChr13g0407271 Helianthus annuus HOM05D000097 ORTHO05D013868 1.7e-15 86.7 120 44.2
Lsat_1_v5_gn_7_50661 Lactuca sativa HOM05D000097 ORTHO05D000041 1.8e-12 76.6 141 38.3
ECA240G2940 Erigeron canadensis HOM05D000097 ORTHO05D000041 6.8e-12 74.7 158 34.2
ECA240G4035 Erigeron canadensis HOM05D000097 ORTHO05D000041 2.6e-11 72.8 136 32.4
HanXRQChr09g0243681 Helianthus annuus HOM05D000097 ORTHO05D000041 2.6e-11 72.8 151 33.8
Lsat_1_v5_gn_9_86381 Lactuca sativa HOM05D000097 ORTHO05D000041 5.8e-11 71.6 135 33.3
HanXRQChr03g0064091 Helianthus annuus HOM05D000097 ORTHO05D013868 1.7e-10 70.1 62 56.5
ECA246G5130 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.8e-10 68.9 137 35.8
ECA240G1123 Erigeron canadensis HOM05D000097 ORTHO05D000041 4.9e-10 68.6 135 30.4
HanXRQChr09g0243431 Helianthus annuus HOM05D000097 ORTHO05D000041 1.4e-09 67.0 133 31.6
HanXRQChr09g0248031 Helianthus annuus HOM05D000097 ORTHO05D017907 1.4e-09 67.0 146 32.2
HanXRQChr03g0064611 Helianthus annuus HOM05D000097 ORTHO05D000041 1.9e-09 66.6 64 54.7
Rhsim11G0103100 Rhododendron simsii HOM05D000097 ORTHO05D000041 3.2e-09 65.9 138 34.1
Lsat_1_v5_gn_7_51200 Lactuca sativa HOM05D000097 ORTHO05D000041 5.4e-09 65.1 131 34.4
Dinv01673 Davidia involucrata HOM05D000097 ORTHO05D000041 7.1e-09 64.7 143 31.5
ECA240G4269 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.2e-08 63.9 134 35.1
ECA234G4647 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.5e-08 62.4 147 32.7
HanXRQChr03g0064111 Helianthus annuus HOM05D000097 ORTHO05D013868 6.0e-08 61.6 60 48.3
HanXRQChr09g0243801 Helianthus annuus HOM05D000097 ORTHO05D000041 1.7e-07 60.1 132 30.3
Actinidia39662 Actinidia chinensis HOM05D000097 ORTHO05D000041 3.9e-07 58.9 141 31.9
HanXRQChr11g0353581 Helianthus annuus HOM05D000097 ORTHO05D000041 3.9e-07 58.9 104 35.6
Lsat_1_v5_gn_7_44800 Lactuca sativa HOM05D000097 ORTHO05D000041 3.9e-07 58.9 153 27.5
Actinidia30215 Actinidia chinensis HOM05D000097 ORTHO05D000041 6.6e-07 58.2 144 29.9
Lsat_1_v5_gn_7_50561 Lactuca sativa HOM05D000097 ORTHO05D000041 6.6e-07 58.2 63 46.0
Dinv16441 Davidia involucrata HOM05D000097 ORTHO05D000041 8.6e-07 57.8 103 33.0
Rhsim05G0009000 Rhododendron simsii HOM05D000097 ORTHO05D000041 8.6e-07 57.8 141 30.5
HanXRQChr02g0046131 Helianthus annuus HOM05D000097 ORTHO05D000041 1.1e-06 57.4 124 32.3
ECA232G4442 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.5e-06 57.0 110 28.2
ECA248G3447 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.5e-06 57.0 107 32.7
Hma1.2p1_0311F.1_g121100 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.5e-06 57.0 147 30.6
Lsat_1_v5_gn_7_39341 Lactuca sativa HOM05D000097 ORTHO05D000041 1.5e-06 57.0 133 28.6
ECA232G4282 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.9e-06 56.6 110 28.2
Lsat_1_v5_gn_7_39020 Lactuca sativa HOM05D000097 ORTHO05D000041 3.3e-06 55.8 139 25.9
ECA246G0417 Erigeron canadensis HOM05D000097 ORTHO05D000041 4.3e-06 55.5 143 31.5
HanXRQChr08g0223211 Helianthus annuus HOM05D000097 ORTHO05D000041 4.3e-06 55.5 140 31.4
Lsat_1_v5_gn_8_106600 Lactuca sativa HOM05D000097 ORTHO05D000041 4.3e-06 55.5 123 29.3
HanXRQChr15g0487441 Helianthus annuus HOM05D000097 ORTHO05D000041 5.6e-06 55.1 110 27.3
Hma1.2p1_2812F.1_g328890 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 5.6e-06 55.1 116 33.6
Lsat_1_v5_gn_8_106541 Lactuca sativa HOM05D000097 ORTHO05D000041 5.6e-06 55.1 110 28.2
Lsat_1_v5_gn_8_128001 Lactuca sativa HOM05D000097 ORTHO05D000041 5.6e-06 55.1 140 25.7
VMungo1309G0755 Vigna mungo HOM05D000097 ORTHO05D000041 5.6e-06 55.1 107 29.9
ECA232G4419 Erigeron canadensis HOM05D000097 ORTHO05D000041 7.3e-06 54.7 105 29.5
HanXRQChr09g0243771 Helianthus annuus HOM05D000097 ORTHO05D000041 7.3e-06 54.7 120 29.2
MSTRG.10514 Avicennia marina HOM05D000097 ORTHO05D000041 9.6e-06 54.3 144 28.5
Dinv03804 Davidia involucrata HOM05D000097 ORTHO05D000041 9.6e-06 54.3 138 29.7
ECA236G2161 Erigeron canadensis HOM05D000097 ORTHO05D000041 9.6e-06 54.3 128 27.3


User provided reference genes

Program Settings