Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 5.0e-129 464.5 251 100.0
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 1.4e-94 350.1 246 80.1
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 1.4e-91 340.1 243 74.9
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 1.1e-75 287.3 251 62.9
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 6.0e-74 281.6 252 61.1
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 1.6e-71 273.5 251 61.0
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 6.2e-71 271.6 251 59.0
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.1e-70 270.8 253 59.7
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 4.1e-70 268.9 253 59.3
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.9e-67 260.0 251 57.8
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 3.2e-67 259.2 243 59.3
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 3.2e-67 259.2 243 59.3
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 9.3e-67 257.7 246 57.3
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 3.9e-65 252.3 251 55.4
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 8.7e-65 251.1 251 56.2
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 7.4e-64 248.1 251 57.0
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 9.7e-64 247.7 243 58.0
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 1.3e-63 247.3 240 58.8
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 1.6e-63 246.9 242 54.1
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 2.2e-63 246.5 244 56.1
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 3.7e-63 245.7 249 56.6
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 4.8e-63 245.4 249 55.4
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 1.1e-62 244.2 249 54.6
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 1.1e-62 244.2 247 53.0
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 1.8e-62 243.4 247 53.8
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 4.1e-62 242.3 247 53.0
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 9.0e-62 241.1 250 52.4
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 1.2e-61 240.7 249 53.0
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 1.5e-61 240.4 250 53.2
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 2.0e-61 240.0 251 54.6
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 2.0e-61 240.0 247 53.0
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 2.6e-61 239.6 247 53.0
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 3.4e-61 239.2 250 53.2
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 4.5e-61 238.8 250 52.8
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 5.9e-61 238.4 250 53.2
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 7.7e-61 238.0 247 53.0
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 1.3e-60 237.3 247 52.6
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.3e-60 237.3 211 60.7
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 1.7e-60 236.9 247 53.0
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 1.7e-60 236.9 245 53.5
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 2.9e-60 236.1 249 51.8
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 5.0e-60 235.3 251 54.6
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 1.1e-59 234.2 251 54.6
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 1.9e-59 233.4 247 53.0
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 1.9e-59 233.4 251 53.4
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.6e-58 230.3 253 54.2
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 3.6e-58 229.2 274 50.0
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 3.6e-58 229.2 245 52.2
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 1.8e-57 226.9 265 49.1
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 3.3e-56 222.6 250 52.0
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 4.3e-56 222.2 258 52.7
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 2.8e-55 219.5 251 49.8
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 6.9e-54 214.9 256 51.6
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 1.2e-53 214.2 230 52.6
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 2.6e-53 213.0 295 45.1
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 5.0e-52 208.8 251 50.6
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 1.4e-51 207.2 247 48.6
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 1.4e-51 207.2 252 50.8
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 4.2e-51 205.7 251 48.6
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 9.4e-51 204.5 228 50.0
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 9.4e-51 204.5 233 51.5
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 9.4e-51 204.5 196 57.7
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 4.7e-50 202.2 248 46.0
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 6.1e-50 201.8 276 45.3
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 1.8e-49 200.3 228 49.6
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 5.1e-49 198.7 200 55.0
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 5.7e-48 195.3 245 47.8
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 4.8e-47 192.2 259 46.7
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 7.0e-46 188.3 250 46.4
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 9.1e-46 188.0 246 45.1
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 5.9e-45 185.3 202 51.5
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 7.7e-45 184.9 200 52.0
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 6.5e-44 181.8 262 45.8
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 8.5e-44 181.4 258 43.4
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 4.2e-43 179.1 246 45.1
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 3.6e-42 176.0 249 44.6
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 1.0e-41 174.5 251 43.0
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 9.7e-40 167.9 251 42.6
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 4.8e-39 165.6 144 64.6
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 9.1e-38 161.4 251 42.2
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 1.6e-37 160.6 150 58.7
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 1.6e-37 160.6 154 55.2
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 1.1e-35 154.5 129 64.3
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 7.2e-35 151.8 121 65.3
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 2.1e-34 150.2 251 39.8
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 4.0e-33 146.0 233 41.6
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 3.7e-31 139.4 121 61.2
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 2.8e-23 113.2 126 51.6
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 5.0e-20 102.4 169 42.6
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.5e-19 100.9 169 40.2
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 7.3e-19 98.6 126 43.7
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.0e-17 94.7 78 60.3
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 1.8e-14 84.0 132 40.2
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 1.2e-13 81.3 243 26.7
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 5.9e-13 79.0 168 34.5
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 9.5e-11 71.6 65 52.3
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 1.2e-10 71.2 61 54.1
TWI63G1298 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 5.2e-09 65.9 100 43.0
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 8.9e-09 65.1 100 41.0


User provided reference genes

Program Settings