Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0063891 Helianthus annuus HOM05D000005 ORTHO05D000012 2.0e-126 455.7 216 100.0
Lsat_1_v5_gn_7_66420 Lactuca sativa HOM05D000005 ORTHO05D000012 2.0e-81 306.2 215 68.4
Lsat_1_v5_gn_9_61900 Lactuca sativa HOM05D000005 ORTHO05D000012 9.2e-79 297.4 215 66.5
ECA240G4821 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.2e-78 297.0 214 65.0
ECA232G2832 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.3e-77 292.7 211 68.7
HanXRQChr05g0149501 Helianthus annuus HOM05D000431 ORTHO05D000012 1.1e-76 290.4 212 66.5
Lsat_1_v5_gn_7_46620 Lactuca sativa HOM05D000005 ORTHO05D000012 3.3e-76 288.9 216 64.4
HanXRQChr02g0052061 Helianthus annuus HOM05D000614 ORTHO05D000463 5.6e-76 288.1 215 65.6
HanXRQChr09g0243991 Helianthus annuus HOM05D000005 ORTHO05D000012 7.3e-76 287.7 208 67.3
HanXRQChr09g0243171 Helianthus annuus HOM05D000005 ORTHO05D000012 1.6e-75 286.6 212 67.5
Lsat_1_v5_gn_7_46580 Lactuca sativa HOM05D000005 ORTHO05D000012 2.1e-75 286.2 216 65.3
Lsat_1_v5_gn_7_48101 Lactuca sativa HOM05D000005 ORTHO05D000012 2.1e-75 286.2 210 64.3
Lsat_1_v5_gn_7_35540 Lactuca sativa HOM05D000005 ORTHO05D000012 6.1e-75 284.6 216 65.7
Lsat_1_v5_gn_9_61840 Lactuca sativa HOM05D000005 ORTHO05D000012 8.0e-75 284.3 216 63.9
Lsat_1_v5_gn_5_78281 Lactuca sativa HOM05D000005 ORTHO05D000012 4.0e-74 282.0 216 63.9
Lsat_1_v5_gn_7_48240 Lactuca sativa HOM05D000005 ORTHO05D000012 1.5e-73 280.0 215 63.7
HanXRQChr09g0243151 Helianthus annuus HOM05D000005 ORTHO05D000012 5.7e-73 278.1 208 67.3
Lsat_1_v5_gn_9_123641 Lactuca sativa HOM05D000005 ORTHO05D000012 5.7e-73 278.1 216 64.8
Lsat_1_v5_gn_7_48161 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-72 276.9 215 62.3
Lsat_1_v5_gn_1_92800 Lactuca sativa HOM05D001302 ORTHO05D001107 1.7e-72 276.6 216 63.0
Lsat_1_v5_gn_1_77280 Lactuca sativa HOM05D000005 ORTHO05D000012 8.3e-72 274.2 215 61.9
HanXRQChr09g0244041 Helianthus annuus HOM05D000041 ORTHO05D000012 4.6e-70 268.5 215 63.7
Lsat_1_v5_gn_1_92860 Lactuca sativa HOM05D000005 ORTHO05D000012 3.9e-69 265.4 197 66.0
Lsat_1_v5_gn_9_123601 Lactuca sativa HOM05D000529 ORTHO05D000472 1.9e-68 263.1 203 65.5
Lsat_1_v5_gn_7_48140 Lactuca sativa HOM05D000005 ORTHO05D000012 6.8e-66 254.6 215 59.5
ECA240G2892 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.2e-58 228.4 219 52.1
ECA240G4574 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.5e-57 226.9 210 53.8
HanXRQChr09g0243181 Helianthus annuus HOM05D000005 ORTHO05D000012 9.8e-57 224.2 165 68.5
ECA240G4048 Erigeron canadensis HOM05D000005 ORTHO05D000767 1.1e-55 220.7 219 51.1
HanXRQChr12g0361091 Helianthus annuus HOM05D000005 ORTHO05D000012 4.1e-55 218.8 213 55.4
ECA240G0836 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.9e-52 209.9 212 53.3
ECA240G0420 Erigeron canadensis HOM05D000794 ORTHO05D000012 2.2e-48 196.4 184 52.7
HanXRQChr09g0243131 Helianthus annuus HOM05D000041 ORTHO05D000452 3.2e-47 192.6 137 67.9
Lsat_1_v5_gn_7_48201 Lactuca sativa HOM05D000005 ORTHO05D000012 1.5e-44 183.7 213 48.4
Lsat_1_v5_gn_9_96901 Lactuca sativa HOM05D000005 ORTHO05D000012 1.8e-42 176.8 206 48.5
Lsat_1_v5_gn_7_48041 Lactuca sativa HOM05D000005 ORTHO05D000012 3.1e-42 176.0 221 46.2
ECA240G4524 Erigeron canadensis HOM05D000005 ORTHO05D000294 3.8e-40 169.1 242 40.9
Lsat_1_v5_gn_7_48220 Lactuca sativa HOM05D000005 ORTHO05D000012 2.1e-38 163.3 164 55.5
Lsat_1_v5_gn_7_44940 Lactuca sativa HOM05D000005 ORTHO05D000012 4.6e-38 162.2 226 42.5
Lsat_1_v5_gn_7_46640 Lactuca sativa HOM05D000005 ORTHO05D000012 3.0e-37 159.5 217 43.3
Lsat_1_v5_gn_7_44840 Lactuca sativa HOM05D000005 ORTHO05D000012 1.9e-36 156.8 201 43.8
Lsat_1_v5_gn_7_46720 Lactuca sativa HOM05D000005 ORTHO05D000012 1.9e-36 156.8 214 43.0
Lsat_1_v5_gn_7_46600 Lactuca sativa HOM05D000005 ORTHO05D000012 9.6e-36 154.5 202 45.0
ECA240G3485 Erigeron canadensis HOM05D000005 ORTHO05D000012 3.6e-35 152.5 208 44.2
ECA240G4344 Erigeron canadensis HOM05D000005 ORTHO05D000012 8.1e-35 151.4 209 43.5
HanXRQChr09g0240621 Helianthus annuus HOM05D000005 ORTHO05D000012 1.4e-34 150.6 212 43.4
HanXRQChr03g0063201 Helianthus annuus HOM05D000005 ORTHO05D000012 2.6e-33 146.4 204 42.6
ECA240G0122 Erigeron canadensis HOM05D000005 ORTHO05D000012 6.4e-32 141.7 227 41.4
HanXRQChr09g0241111 Helianthus annuus HOM05D000005 ORTHO05D000012 3.2e-31 139.4 221 39.8
HanXRQChr09g0241811 Helianthus annuus HOM05D000005 ORTHO05D000012 5.4e-31 138.7 219 41.6
HanXRQChr03g0063951 Helianthus annuus HOM05D000005 ORTHO05D000012 7.9e-30 134.8 212 40.6
HanXRQChr02g0050711 Helianthus annuus HOM05D000005 ORTHO05D000012 2.3e-29 133.3 212 38.2
HanXRQChr02g0050681 Helianthus annuus HOM05D000005 ORTHO05D000012 2.5e-28 129.8 212 37.7
HanXRQChr03g0064011 Helianthus annuus HOM05D000005 ORTHO05D000012 1.6e-27 127.1 183 43.7
HanXRQChr09g0245041 Helianthus annuus HOM05D000005 ORTHO05D000012 9.0e-26 121.3 214 37.4
HanXRQChr03g0060951 Helianthus annuus HOM05D000005 ORTHO05D000012 6.0e-22 108.6 168 39.3
Prupe.8G184900 Prunus persica HOM05D000005 ORTHO05D000012 7.9e-22 108.2 189 33.3
Dinv38457 Davidia involucrata HOM05D010983 ORTHO05D000012 3.9e-21 105.9 209 35.9
CSS0034467 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.7e-21 105.1 208 31.7
Dinv38450 Davidia involucrata HOM05D000005 ORTHO05D000012 1.5e-20 104.0 193 35.8
HanXRQChr11g0343871 Helianthus annuus HOM05D000005 ORTHO05D000012 2.5e-20 103.2 127 44.9
Peaxi162Scf00000g00052 Petunia axillaris HOM05D000005 ORTHO05D000012 1.3e-19 100.9 209 32.1
CSS0031862 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.8e-19 99.8 193 30.6
Dinv38448 Davidia involucrata HOM05D000005 ORTHO05D000012 2.8e-19 99.8 209 34.9
Manes.11G061000 Manihot esculenta HOM05D000005 ORTHO05D000012 3.7e-19 99.4 175 33.1
Dinv38451 Davidia involucrata HOM05D000005 ORTHO05D000012 4.8e-19 99.0 208 33.7
Dinv38462 Davidia involucrata HOM05D000005 ORTHO05D000012 4.0e-18 95.9 174 39.1
MD07G1112300 Malus domestica HOM05D000005 ORTHO05D000012 9.0e-18 94.7 203 31.0
Lsat_1_v5_gn_9_58521 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-17 94.4 178 34.3
Dinv29687 Davidia involucrata HOM05D000005 ORTHO05D000012 1.5e-17 94.0 174 38.5
PGSC0003DMG400013094 Solanum tuberosum HOM05D000005 ORTHO05D000012 1.5e-17 94.0 207 31.4
CSS0009639 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.0e-17 93.6 199 31.2
MD05G1152200 Malus domestica HOM05D000005 ORTHO05D000012 2.6e-17 93.2 193 34.2
Actinidia00144 Actinidia chinensis HOM05D000005 ORTHO05D000012 4.5e-17 92.4 172 36.6
CAN.G1372.1 Capsicum annuum HOM05D000005 ORTHO05D000012 4.5e-17 92.4 210 31.4
Solyc02g032650.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 5.8e-17 92.0 178 35.4
Dinv01685 Davidia involucrata HOM05D000005 ORTHO05D000012 1.0e-16 91.3 209 32.5
Sopen01g045300 Solanum pennellii HOM05D000005 ORTHO05D000012 2.2e-16 90.1 177 36.2
Dinv00400 Davidia involucrata HOM05D000005 ORTHO05D000012 2.9e-16 89.7 183 36.1
Lsat_1_v5_gn_8_114401 Lactuca sativa HOM05D000005 ORTHO05D000012 2.9e-16 89.7 179 32.4
Dinv38459 Davidia involucrata HOM05D000005 ORTHO05D000012 3.8e-16 89.4 134 42.5
Dinv29640 Davidia involucrata HOM05D000005 ORTHO05D000012 6.5e-16 88.6 203 30.5
Dinv29641 Davidia involucrata HOM05D000005 ORTHO05D000012 6.5e-16 88.6 206 29.1
MD07G1103200 Malus domestica HOM05D000005 ORTHO05D000012 8.4e-16 88.2 212 33.0
Nitab4.5_0001085g0170 Nicotiana tabacum HOM05D000005 ORTHO05D000012 8.4e-16 88.2 175 37.7
Peaxi162Scf01000g00019 Petunia axillaris HOM05D000005 ORTHO05D000012 8.4e-16 88.2 175 33.7
Dinv29649 Davidia involucrata HOM05D000005 ORTHO05D000012 1.1e-15 87.8 196 32.7
CSS0040509 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.4e-15 87.4 174 35.6
Lj3C725T19 Lonicera japonica HOM05D000005 ORTHO05D000012 1.4e-15 87.4 176 30.1
PGSC0003DMG400013098 Solanum tuberosum HOM05D000005 ORTHO05D000012 1.9e-15 87.0 189 34.4
CAN.G1372.3 Capsicum annuum HOM05D000005 ORTHO05D000012 3.2e-15 86.3 176 33.5
HanXRQChr09g0240701 Helianthus annuus HOM05D000005 ORTHO05D000012 4.2e-15 85.9 97 46.4
Manes.06G012900 Manihot esculenta HOM05D000005 ORTHO05D000012 4.2e-15 85.9 188 31.9
Peaxi162Scf00194g01013 Petunia axillaris HOM05D000005 ORTHO05D000012 7.1e-15 85.1 175 34.3
Lsat_1_v5_gn_8_112140 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-14 84.3 178 33.1
Lsat_1_v5_gn_8_112841 Lactuca sativa HOM05D000005 ORTHO05D000012 1.6e-14 84.0 182 29.7
Dinv29646 Davidia involucrata HOM05D000005 ORTHO05D000012 2.1e-14 83.6 180 36.1
Sopen02g010920 Solanum pennellii HOM05D000005 ORTHO05D000012 2.7e-14 83.2 168 33.9
Prupe.6G083200 Prunus persica HOM05D000005 ORTHO05D000012 6.0e-14 82.0 187 34.2
Manes.09G158500 Manihot esculenta HOM05D000005 ORTHO05D000012 1.3e-13 80.9 199 27.6
Dinv38455 Davidia involucrata HOM05D000005 ORTHO05D000012 1.8e-13 80.5 161 31.7
Nitab4.5_0001085g0160 Nicotiana tabacum HOM05D000005 ORTHO05D000012 1.8e-13 80.5 165 28.5
MD05G1140100 Malus domestica HOM05D000005 ORTHO05D000012 2.3e-13 80.1 214 30.8
MD08G1019400 Malus domestica HOM05D000005 ORTHO05D000012 3.0e-13 79.7 178 30.9
MD11G1112400 Malus domestica HOM05D000005 ORTHO05D000012 3.9e-13 79.3 139 38.1
Nitab4.5_0006159g0020 Nicotiana tabacum HOM05D000005 ORTHO05D000012 3.9e-13 79.3 165 28.5
CAN.G1372.2 Capsicum annuum HOM05D000005 ORTHO05D000012 1.1e-12 77.8 166 28.9
MD17G1072500 Malus domestica HOM05D000005 ORTHO05D000012 1.1e-12 77.8 178 30.9
RcHm_v2.0_Chr1g0346831 Rosa chinensis HOM05D000005 ORTHO05D000012 1.5e-12 77.4 184 30.4
Solyc01g102880.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 1.9e-12 77.0 135 33.3
CSS0002987 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 7.4e-12 75.1 205 29.3
Lsat_1_v5_gn_8_114481 Lactuca sativa HOM05D000005 ORTHO05D000012 7.4e-12 75.1 135 33.3
RcHm_v2.0_Chr1g0348381 Rosa chinensis HOM05D000005 ORTHO05D000012 7.4e-12 75.1 180 30.0
Sopen01g045290 Solanum pennellii HOM05D000005 ORTHO05D000012 7.4e-12 75.1 135 32.6
Dinv38447 Davidia involucrata HOM05D000005 ORTHO05D000012 9.6e-12 74.7 116 38.8
MD15G1416500 Malus domestica HOM05D000005 ORTHO05D000012 9.6e-12 74.7 182 31.9
Lsat_1_v5_gn_1_80280 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-11 74.3 209 29.7
Lsat_1_v5_gn_1_102180 Lactuca sativa HOM05D000005 ORTHO05D000012 2.1e-11 73.6 208 30.3
FvH4_7g10510 Fragaria vesca HOM05D000005 ORTHO05D000012 2.8e-11 73.2 214 25.7
Lsat_1_v5_gn_1_80040 Lactuca sativa HOM05D000005 ORTHO05D000012 3.7e-11 72.8 176 34.7
CSS0014612 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.8e-11 72.4 147 32.0
Lsat_1_v5_gn_1_101181 Lactuca sativa HOM05D000005 ORTHO05D000012 6.3e-11 72.0 214 30.4
Prupe.2G126600 Prunus persica HOM05D000005 ORTHO05D000012 6.3e-11 72.0 146 34.2
MD08G1019200 Malus domestica HOM05D000005 ORTHO05D000012 8.2e-11 71.6 178 28.7
Prupe.2G126400 Prunus persica HOM05D000005 ORTHO05D000012 8.2e-11 71.6 209 30.1
RcHm_v2.0_Chr1g0348431 Rosa chinensis HOM05D000005 ORTHO05D000012 1.1e-10 71.2 237 27.8
FvH4_7g10520 Fragaria vesca HOM05D000005 ORTHO05D000012 1.4e-10 70.9 230 28.7
ECA248G0633 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.8e-10 70.5 190 28.9
RcHm_v2.0_Chr1g0348421 Rosa chinensis HOM05D000005 ORTHO05D000012 1.8e-10 70.5 237 27.0
Dinv38449 Davidia involucrata HOM05D000005 ORTHO05D000012 2.4e-10 70.1 127 35.4
Prupe.2G126300 Prunus persica HOM05D000005 ORTHO05D000012 2.4e-10 70.1 146 34.9
Prupe.6G083400 Prunus persica HOM05D000005 ORTHO05D000012 2.4e-10 70.1 149 34.2
Lsat_1_v5_gn_1_77560 Lactuca sativa HOM05D000005 ORTHO05D000012 4.1e-10 69.3 174 32.2
PGSC0003DMG400018216 Solanum tuberosum HOM05D000005 ORTHO05D000012 4.1e-10 69.3 133 30.1
Lsat_1_v5_gn_1_94701 Lactuca sativa HOM05D000005 ORTHO05D000012 6.9e-10 68.6 248 27.8
Lsat_1_v5_gn_1_101761 Lactuca sativa HOM05D000005 ORTHO05D000012 9.0e-10 68.2 178 32.0
Lsat_1_v5_gn_1_80300 Lactuca sativa HOM05D000005 ORTHO05D000012 9.0e-10 68.2 174 30.5
FvH4_7g10750 Fragaria vesca HOM05D000005 ORTHO05D000012 1.2e-09 67.8 122 35.2
FAN03G1873 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.2e-09 67.8 122 35.2
FAN06G2906 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.2e-09 67.8 122 35.2
ECA248G0107 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.0e-09 67.0 192 29.2
Lj9A250G10 Lonicera japonica HOM05D027184 ORTHO05D000012 2.0e-09 67.0 179 29.6
FAN06G4048 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.6e-09 66.6 190 24.2
Prupe.2G126100 Prunus persica HOM05D000005 ORTHO05D000012 2.6e-09 66.6 200 27.0
Dinv38461 Davidia involucrata HOM05D000005 ORTHO05D000012 4.5e-09 65.9 111 35.1
FAN03G2198 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.5e-09 65.9 195 28.7
Lj3P725T45 Lonicera japonica HOM05D000005 ORTHO05D000012 1.0e-08 64.7 78 34.6
Prupe.2G126900 Prunus persica HOM05D000005 ORTHO05D000012 1.0e-08 64.7 204 28.9
Lsat_1_v5_gn_1_102041 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-08 64.3 206 30.1
vmacro04573 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 1.3e-08 64.3 186 29.0
Lsat_1_v5_gn_1_77600 Lactuca sativa HOM05D000005 ORTHO05D000012 1.7e-08 63.9 194 27.3
Prupe.2G121000 Prunus persica HOM05D000005 ORTHO05D000012 1.7e-08 63.9 147 33.3
Cpa.g.sc4.91 Carica papaya HOM05D000005 ORTHO05D000012 2.2e-08 63.5 149 32.9
ECA240G4129 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.9e-08 63.2 133 35.3
HanXRQChr01g0016951 Helianthus annuus HOM05D000005 ORTHO05D000012 5.0e-08 62.4 182 30.2
HanXRQChr13g0403841 Helianthus annuus HOM05D000005 ORTHO05D000012 5.0e-08 62.4 184 29.3
MD07G1101700 Malus domestica HOM05D000005 ORTHO05D000012 5.0e-08 62.4 196 30.1
Cpa.g.sc4.82 Carica papaya HOM05D000005 ORTHO05D000012 1.1e-07 61.2 135 31.1
Nitab4.5_0013055g0010 Nicotiana tabacum HOM05D000005 ORTHO05D000012 1.9e-07 60.5 199 28.1
Lsat_1_v5_gn_1_91840 Lactuca sativa HOM05D000005 ORTHO05D000012 2.5e-07 60.1 189 27.0
MD04G1010700 Malus domestica HOM05D000005 ORTHO05D000012 2.5e-07 60.1 187 24.6
RcHm_v2.0_Chr1g0348411 Rosa chinensis HOM05D000005 ORTHO05D000012 2.5e-07 60.1 136 27.2
Prupe.2G126700 Prunus persica HOM05D000005 ORTHO05D000012 9.3e-07 58.2 144 31.9
MD08G1020500 Malus domestica HOM05D000005 ORTHO05D000012 1.2e-06 57.8 103 32.0
Lsat_1_v5_gn_1_91880 Lactuca sativa HOM05D000005 ORTHO05D000012 2.1e-06 57.0 201 25.9
Lsat_1_v5_gn_1_92080 Lactuca sativa HOM05D000005 ORTHO05D000012 2.1e-06 57.0 201 27.9
Lsat_1_v5_gn_1_101920 Lactuca sativa HOM05D000005 ORTHO05D000012 2.7e-06 56.6 186 30.6
Solyc01g102850.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 4.6e-06 55.8 202 24.8


User provided reference genes

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