Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0064731 Helianthus annuus HOM05D007987 ORTHO05D010121 1.9e-203 712.2 344 100.0
HanXRQChr03g0064631 Helianthus annuus HOM05D007987 ORTHO05D010121 5.6e-163 577.8 283 97.5
Lsat_1_v5_gn_7_49141 Lactuca sativa HOM05D007987 ORTHO05D010121 2.3e-161 572.4 346 79.8
ECA240G3409 Erigeron canadensis HOM05D007987 ORTHO05D010121 2.5e-155 552.4 348 76.7
Cfa008728 Carpinus fangiana HOM05D007987 ORTHO05D010121 2.7e-133 479.2 307 71.7
CiPaw.05G167600 Carya illinoinensis HOM05D007987 ORTHO05D010121 4.6e-133 478.4 328 68.3
Potri.010G169900 Populus trichocarpa HOM05D007987 ORTHO05D010121 9.6e-131 470.7 288 74.3
Thecc.10G034800 Theobroma cacao HOM05D007987 ORTHO05D010121 9.0e-129 464.2 293 72.4
Duzib114G0697 Durio zibethinus HOM05D007987 ORTHO05D010121 2.0e-128 463.0 293 71.0
Rhsim04G0167600 Rhododendron simsii HOM05D007987 ORTHO05D010121 2.6e-128 462.6 309 69.9
Gohir.A10G223200 Gossypium hirsutum HOM05D007987 ORTHO05D010121 3.4e-128 462.2 303 68.3
CAN.G666.15 Capsicum annuum HOM05D007987 ORTHO05D010121 2.2e-127 459.5 308 70.1
Nitab4.5_0001001g0020 Nicotiana tabacum HOM05D007987 ORTHO05D010121 2.2e-127 459.5 337 65.3
Gorai.011G269300 Gossypium raimondii HOM05D007987 ORTHO05D010121 2.9e-127 459.1 303 68.3
Hma1.2p1_0285F.1_g113960 Hydrangea macrophylla HOM05D007987 ORTHO05D010121 4.9e-127 458.4 309 70.6
Sabra10G0129700 Salix brachista HOM05D007987 ORTHO05D010121 4.9e-127 458.4 305 70.5
Gohir.D10G235600 Gossypium hirsutum HOM05D007987 ORTHO05D010121 7.1e-126 454.5 303 68.0
Peaxi162Scf00818g00124 Petunia axillaris HOM05D007987 ORTHO05D010121 7.1e-126 454.5 336 66.4
COL.COLO4_25518 Corchorus olitorius HOM05D007987 ORTHO05D010121 1.3e-124 450.3 306 68.6
Gohir.A13G017700 Gossypium hirsutum HOM05D007987 ORTHO05D010121 1.8e-124 449.9 347 62.8
Gorai.013G020800 Gossypium raimondii HOM05D007987 ORTHO05D010121 6.7e-124 448.0 347 62.2
COL.COLO4_25506 Corchorus olitorius HOM05D007987 ORTHO05D010121 6.9e-121 438.0 287 69.7
PSO782G0248 Papaver somniferum HOM05D007987 ORTHO05D010121 5.8e-120 434.9 290 68.3
PSO063G6796 Papaver somniferum HOM05D007987 ORTHO05D010121 3.8e-119 432.2 301 67.1
SalBow2G3296 Salvia bowleyana HOM05D007987 ORTHO05D010121 3.8e-119 432.2 298 68.5
MBI06_g22351_MAGBIO Magnolia biondii HOM05D007987 ORTHO05D010121 3.2e-118 429.1 322 60.6
CiPaw.05G167500 Carya illinoinensis HOM05D007987 ORTHO05D010121 7.2e-118 427.9 263 75.7
THA.LOC104807169 Tarenaya hassleriana HOM05D007987 ORTHO05D010121 7.2e-118 427.9 330 61.8
ATR0618G174 Amborella trichopoda HOM05D007987 ORTHO05D010121 3.5e-117 425.6 330 62.1
unitig_699.g19972 Utricularia gibba HOM05D007987 ORTHO05D010121 4.6e-117 425.2 306 64.1
C01p05130 Brassica napus HOM05D007987 ORTHO05D010121 6.1e-117 424.9 297 64.0
Sp7g31280 Schrenkiella parvula HOM05D007987 ORTHO05D010121 2.3e-116 422.9 302 63.9
A01p04720 Brassica napus HOM05D007987 ORTHO05D010121 3.0e-116 422.5 301 64.1
BcaC09g52171 Brassica carinata HOM05D007987 ORTHO05D010121 3.9e-116 422.2 285 67.0
Haze_20414 Corylus avellana HOM05D007987 ORTHO05D010121 6.7e-116 421.4 341 60.7
Carub.0007s0691 Capsella rubella HOM05D007987 ORTHO05D010121 1.9e-115 419.9 318 61.3
BolC1t00493H Brassica oleracea HOM05D007987 ORTHO05D010121 2.5e-115 419.5 297 63.3
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 2.5e-115 419.5 314 64.0
Eucgr.J00842 Eucalyptus grandis HOM05D007987 ORTHO05D010121 5.7e-115 418.3 294 65.0
Lj6A722G91 Lonicera japonica HOM05D007987 ORTHO05D010121 6.3e-114 414.8 263 73.0
AT4G33540 Arabidopsis thaliana HOM05D007987 ORTHO05D010121 1.4e-113 413.7 318 60.1
Gohir.D13G018800 Gossypium hirsutum HOM05D007987 ORTHO05D010121 2.4e-113 412.9 322 62.4
AL7G17980 Arabidopsis lyrata HOM05D007987 ORTHO05D010121 4.1e-113 412.1 297 63.6
Os02g0829600 Oryza sativa ssp. japonica HOM05D007987 ORTHO05D010121 1.3e-111 407.1 284 62.3
CARHR241640 Cardamine hirsuta HOM05D007987 ORTHO05D010121 1.7e-111 406.8 285 65.3
Os02g0829500 Oryza sativa ssp. japonica HOM05D007987 ORTHO05D010121 8.5e-111 404.4 295 61.4
Thhalv10025570m.g Eutrema salsugineum HOM05D007987 ORTHO05D010121 5.5e-110 401.7 321 59.2
Hma1.2p1_1487F.1_g286560 Hydrangea macrophylla HOM05D007987 ORTHO05D010121 5.5e-110 401.7 260 73.1
Aa31sc280G10 Aethionema arabicum HOM05D007987 ORTHO05D010121 7.2e-110 401.4 278 64.0
BraA01t00455Z Brassica rapa HOM05D007987 ORTHO05D010121 1.2e-109 400.6 275 65.1
PSO782G2203 Papaver somniferum HOM05D007987 ORTHO05D010121 1.1e-105 387.5 305 60.0
PSO063G4427 Papaver somniferum HOM05D007987 ORTHO05D010121 9.1e-105 384.4 264 67.0
SMO364G0947 Selaginella moellendorffii HOM05D007987 ORTHO05D010121 2.0e-104 383.3 295 58.0
TWI77G0749 Tripterygium wilfordii HOM05D007987 ORTHO05D010121 3.4e-104 382.5 218 78.0
Pp3c22_8440 Physcomitrium patens HOM05D007987 ORTHO05D010121 1.4e-100 370.5 323 56.7
Eucgr.J00841 Eucalyptus grandis HOM05D007987 ORTHO05D010121 8.8e-100 367.9 269 64.3
Mapoly0022s0013 Marchantia polymorpha HOM05D007987 ORTHO05D010121 4.8e-98 362.1 281 57.3
Haze_20417 Corylus avellana HOM05D007987 ORTHO05D010121 9.1e-97 357.8 274 64.2
SEGI_07326 Sequoiadendron giganteum HOM05D007987 ORTHO05D010121 3.2e-94 349.4 310 51.0
Gohir.D10G235824 Gossypium hirsutum HOM05D007987 ORTHO05D010121 1.8e-76 290.4 183 71.0
Mapoly0022s0011 Marchantia polymorpha HOM05D007987 ORTHO05D010121 5.7e-75 285.4 269 49.8
Zm00001eb190660 Zea mays HOM05D007987 ORTHO05D010121 2.3e-71 273.5 176 68.2
Cre24.g755847 Chlamydomonas reinhardtii HOM05D007987 ORTHO05D010121 1.7e-63 247.3 390 36.7
SMO364G0577 Selaginella moellendorffii HOM05D007987 ORTHO05D010121 4.7e-61 239.2 219 52.1
AagrBONN_evm.TU.Sc2ySwM_344.3455 Anthoceros agrestis HOM05D007987 ORTHO05D010121 8.6e-55 218.4 172 58.7
DCAR_026913 Daucus carota HOM05D007987 ORTHO05D010121 4.6e-40 169.5 118 65.3
DCAR_026914 Daucus carota HOM05D007987 ORTHO05D010121 3.0e-39 166.8 131 67.2
SEGI_17347 Sequoiadendron giganteum HOM05D007987 ORTHO05D010121 1.1e-33 148.3 129 55.8
AagrBONN_evm.TU.Sc2ySwM_344.3454 Anthoceros agrestis HOM05D007987 ORTHO05D010121 9.3e-33 145.2 157 43.9
MSTRG.434 Avicennia marina HOM05D007987 ORTHO05D010121 6.0e-32 142.5 100 69.0
PRCOL_00006988 Prasinoderma coloniale HOM05D007987 ORTHO05D010121 9.6e-30 135.2 216 37.5
THA.LOC104807823 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 9.6e-22 108.6 81 64.2
AagrBONN_evm.TU.Sc2ySwM_344.3456 Anthoceros agrestis HOM05D007987 ORTHO05D010121 1.3e-21 108.2 127 40.9
SEGI_34693 Sequoiadendron giganteum HOM05D007987 ORTHO05D010121 1.2e-19 101.7 86 54.7
SEGI_01816 Sequoiadendron giganteum HOM05D007987 ORTHO05D010121 5.1e-15 86.3 58 67.2
SEGI_35505 Sequoiadendron giganteum HOM05D007987 ORTHO05D010121 1.4e-09 68.2 71 47.9
Sopen02g001700 Solanum pennellii HOM05D007987 ORTHO05D010121 2.7e-08 63.9 27 88.9


User provided reference genes

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