Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0064791 Helianthus annuus HOM05D004002 ORTHO05D004668 6.2e-39 163.7 85 100.0
HanXRQChr05g0143441 Helianthus annuus HOM05D004002 ORTHO05D004668 1.9e-11 72.4 51 68.6
Lsat_1_v5_gn_8_62220 Lactuca sativa HOM05D004002 ORTHO05D004668 3.6e-10 68.2 51 66.7
Lsat_1_v5_gn_7_43900 Lactuca sativa HOM05D004002 ORTHO05D004668 1.4e-09 66.2 76 44.7
HanXRQChr09g0241521 Helianthus annuus HOM05D004002 ORTHO05D004668 1.8e-09 65.9 48 64.6
Actinidia21966 Actinidia chinensis HOM05D004002 ORTHO05D004668 2.3e-09 65.5 67 53.7
CANSAT11G1469 Cannabis sativa HOM05D004002 ORTHO05D004668 2.3e-09 65.5 67 53.7
CDE03G0124 Ceratophyllum demersum HOM05D004002 ORTHO05D004668 2.3e-09 65.5 48 64.6
ECA240G2868 Erigeron canadensis HOM05D004002 ORTHO05D004668 2.3e-09 65.5 76 43.4
ClCG06G011370 Citrullus lanatus HOM05D004002 ORTHO05D004668 3.9e-09 64.7 48 64.6
HanXRQChr14g0442601 Helianthus annuus HOM05D001057 ORTHO05D002028 3.9e-09 64.7 37 91.9
HanXRQChr14g0442631 Helianthus annuus HOM05D001057 ORTHO05D002028 3.9e-09 64.7 37 91.9
Prupe.7G246700 Prunus persica HOM05D004002 ORTHO05D004668 3.9e-09 64.7 48 66.7
Ciclev10007259m.g Citrus clementina HOM05D004002 ORTHO05D004668 6.7e-09 63.9 51 58.8
MD15G1169800 Malus domestica HOM05D004002 ORTHO05D004668 6.7e-09 63.9 48 62.5
Sed0021658 Sechium edule HOM05D004002 ORTHO05D004668 6.7e-09 63.9 48 64.6
Aqoxy7G02288 Aquilegia oxysepala HOM05D004002 ORTHO05D004668 8.8e-09 63.5 67 55.2
Lj7C426G10 Lonicera japonica HOM05D004002 ORTHO05D004668 8.8e-09 63.5 48 66.7
MD02G1028100 Malus domestica HOM05D004002 ORTHO05D004668 8.8e-09 63.5 48 64.6
PSO017G4586 Papaver somniferum HOM05D004002 ORTHO05D004668 8.8e-09 63.5 48 68.8
Atru.chr7.1118 Acer truncatum HOM05D004002 ORTHO05D004668 1.1e-08 63.2 48 64.6
ECA236G2336 Erigeron canadensis HOM05D004002 ORTHO05D004668 1.1e-08 63.2 51 60.8
Eucgr.C04259 Eucalyptus grandis HOM05D004002 ORTHO05D004668 1.1e-08 63.2 83 47.0
MBI04_g29332_MAGBIO Magnolia biondii HOM05D004002 ORTHO05D004668 1.1e-08 63.2 69 53.6
RcHm_v2.0_Chr2g0087941 Rosa chinensis HOM05D004002 ORTHO05D004668 1.1e-08 63.2 48 64.6
Hund26527 Selenicereus undatus HOM05D004002 ORTHO05D004668 1.1e-08 63.2 48 62.5
Cfa003405 Carpinus fangiana HOM05D004002 ORTHO05D004668 1.5e-08 62.8 48 66.7
CiPaw.03G246900 Carya illinoinensis HOM05D004002 ORTHO05D004668 1.5e-08 62.8 48 62.5
Lj4g0004437 Lotus japonicus HOM05D004002 ORTHO05D004668 1.5e-08 62.8 83 45.8
Manes.14G114600 Manihot esculenta HOM05D004002 ORTHO05D004668 1.5e-08 62.8 48 62.5
QL02p089511 Quercus lobata HOM05D004002 ORTHO05D004668 1.5e-08 62.8 67 50.7
PSO170G6007 Papaver somniferum HOM05D004002 ORTHO05D004668 1.9e-08 62.4 48 66.7
ATR1120G180 Amborella trichopoda HOM05D004002 ORTHO05D004668 2.5e-08 62.0 69 50.7
AUR62011160 Chenopodium quinoa HOM05D004002 ORTHO05D004668 2.5e-08 62.0 48 62.5
AUR62013328 Chenopodium quinoa HOM05D004002 ORTHO05D004668 2.5e-08 62.0 48 62.5
DCAR_014896 Daucus carota HOM05D004002 ORTHO05D004668 2.5e-08 62.0 67 46.3
Lalb_Chr13g0301701 Lupinus albus HOM05D004002 ORTHO05D004668 2.5e-08 62.0 67 50.7
TAR636G2372 Trochodendron aralioides HOM05D004002 ORTHO05D004668 2.5e-08 62.0 48 66.7
FvH4_1g02820 Fragaria vesca HOM05D004002 ORTHO05D004668 3.3e-08 61.6 48 62.5
FAN19G2815 Fragaria x ananassa HOM05D004002 ORTHO05D004668 3.3e-08 61.6 48 62.5
FAN23G1361 Fragaria x ananassa HOM05D004002 ORTHO05D004668 3.3e-08 61.6 48 62.5
FAN23G2019 Fragaria x ananassa HOM05D004002 ORTHO05D004668 3.3e-08 61.6 48 62.5
FAN26G1964 Fragaria x ananassa HOM05D004002 ORTHO05D004668 3.3e-08 61.6 48 62.5
FAN28G1420 Fragaria x ananassa HOM05D004002 ORTHO05D004668 3.3e-08 61.6 48 62.5
HPP92_024596 Vanilla planifolia HOM05D004002 ORTHO05D004668 3.3e-08 61.6 48 66.7
Haze_25542 Corylus avellana HOM05D004002 ORTHO05D004668 4.3e-08 61.2 48 64.6
Dinv41488 Davidia involucrata HOM05D004002 ORTHO05D004668 4.3e-08 61.2 48 64.6
Rhsim01G0066800 Rhododendron simsii HOM05D004002 ORTHO05D004668 4.3e-08 61.2 67 50.7
Sed0028143 Sechium edule HOM05D004002 ORTHO05D004668 4.3e-08 61.2 48 62.5
MELO3C010320.2 Cucumis melo HOM05D004002 ORTHO05D004668 5.7e-08 60.8 48 58.3
CsaV3_1G030400 Cucumis sativus L. HOM05D004002 ORTHO05D004668 5.7e-08 60.8 48 58.3
CsaV3_UNG026150 Cucumis sativus L. HOM05D004002 ORTHO05D004668 5.7e-08 60.8 48 58.3
Gohir.A08G238400 Gossypium hirsutum HOM05D004002 ORTHO05D004668 5.7e-08 60.8 67 50.7
Potri.018G128400 Populus trichocarpa HOM05D004002 ORTHO05D004668 5.7e-08 60.8 48 62.5
SalBow1G7082 Salvia bowleyana HOM05D004002 ORTHO05D004668 5.7e-08 60.8 48 62.5
Thecc.09G129800 Theobroma cacao HOM05D004002 ORTHO05D004668 5.7e-08 60.8 48 64.6
vmacro20578 Vaccinium macrocarpon HOM05D004002 ORTHO05D004668 5.7e-08 60.8 67 50.7
MSTRG.26413 Avicennia marina HOM05D004002 ORTHO05D004668 7.4e-08 60.5 48 60.4
Cc06_g08210 Coffea canephora HOM05D004002 ORTHO05D004668 7.4e-08 60.5 48 64.6
COL.COLO4_35123 Corchorus olitorius HOM05D004002 ORTHO05D004668 7.4e-08 60.5 48 64.6
DCAR_010315 Daucus carota HOM05D004002 ORTHO05D004668 7.4e-08 60.5 67 47.8
Duzib187G1937 Durio zibethinus HOM05D004002 ORTHO05D004668 7.4e-08 60.5 48 62.5
Migut.K00437 Erythranthe guttata HOM05D004002 ORTHO05D004668 7.4e-08 60.5 45 64.4
Gohir.D08G259100 Gossypium hirsutum HOM05D004002 ORTHO05D004668 7.4e-08 60.5 67 50.7
Gorai.004G276600 Gossypium raimondii HOM05D004002 ORTHO05D004668 7.4e-08 60.5 67 50.7
Aa31LG4G12760 Aethionema arabicum HOM05D004002 ORTHO05D004668 9.7e-08 60.1 49 61.2
arahy.Tifrunner.gnm1.ann1.R22NLQ Arachis hypogaea HOM05D004002 ORTHO05D004668 9.7e-08 60.1 48 60.4
arahy.Tifrunner.gnm1.ann1.S50ZLM Arachis hypogaea HOM05D004002 ORTHO05D004668 9.7e-08 60.1 48 60.4
Glyma.13G158400 Glycine max HOM05D004002 ORTHO05D004668 9.7e-08 60.1 48 60.4
Phvul.003G167101 Phaseolus vulgaris HOM05D004002 ORTHO05D004668 9.7e-08 60.1 48 60.4
SGA_v2.0_scaffold109G31044 Striga asiatica HOM05D004002 ORTHO05D004668 9.7e-08 60.1 48 58.3
VMungo1215G3423 Vigna mungo HOM05D004002 ORTHO05D004668 9.7e-08 60.1 77 45.5
GSVIVG01015557001 Vitis vinifera HOM05D004002 ORTHO05D004668 9.7e-08 60.1 48 64.6
CAN.G138.14 Capsicum annuum HOM05D004002 ORTHO05D004668 1.3e-07 59.7 67 46.3
Duzib168G0398 Durio zibethinus HOM05D004002 ORTHO05D004668 1.3e-07 59.7 48 62.5
Thhalv10011188m.g Eutrema salsugineum HOM05D004002 ORTHO05D004668 1.7e-07 59.3 48 62.5
Peaxi162Scf00891g00220 Petunia axillaris HOM05D004002 ORTHO05D004668 1.7e-07 59.3 67 47.8
Sp1g41730 Schrenkiella parvula HOM05D004002 ORTHO05D004668 1.7e-07 59.3 48 62.5
EL10Ac8g18695 Beta vulgaris HOM05D004002 ORTHO05D004668 2.2e-07 58.9 48 56.2
BcaB07g33169 Brassica carinata HOM05D004002 ORTHO05D004668 2.2e-07 58.9 48 60.4
BcaC08g43677 Brassica carinata HOM05D004002 ORTHO05D004668 2.2e-07 58.9 48 60.4
C06p10960 Brassica napus HOM05D004002 ORTHO05D004668 2.2e-07 58.9 48 60.4
BolC6t36178H Brassica oleracea HOM05D004002 ORTHO05D004668 2.2e-07 58.9 48 60.4
BraSC56t46385Z Brassica rapa HOM05D004002 ORTHO05D004668 2.2e-07 58.9 48 60.4
Gohir.A07G036800 Gossypium hirsutum HOM05D004002 ORTHO05D004668 2.2e-07 58.9 51 56.9
Gohir.D07G040800 Gossypium hirsutum HOM05D004002 ORTHO05D004668 2.2e-07 58.9 51 56.9
Gorai.001G043400 Gossypium raimondii HOM05D004002 ORTHO05D004668 2.2e-07 58.9 51 56.9
Nn2g12080 Nelumbo nucifera HOM05D004002 ORTHO05D004668 2.2e-07 58.9 48 64.6
Ca_06931_v3 Cicer arietinum L. HOM05D004002 ORTHO05D004668 2.8e-07 58.5 48 58.3
Ca_30460_v3 Cicer arietinum L. HOM05D004002 ORTHO05D004668 2.8e-07 58.5 48 58.3
Psat4g037880 Pisum sativum HOM05D004002 ORTHO05D004668 2.8e-07 58.5 48 58.3
SHI03370 Sapria himalayana HOM05D004002 ORTHO05D000023 2.8e-07 58.5 48 64.6
Sc18g0000460 Simmondsia chinensis HOM05D004002 ORTHO05D004668 2.8e-07 58.5 48 54.2
TWI32G0682 Tripterygium wilfordii HOM05D004002 ORTHO05D004668 2.8e-07 58.5 66 48.5
Sopen07g003960 Solanum pennellii HOM05D004002 ORTHO05D004668 3.7e-07 58.2 67 46.3
Nitab4.5_0000028g0120 Nicotiana tabacum HOM05D004002 ORTHO05D004668 4.8e-07 57.8 67 46.3
Nitab4.5_0001776g0030 Nicotiana tabacum HOM05D004002 ORTHO05D004668 4.8e-07 57.8 67 46.3
THA.LOC104808973 Tarenaya hassleriana HOM05D004002 ORTHO05D004668 4.8e-07 57.8 67 50.7
AL5G20770 Arabidopsis lyrata HOM05D004002 ORTHO05D004668 6.3e-07 57.4 48 60.4
AT2G26610 Arabidopsis thaliana HOM05D004002 ORTHO05D004668 6.3e-07 57.4 48 62.5
AT3G33530 Arabidopsis thaliana HOM05D004002 ORTHO05D004668 6.3e-07 57.4 48 60.4
Sabra18G0109200 Salix brachista HOM05D004002 ORTHO05D004668 6.3e-07 57.4 48 60.4
BcaB01g03030 Brassica carinata HOM05D004002 ORTHO05D004668 8.2e-07 57.0 48 62.5
BcaC01g04911 Brassica carinata HOM05D004002 ORTHO05D004668 8.2e-07 57.0 48 62.5
A03p26850 Brassica napus HOM05D004002 ORTHO05D004668 8.2e-07 57.0 48 62.5
C03p32190 Brassica napus HOM05D004002 ORTHO05D004668 8.2e-07 57.0 48 62.5
BolC3t15561H Brassica oleracea HOM05D004002 ORTHO05D004668 8.2e-07 57.0 48 62.5
BraA03t11897Z Brassica rapa HOM05D004002 ORTHO05D004668 8.2e-07 57.0 48 62.5
Carub.0016s0010 Capsella rubella HOM05D004002 ORTHO05D004668 8.2e-07 57.0 48 58.3
Medtr4g114930 Medicago truncatula HOM05D004002 ORTHO05D004668 8.2e-07 57.0 48 56.2
TPR.G26484 Trifolium pratense HOM05D004002 ORTHO05D004668 8.2e-07 57.0 48 58.3
Aa31LG5G9160 Aethionema arabicum HOM05D004002 ORTHO05D004668 1.1e-06 56.6 69 49.3
THA.LOC104811026 Tarenaya hassleriana HOM05D004002 ORTHO05D004668 1.4e-06 56.2 48 58.3
Ah.09g225140 Amaranthus hybridus HOM05D004002 ORTHO05D004668 1.8e-06 55.8 67 47.8
Cpa.g.sc46.23 Carica papaya HOM05D004002 ORTHO05D004668 1.8e-06 55.8 48 60.4
unitig_748.g7159 Utricularia gibba HOM05D004002 ORTHO05D004668 1.8e-06 55.8 51 52.9
AL4G19600 Arabidopsis lyrata HOM05D004002 ORTHO05D004668 2.4e-06 55.5 48 60.4
Lalb_Chr12g0198051 Lupinus albus HOM05D004002 ORTHO05D004668 3.1e-06 55.1 48 54.2
Carub.0004s0687 Capsella rubella HOM05D004002 ORTHO05D004668 4.1e-06 54.7 48 58.3
Zm00001eb231770 Zea mays HOM05D004002 ORTHO05D004668 4.1e-06 54.7 48 56.2
Lsat_1_v5_gn_0_22321 Lactuca sativa HOM05D001057 ORTHO05D002028 5.3e-06 54.3 37 73.0