Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 1.1e-273 946.0 493 100.0
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 4.6e-211 738.0 494 75.9
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 1.4e-199 699.9 503 73.6
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 4.4e-161 572.0 496 59.9
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 9.8e-161 570.9 492 60.6
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 2.7e-158 562.8 491 61.5
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 5.9e-158 561.6 491 58.9
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 7.8e-158 561.2 488 58.4
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 1.0e-157 560.8 492 58.7
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 1.7e-157 560.1 488 58.4
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 2.9e-157 559.3 494 59.7
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 1.1e-156 557.4 487 60.2
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 2.5e-156 556.2 484 58.9
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 4.3e-156 555.4 485 59.2
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.8e-155 552.7 493 59.0
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 4.7e-155 552.0 494 58.3
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 4.0e-154 548.9 495 59.8
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 6.8e-154 548.1 488 57.6
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 2.0e-153 546.6 488 57.8
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 2.0e-153 546.6 428 64.3
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 2.6e-153 546.2 501 57.9
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 4.4e-153 545.4 500 58.0
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 9.8e-153 544.3 491 58.5
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 1.7e-152 543.5 487 57.3
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 4.9e-152 542.0 483 58.0
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 8.3e-152 541.2 489 57.5
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 1.1e-151 540.8 494 57.1
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 1.4e-151 540.4 491 57.2
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 1.4e-151 540.4 488 58.0
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 9.2e-151 537.7 501 56.9
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 6.0e-150 535.0 498 57.4
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 2.3e-149 533.1 479 60.5
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 2.3e-149 533.1 488 56.6
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 8.6e-149 531.2 488 56.6
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 2.5e-148 529.6 488 57.8
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 3.3e-148 529.3 490 56.9
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 5.6e-148 528.5 516 55.6
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 1.2e-147 527.3 492 58.5
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 3.6e-147 525.8 484 56.6
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 2.3e-146 523.1 491 56.6
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 6.8e-146 521.5 478 57.7
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 2.0e-145 520.0 464 58.2
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 4.4e-145 518.8 491 57.6
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 5.8e-145 518.5 494 55.7
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 2.2e-144 516.5 495 55.8
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 2.9e-144 516.2 458 57.4
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 1.1e-143 514.2 489 55.8
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 7.0e-143 511.5 497 54.9
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.2e-142 510.8 434 59.2
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 2.7e-142 509.6 482 55.6
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 4.6e-142 508.8 495 54.5
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 7.8e-142 508.1 489 55.2
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 1.3e-141 507.3 491 54.0
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 3.0e-141 506.1 490 54.7
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 3.9e-141 505.8 484 57.6
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 7.3e-140 501.5 494 53.4
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 1.6e-139 500.4 469 56.9
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 2.8e-139 499.6 487 54.2
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 4.7e-139 498.8 492 54.7
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 6.2e-139 498.4 463 56.4
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 1.4e-138 497.3 488 54.9
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 3.4e-137 492.7 483 55.9
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 2.2e-136 490.0 490 53.9
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 5.4e-135 485.3 521 52.4
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 9.2e-135 484.6 492 52.6
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 3.5e-134 482.6 435 57.7
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 7.8e-134 481.5 493 52.3
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 1.3e-133 480.7 486 51.9
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 2.3e-133 479.9 489 52.1
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 3.3e-132 476.1 486 51.2
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 1.2e-131 474.2 558 47.8
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 2.8e-131 473.0 486 51.2
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 5.2e-130 468.8 491 52.1
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 6.8e-130 468.4 493 51.7
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 1.3e-128 464.2 393 62.1
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 1.7e-128 463.8 419 56.3
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 2.2e-128 463.4 489 50.5
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 4.2e-127 459.1 488 52.9
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 5.4e-127 458.8 489 51.7
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 7.1e-127 458.4 489 51.7
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 7.1e-127 458.4 499 51.1
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 2.1e-126 456.8 491 51.9
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 2.1e-126 456.8 491 51.9
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 1.7e-125 453.8 490 51.6
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 2.5e-124 449.9 494 52.2
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 2.1e-123 446.8 499 49.5
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 4.0e-122 442.6 493 49.7
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 5.3e-122 442.2 432 53.9
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 5.3e-122 442.2 524 48.3
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 1.2e-121 441.0 489 50.7
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 3.4e-121 439.5 371 61.2
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 5.8e-121 438.7 542 48.3
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 2.3e-117 426.8 494 50.0
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 1.1e-114 417.9 386 55.2
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.1e-114 417.9 496 45.4
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 2.4e-114 416.8 495 45.1
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 3.9e-109 399.4 357 58.3
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 1.2e-105 387.9 397 51.4
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 2.6e-105 386.7 357 56.3
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 2.5e-95 353.6 394 50.3
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 1.9e-92 344.0 493 42.2
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 9.7e-92 341.7 491 41.3
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 3.7e-91 339.7 474 44.7
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 2.5e-87 327.0 355 58.0
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 6.1e-86 322.4 353 51.8
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 2.5e-84 317.0 248 64.5
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 3.3e-76 290.0 495 37.6
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 4.5e-65 253.1 498 34.9
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 4.0e-61 240.0 288 45.8
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 8.8e-61 238.8 235 54.9
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 4.1e-58 229.9 167 68.3
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 1.7e-56 224.6 267 46.4
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 3.2e-55 220.3 412 34.0
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 3.2e-55 220.3 185 61.1
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 5.9e-49 199.5 269 43.5
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 8.3e-43 179.1 280 40.4
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 1.0e-40 172.2 108 76.9
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 1.3e-40 171.8 236 41.5
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 1.8e-37 161.4 134 61.2
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 1.5e-36 158.3 365 31.0
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 5.8e-36 156.4 343 32.4
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 2.2e-35 154.5 170 50.0
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 8.3e-35 152.5 133 59.4
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 2.0e-33 147.9 249 39.0
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 5.0e-32 143.3 132 58.3
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 7.8e-25 119.4 135 48.9
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 1.9e-23 114.8 138 48.6
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 2.8e-22 110.9 163 44.8
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 3.1e-21 107.5 105 58.1
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 1.9e-15 88.2 106 40.6
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 1.4e-13 82.0 436 21.1
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 6.6e-08 63.2 70 48.6
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 3.6e-06 57.4 42 64.3
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 3.6e-06 57.4 42 64.3


User provided reference genes

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