Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 2.7e-95 352.1 186 100.0
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.5e-85 319.7 189 85.7
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 1.6e-84 316.2 190 83.7
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.6e-79 299.7 184 80.4
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 8.2e-68 260.8 189 69.3
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 1.4e-67 260.0 188 68.6
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 3.8e-65 251.9 188 65.4
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.7e-63 245.7 192 65.1
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.7e-63 245.7 192 65.6
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 6.1e-63 244.6 189 65.1
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 2.3e-62 242.7 189 63.5
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 2.3e-62 242.7 189 63.0
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 8.8e-62 240.7 189 63.5
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.7e-60 236.5 189 63.5
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.2e-60 236.1 190 60.0
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.8e-60 235.7 189 63.0
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 3.7e-60 235.3 186 63.4
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 8.2e-60 234.2 180 63.9
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 8.2e-60 234.2 189 63.0
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.1e-59 233.8 189 62.4
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 6.9e-59 231.1 190 62.1
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 6.9e-59 231.1 189 58.7
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 9.1e-59 230.7 189 61.4
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.5e-58 229.9 189 59.3
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 1.5e-58 229.9 190 63.2
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 1.5e-58 229.9 188 60.6
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.5e-58 229.9 190 63.2
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 2.0e-58 229.6 190 62.6
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.0e-58 229.6 189 60.8
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 2.6e-58 229.2 190 62.1
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 2.6e-58 229.2 195 60.0
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 3.4e-58 228.8 190 60.0
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 5.9e-58 228.0 189 58.7
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 5.9e-58 228.0 191 60.7
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 7.7e-58 227.6 192 58.9
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.0e-57 227.3 190 62.1
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.3e-57 226.9 189 60.8
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 1.3e-57 226.9 195 58.5
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 2.2e-57 226.1 191 60.7
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 3.8e-57 225.3 191 59.7
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.8e-57 225.3 193 60.6
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 5.0e-57 224.9 190 57.9
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 5.0e-57 224.9 189 59.3
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 5.0e-57 224.9 190 60.0
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 6.5e-57 224.6 191 58.6
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 8.5e-57 224.2 196 59.2
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 1.9e-56 223.0 186 60.8
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 1.9e-56 223.0 195 57.4
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.9e-56 223.0 190 57.4
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 1.9e-56 223.0 188 61.2
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 4.2e-56 221.9 195 56.4
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 1.6e-55 219.9 190 56.3
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.1e-55 219.5 190 58.9
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.1e-55 219.5 190 58.9
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 2.7e-55 219.2 190 55.8
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 2.7e-55 219.2 190 55.8
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 2.7e-55 219.2 190 60.0
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 3.6e-55 218.8 188 62.8
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.6e-55 218.8 189 58.2
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 6.1e-55 218.0 190 55.8
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 6.1e-55 218.0 190 55.8
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 7.9e-55 217.6 190 56.8
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.0e-54 217.2 190 55.3
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 2.3e-54 216.1 189 59.8
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 2.3e-54 216.1 190 55.3
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 3.9e-54 215.3 190 55.3
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 3.9e-54 215.3 192 58.3
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 5.1e-54 214.9 223 52.5
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 5.1e-54 214.9 251 49.0
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 6.7e-54 214.5 191 57.6
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 2.0e-53 213.0 182 59.3
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 2.0e-53 213.0 190 56.3
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 3.3e-53 212.2 190 54.2
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.7e-52 209.9 190 53.2
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 1.7e-52 209.9 183 55.7
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 1.7e-52 209.9 158 65.8
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 3.7e-52 208.8 200 56.0
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.7e-52 208.8 179 58.7
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 6.3e-52 208.0 188 56.4
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 6.3e-52 208.0 188 56.4
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 8.2e-52 207.6 143 68.5
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 8.2e-52 207.6 188 56.9
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.1e-51 207.2 196 53.6
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.8e-51 206.5 180 57.2
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.8e-51 206.5 188 55.9
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 3.5e-50 202.2 191 53.9
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 4.5e-50 201.8 190 54.2
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.3e-49 200.3 174 54.0
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 2.9e-49 199.1 140 64.3
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 8.5e-49 197.6 158 62.0
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 2.5e-48 196.1 200 53.0
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 4.2e-48 195.3 140 67.1
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.7e-47 192.6 140 67.1
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 8.0e-47 191.0 160 60.0
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.1e-43 180.6 147 55.8
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 3.5e-42 175.6 157 54.1
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 2.2e-41 172.9 191 52.9
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 5.0e-41 171.8 189 50.8
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 1.6e-39 166.8 157 51.0
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 3.0e-38 162.5 131 57.3
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 5.0e-33 145.2 190 46.8
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 1.8e-30 136.7 190 43.7
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 8.3e-28 127.9 86 70.9
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 7.0e-27 124.8 191 40.8
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 1.7e-25 120.2 182 40.1
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.3e-25 119.8 97 63.9
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 2.5e-24 116.3 89 64.0
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.3e-22 109.8 118 49.2
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 2.6e-21 106.3 120 44.2
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 4.9e-20 102.1 175 35.4
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.7e-18 96.3 83 59.0
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 1.0e-17 94.4 94 48.9
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 8.6e-17 91.3 67 68.7
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.3e-14 83.2 75 58.7
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 1.2e-13 80.9 138 34.1
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 1.5e-13 80.5 131 33.6
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.1e-11 74.3 95 35.8
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 9.5e-08 61.2 32 93.8
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 1.2e-07 60.8 48 66.7
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 3.6e-07 59.3 101 40.6
vmacro22116 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.4e-06 57.4 39 59.0


User provided reference genes

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