Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0063371 Helianthus annuus HOM05D001419 ORTHO05D001376 1.2e-90 336.7 192 100.0
HanXRQChr08g0210371 Helianthus annuus HOM05D001419 ORTHO05D001376 1.4e-33 147.1 94 84.0
ECA233G5414 Erigeron canadensis HOM05D001419 ORTHO05D001376 1.8e-22 110.2 108 63.9
Lj6A836G34 Lonicera japonica HOM05D001419 ORTHO05D001376 3.0e-17 92.8 134 46.3
vmacro01028 Vaccinium macrocarpon HOM05D001419 ORTHO05D001376 9.8e-16 87.8 179 41.3
Actinidia30595 Actinidia chinensis HOM05D001419 ORTHO05D001376 4.1e-14 82.4 136 43.4
Sabra12G0077800 Salix brachista HOM05D001419 ORTHO05D001376 9.2e-14 81.3 155 43.2
MD06G1132600 Malus domestica HOM05D001419 ORTHO05D001376 1.2e-13 80.9 163 41.1
Haze_07114 Corylus avellana HOM05D001419 ORTHO05D001376 1.6e-13 80.5 158 39.2
DCAR_031210 Daucus carota HOM05D001419 ORTHO05D001376 2.0e-13 80.1 144 39.6
ClCG03G004000 Citrullus lanatus HOM05D001419 ORTHO05D001376 2.7e-13 79.7 168 38.1
FvH4_5g09200 Fragaria vesca HOM05D001419 ORTHO05D001376 3.5e-13 79.3 158 39.2
Lsat_1_v5_gn_8_146081 Lactuca sativa HOM05D001419 ORTHO05D001376 3.5e-13 79.3 114 48.2
Cfa018722 Carpinus fangiana HOM05D001419 ORTHO05D001376 4.5e-13 79.0 158 38.6
CSS0026667 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 1.3e-12 77.4 150 38.7
CSS0009563 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 2.9e-12 76.3 151 41.1
Peaxi162Scf00314g00524 Petunia axillaris HOM05D001419 ORTHO05D001376 3.8e-12 75.9 172 37.2
Prupe.1G217300 Prunus persica HOM05D001419 ORTHO05D001376 6.6e-12 75.1 149 42.3
QL10p000923 Quercus lobata HOM05D001419 ORTHO05D001376 6.6e-12 75.1 158 38.0
CSS0017420 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 8.6e-12 74.7 111 47.7
RcHm_v2.0_Chr7g0188961 Rosa chinensis HOM05D001419 ORTHO05D001376 1.9e-11 73.6 137 38.7
Solyc03g118390.3 Solanum lycopersicum HOM05D001419 ORTHO05D001376 5.6e-11 72.0 142 38.7
FAN13G1977 Fragaria x ananassa HOM05D001419 ORTHO05D001376 7.3e-11 71.6 170 36.5
Sopen03g037290 Solanum pennellii HOM05D001419 ORTHO05D001376 7.3e-11 71.6 142 38.7
Nitab4.5_0002116g0060 Nicotiana tabacum HOM05D001419 ORTHO05D001376 1.2e-10 70.9 150 38.0
FAN18G1957 Fragaria x ananassa HOM05D001419 ORTHO05D001376 1.6e-10 70.5 170 36.5
FAN04G1873 Fragaria x ananassa HOM05D001419 ORTHO05D001376 2.8e-10 69.7 157 37.6
FAN08G1260 Fragaria x ananassa HOM05D001419 ORTHO05D001376 2.8e-10 69.7 157 37.6
MD16G1129000 Malus domestica HOM05D001419 ORTHO05D001376 3.6e-10 69.3 162 38.3
LjContig00470g0006858 Lotus japonicus HOM05D001419 ORTHO05D001376 8.0e-10 68.2 124 42.7
SalBow5G0680 Salvia bowleyana HOM05D001419 ORTHO05D001376 8.0e-10 68.2 128 40.6
DCAR_021409 Daucus carota HOM05D001419 ORTHO05D001376 1.0e-09 67.8 143 46.9
Cc11_g15150 Coffea canephora HOM05D001419 ORTHO05D001376 1.4e-09 67.4 96 46.9
Rhsim08G0195700 Rhododendron simsii HOM05D001419 ORTHO05D001376 1.4e-09 67.4 161 39.8
MSTRG.8045 Avicennia marina HOM05D001419 ORTHO05D001376 1.8e-09 67.0 107 43.0
Migut.K01042 Erythranthe guttata HOM05D001419 ORTHO05D001376 2.3e-09 66.6 136 38.2
Prupe.5G143600 Prunus persica HOM05D001419 ORTHO05D001376 5.2e-09 65.5 150 43.3
FAN12G3369 Fragaria x ananassa HOM05D001419 ORTHO05D001376 8.9e-09 64.7 124 41.1
MD13G1129100 Malus domestica HOM05D001419 ORTHO05D001376 8.9e-09 64.7 156 38.5
SalBow2G2713 Salvia bowleyana HOM05D001419 ORTHO05D001376 8.9e-09 64.7 106 43.4
SalBow7G2196 Salvia bowleyana HOM05D001419 ORTHO05D001376 8.9e-09 64.7 106 43.4
Peaxi162Scf00128g01744 Petunia axillaris HOM05D001419 ORTHO05D001376 1.2e-08 64.3 147 37.4
Rhsim12G0180400 Rhododendron simsii HOM05D001419 ORTHO05D001376 1.5e-08 63.9 156 45.5
GSVIVG01004935001 Vitis vinifera HOM05D001419 ORTHO05D001376 2.0e-08 63.5 110 45.5
FAN07G2814 Fragaria x ananassa HOM05D001419 ORTHO05D001376 2.6e-08 63.2 124 41.1
Cpa.g.sc117.12 Carica papaya HOM05D001419 ORTHO05D001376 3.4e-08 62.8 79 41.8
TWI36G1167 Tripterygium wilfordii HOM05D001419 ORTHO05D001376 5.8e-08 62.0 133 36.1
Rhsim12G0018400 Rhododendron simsii HOM05D001419 ORTHO05D001376 7.5e-08 61.6 91 42.9
CiPaw.11G001500 Carya illinoinensis HOM05D001419 ORTHO05D001376 9.8e-08 61.2 103 40.8
MD14G1149000 Malus domestica HOM05D001419 ORTHO05D001376 9.8e-08 61.2 140 47.1
Manes.06G125500 Manihot esculenta HOM05D001419 ORTHO05D001376 1.3e-07 60.8 105 41.9
TAR629G0843 Trochodendron aralioides HOM05D001419 ORTHO05D001376 1.7e-07 60.5 77 49.4
Phvul.009G164500 Phaseolus vulgaris HOM05D001419 ORTHO05D001376 2.2e-07 60.1 103 44.7
CANSAT56G3001 Cannabis sativa HOM05D001419 ORTHO05D001376 3.7e-07 59.3 104 41.3
Dinv18818 Davidia involucrata HOM05D001419 ORTHO05D001376 3.7e-07 59.3 108 43.5
Hund02495 Selenicereus undatus HOM05D001419 ORTHO05D001376 3.7e-07 59.3 102 44.1
Nitab4.5_0000060g0030 Nicotiana tabacum HOM05D001419 ORTHO05D001376 4.9e-07 58.9 149 38.3
Oeu003272.3 Olea europaea HOM05D001419 ORTHO05D001376 6.4e-07 58.5 108 42.6
Actinidia22125 Actinidia chinensis HOM05D001419 ORTHO05D001376 8.3e-07 58.2 151 33.1
Ah.03g135620 Amaranthus hybridus HOM05D001419 ORTHO05D001376 1.4e-06 57.4 153 35.9
PGR119G0468 Punica granatum HOM05D001419 ORTHO05D001376 1.9e-06 57.0 99 43.4
Carub.0005s1503 Capsella rubella HOM05D001419 ORTHO05D001376 2.4e-06 56.6 106 37.7
Lalb_Chr08g0237471 Lupinus albus HOM05D001419 ORTHO05D001376 2.4e-06 56.6 106 43.4
Nn4g22170 Nelumbo nucifera HOM05D001419 ORTHO05D001376 2.4e-06 56.6 77 46.8
Dinv23208 Davidia involucrata HOM05D001419 ORTHO05D001376 3.2e-06 56.2 103 39.8
Gohir.D11G041500 Gossypium hirsutum HOM05D001419 ORTHO05D001376 3.2e-06 56.2 103 38.8
CSS0013744 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 4.1e-06 55.8 90 44.4
CSS0018390 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 4.1e-06 55.8 90 44.4
CsaV3_1G009890 Cucumis sativus L. HOM05D001419 ORTHO05D001376 4.1e-06 55.8 78 44.9
Gohir.A11G038200 Gossypium hirsutum HOM05D001419 ORTHO05D001376 4.1e-06 55.8 103 38.8
Manes.09G186800 Manihot esculenta HOM05D001419 ORTHO05D001376 5.4e-06 55.5 91 46.2
Aqoxy3G01878 Aquilegia oxysepala HOM05D001419 ORTHO05D001376 7.0e-06 55.1 90 45.6
AL5G28370 Arabidopsis lyrata HOM05D001419 ORTHO05D001376 7.0e-06 55.1 108 37.0
CDE05G2604 Ceratophyllum demersum HOM05D001419 ORTHO05D001376 7.0e-06 55.1 140 42.9
Aa31LG8G2550 Aethionema arabicum HOM05D000710 ORTHO05D000336 9.2e-06 54.7 106 38.7
arahy.Tifrunner.gnm1.ann1.EB1MMR Arachis hypogaea HOM05D001419 ORTHO05D001376 9.2e-06 54.7 103 35.9
Hma1.2p1_0168F.1_g074060 Hydrangea macrophylla HOM05D001419 ORTHO05D001376 9.2e-06 54.7 101 44.6
Manes.14G045900 Manihot esculenta HOM05D001419 ORTHO05D001376 9.2e-06 54.7 57 52.6
Sp5g13190 Schrenkiella parvula HOM05D001419 ORTHO05D001376 9.2e-06 54.7 101 39.6


User provided reference genes

Program Settings