Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 3.1e-122 441.8 226 100.0
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 6.2e-70 268.1 203 69.5
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 2.1e-62 243.0 189 70.9
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 6.2e-62 241.5 210 63.3
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 3.1e-61 239.2 196 65.3
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 9.0e-61 237.7 187 66.8
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 1.5e-60 236.9 211 60.2
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 1.7e-59 233.4 213 60.6
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.9e-58 229.9 211 60.7
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 2.5e-58 229.6 207 59.9
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 4.2e-58 228.8 187 65.2
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.2e-57 227.3 212 59.0
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 2.1e-57 226.5 184 65.2
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 6.0e-57 224.9 181 65.2
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 6.0e-57 224.9 208 60.6
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.0e-56 224.2 183 63.4
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 3.0e-56 222.6 183 65.0
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 5.1e-56 221.9 195 60.5
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 6.7e-56 221.5 189 64.0
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 8.7e-56 221.1 170 68.2
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 1.1e-55 220.7 182 62.6
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 1.5e-55 220.3 185 65.9
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 1.9e-55 219.9 208 59.1
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 1.3e-54 217.2 166 69.9
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 2.1e-54 216.5 181 63.0
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 3.7e-54 215.7 209 56.9
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 4.8e-54 215.3 194 61.3
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 4.8e-54 215.3 178 63.5
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 6.3e-54 214.9 186 63.4
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 8.2e-54 214.5 189 63.5
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 1.1e-53 214.2 194 60.8
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 1.1e-53 214.2 185 60.5
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.8e-53 213.4 163 67.5
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 2.4e-53 213.0 167 69.5
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 2.4e-53 213.0 171 65.5
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 2.4e-53 213.0 170 67.6
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 4.1e-53 212.2 194 60.8
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 4.1e-53 212.2 184 63.6
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.2e-52 210.7 207 55.6
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.2e-52 210.7 186 62.4
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 1.2e-52 210.7 167 65.9
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 2.0e-52 209.9 185 61.6
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 2.6e-52 209.5 166 67.5
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 7.6e-52 208.0 207 56.0
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 1.3e-51 207.2 207 55.6
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 1.3e-51 207.2 167 64.7
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 1.3e-51 207.2 168 67.3
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 2.2e-51 206.5 201 56.2
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 2.2e-51 206.5 166 63.9
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 3.8e-51 205.7 184 62.0
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 3.8e-51 205.7 203 56.7
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 3.8e-51 205.7 167 63.5
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.1e-50 204.1 170 65.9
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 1.4e-50 203.8 204 52.9
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 5.5e-50 201.8 174 66.1
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 7.2e-50 201.4 187 60.4
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 7.2e-50 201.4 175 62.3
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 9.3e-50 201.1 196 55.1
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 1.2e-49 200.7 187 59.4
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 1.2e-49 200.7 214 54.7
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 1.6e-49 200.3 194 59.8
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 1.6e-49 200.3 171 64.3
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 2.1e-49 199.9 196 54.6
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 2.1e-49 199.9 193 59.1
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 2.1e-49 199.9 190 58.4
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.1e-49 199.9 190 58.4
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 3.5e-49 199.1 165 64.2
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.6e-49 198.7 207 55.6
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 1.3e-48 197.2 179 60.9
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 1.3e-48 197.2 194 56.7
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 1.8e-48 196.8 193 58.5
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 2.3e-48 196.4 132 72.7
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 2.3e-48 196.4 151 67.5
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 3.0e-48 196.1 151 66.9
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 3.9e-48 195.7 190 56.3
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 5.1e-48 195.3 191 58.1
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 6.7e-48 194.9 144 68.8
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 1.1e-47 194.1 131 74.0
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 1.5e-47 193.7 180 57.2
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 1.5e-47 193.7 174 63.2
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 2.5e-47 193.0 206 54.9
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 3.3e-47 192.6 157 65.0
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 3.3e-47 192.6 132 72.0
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 4.3e-47 192.2 167 61.7
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 4.3e-47 192.2 130 75.4
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 5.7e-47 191.8 160 63.1
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 9.7e-47 191.0 132 71.2
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 9.7e-47 191.0 176 59.1
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 2.8e-46 189.5 150 64.7
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 1.1e-45 187.6 184 58.2
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 3.1e-45 186.0 132 69.7
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 1.2e-44 184.1 132 68.9
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.2e-44 184.1 148 65.5
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 2.6e-44 183.0 189 54.5
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 4.5e-44 182.2 132 68.2
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 6.5e-43 178.3 128 71.9
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 1.9e-42 176.8 203 52.7
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 7.9e-41 171.4 188 53.2
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.0e-40 171.0 122 68.0
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.9e-34 150.2 117 67.5
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 5.5e-34 148.7 101 70.3
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 3.6e-33 146.0 162 48.1
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 3.9e-32 142.5 127 56.7
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 2.8e-30 136.3 134 52.2
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 1.0e-27 127.9 132 48.5
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 1.6e-25 120.6 129 52.7
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 7.7e-20 101.7 116 50.9
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 5.0e-19 99.0 71 64.8
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 1.5e-15 87.4 93 50.5
MCO04G154 Micromonas commoda HOM05D007072 ORTHO05D008841 9.8e-07 58.2 161 28.0
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 4.9e-06 55.8 101 30.7
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 8.3e-06 55.1 122 30.3
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 8.3e-06 55.1 101 28.7


User provided reference genes

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