Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 2.0e-112 409.1 199 100.0
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 7.1e-78 294.3 190 73.7
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 6.1e-69 264.6 179 70.4
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 1.6e-53 213.4 175 56.0
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 3.6e-53 212.2 178 57.9
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 1.4e-52 210.3 175 56.0
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 1.4e-52 210.3 176 58.0
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 9.7e-51 204.1 182 53.8
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 9.7e-51 204.1 183 55.2
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.3e-50 203.8 181 55.2
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 2.8e-50 202.6 175 57.1
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 6.3e-50 201.4 180 55.0
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 6.3e-50 201.4 179 55.9
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 8.2e-50 201.1 176 55.7
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 1.4e-49 200.3 171 58.5
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 1.4e-49 200.3 169 56.8
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 2.4e-49 199.5 182 52.7
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 3.1e-49 199.1 172 55.2
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 4.1e-49 198.7 178 51.7
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 7.0e-49 198.0 171 57.3
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 7.0e-49 198.0 178 52.8
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 7.0e-49 198.0 171 57.3
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 9.1e-49 197.6 186 53.8
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 9.1e-49 197.6 171 55.0
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 9.1e-49 197.6 171 56.7
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 2.0e-48 196.4 183 55.2
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 2.0e-48 196.4 171 56.7
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 4.5e-48 195.3 185 52.4
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 5.9e-48 194.9 180 56.7
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 1.3e-47 193.7 181 53.0
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 1.3e-47 193.7 181 53.0
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 1.7e-47 193.4 186 51.1
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 1.7e-47 193.4 171 55.0
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 1.7e-47 193.4 174 54.0
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 5.0e-47 191.8 183 51.4
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 8.5e-47 191.0 183 53.0
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 2.5e-46 189.5 183 54.6
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 7.2e-46 188.0 171 53.2
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 9.4e-46 187.6 178 51.1
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 9.4e-46 187.6 187 52.4
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 1.6e-45 186.8 171 54.4
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 8.0e-45 184.5 183 53.0
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 2.3e-44 183.0 171 53.2
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 2.3e-44 183.0 171 53.2
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 2.3e-44 183.0 219 45.7
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 5.2e-44 181.8 168 51.8
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 8.8e-44 181.0 204 48.0
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 8.8e-44 181.0 172 53.5
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 1.5e-43 180.3 172 49.4
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 3.3e-43 179.1 177 52.0
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 9.7e-43 177.6 175 52.0
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 2.8e-42 176.0 166 55.4
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 2.8e-42 176.0 178 51.7
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 4.8e-42 175.3 169 52.1
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 4.8e-42 175.3 203 47.3
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 9.1e-41 171.0 177 48.6
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 3.5e-40 169.1 177 49.7
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 7.7e-40 167.9 186 48.4
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 1.3e-39 167.2 169 50.9
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 1.3e-39 167.2 173 49.7
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 5.0e-39 165.2 185 44.9
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 8.5e-39 164.5 189 48.7
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 8.5e-39 164.5 189 48.7
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 1.5e-38 163.7 181 47.5
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 1.5e-38 163.7 188 45.7
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 1.9e-38 163.3 176 50.6
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 2.5e-38 162.9 187 44.9
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 3.2e-38 162.5 169 52.7
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 4.2e-38 162.2 188 45.2
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 4.2e-38 162.2 167 53.9
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 5.5e-38 161.8 176 50.0
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 9.4e-38 161.0 186 46.8
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 1.2e-37 160.6 184 48.4
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 1.2e-37 160.6 184 48.4
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 2.7e-37 159.5 177 48.6
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 3.6e-37 159.1 180 46.7
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 6.1e-37 158.3 195 45.1
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 1.0e-36 157.5 191 45.0
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 1.4e-36 157.1 175 50.9
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.4e-36 157.1 168 48.8
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 2.3e-36 156.4 169 47.3
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 1.2e-35 154.1 166 51.8
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 1.2e-35 154.1 147 53.7
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 1.5e-35 153.7 166 45.2
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 2.6e-35 152.9 182 45.1
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 3.4e-35 152.5 173 48.6
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 3.4e-35 152.5 116 62.1
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 2.2e-34 149.8 171 48.5
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 1.2e-32 144.1 111 61.3
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.7e-31 140.2 168 45.8
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 5.0e-31 138.7 178 42.7
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 6.5e-31 138.3 127 52.0
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 1.9e-30 136.7 85 70.6
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 1.8e-28 130.2 158 44.9
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 1.2e-27 127.5 164 42.1
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 1.7e-26 123.6 171 42.1
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 3.7e-26 122.5 150 44.0
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 3.7e-26 122.5 166 38.6
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 4.9e-26 122.1 181 39.8
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 6.3e-26 121.7 82 65.9
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 4.1e-25 119.0 131 48.9
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 9.2e-25 117.9 183 39.9
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 1.6e-24 117.1 186 38.2
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 2.0e-24 116.7 217 33.6
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 7.8e-24 114.8 96 55.2
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 1.0e-23 114.4 96 55.2
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 5.0e-23 112.1 202 37.6
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 5.0e-23 112.1 202 37.6
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 1.9e-22 110.2 80 65.0
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 1.2e-21 107.5 155 41.3
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 6.1e-21 105.1 95 47.4
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 6.1e-21 105.1 177 37.3
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 1.3e-18 97.4 157 34.4
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 1.1e-17 94.4 74 55.4
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.1e-14 84.3 89 50.6
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 3.6e-13 79.3 70 51.4
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 1.4e-12 77.4 84 52.4
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 3.4e-11 72.8 99 34.3
Zm00001eb345970 Zea mays HOM05D001617 ORTHO05D008611 1.2e-08 64.3 97 37.1
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 3.3e-06 56.2 146 30.1


User provided reference genes

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