Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0061001 Helianthus annuus HOM05D006588 ORTHO05D008272 2.1e-91 339.0 162 100.0
Lsat_1_v5_gn_7_39041 Lactuca sativa HOM05D006588 ORTHO05D008272 3.3e-41 172.2 148 61.5
HanXRQChr03g0060991 Helianthus annuus HOM05D006588 ORTHO05D008272 2.2e-40 169.5 141 62.4
HanXRQChr05g0142321 Helianthus annuus HOM05D006588 ORTHO05D008272 4.1e-39 165.2 148 62.2
HanXRQChr03g0060681 Helianthus annuus HOM05D006588 ORTHO05D008272 6.9e-39 164.5 150 62.0
ECA240G3150 Erigeron canadensis HOM05D006588 ORTHO05D008272 3.4e-38 162.2 148 57.4
HanXRQChr09g0238251 Helianthus annuus HOM05D006588 ORTHO05D008272 1.7e-37 159.8 150 56.0
HanXRQChr03g0060651 Helianthus annuus HOM05D006588 ORTHO05D008272 2.1e-35 152.9 147 59.9
HanXRQChr03g0060671 Helianthus annuus HOM05D006588 ORTHO05D008272 2.1e-35 152.9 147 59.9
HanXRQChr03g0060961 Helianthus annuus HOM05D006588 ORTHO05D008272 2.7e-35 152.5 141 61.0
HanXRQChr03g0061101 Helianthus annuus HOM05D006588 ORTHO05D008272 1.8e-34 149.8 148 56.8
HanXRQChr03g0060631 Helianthus annuus HOM05D006588 ORTHO05D008272 1.1e-31 140.6 151 57.0
Lsat_1_v5_gn_7_38780 Lactuca sativa HOM05D006588 ORTHO05D008272 9.1e-31 137.5 146 51.4
Lsat_1_v5_gn_7_38281 Lactuca sativa HOM05D006588 ORTHO05D008272 6.5e-29 131.3 148 52.0
Lsat_1_v5_gn_7_38040 Lactuca sativa HOM05D006588 ORTHO05D008272 1.9e-28 129.8 134 50.7
Lsat_1_v5_gn_7_37981 Lactuca sativa HOM05D006588 ORTHO05D008272 1.2e-27 127.1 143 49.0
Lsat_1_v5_gn_7_38001 Lactuca sativa HOM05D006588 ORTHO05D008272 1.2e-27 127.1 143 49.0
Lsat_1_v5_gn_7_38020 Lactuca sativa HOM05D006588 ORTHO05D008272 1.6e-27 126.7 134 50.0
Lj4C316T0 Lonicera japonica HOM05D006588 ORTHO05D008272 1.6e-27 126.7 154 48.1
Dinv36733 Davidia involucrata HOM05D006588 ORTHO05D008272 3.0e-26 122.5 148 45.9
MSTRG.10583 Avicennia marina HOM05D006588 ORTHO05D008272 6.7e-26 121.3 115 50.4
CSS0027625 Camellia sinensis var. sinensis HOM05D006588 ORTHO05D008272 2.6e-25 119.4 148 45.9
Rhsim05G0031800 Rhododendron simsii HOM05D006588 ORTHO05D008272 7.5e-25 117.9 160 44.4
vmacro10821 Vaccinium macrocarpon HOM05D006588 ORTHO05D008272 9.7e-25 117.5 143 44.8
QL02p063459 Quercus lobata HOM05D006588 ORTHO05D008272 1.3e-24 117.1 148 45.3
Gohir.A06G070700 Gossypium hirsutum HOM05D006588 ORTHO05D008272 2.2e-24 116.3 133 46.6
Gohir.D06G069300 Gossypium hirsutum HOM05D006588 ORTHO05D008272 2.2e-24 116.3 133 46.6
Gorai.010G080900 Gossypium raimondii HOM05D006588 ORTHO05D008272 2.2e-24 116.3 133 46.6
Hma1.2p1_1074F.1_g254320 Hydrangea macrophylla HOM05D006588 ORTHO05D008272 2.8e-24 115.9 115 51.3
CiPaw.03G219600 Carya illinoinensis HOM05D006588 ORTHO05D008272 3.7e-24 115.5 148 43.9
Atru.chr7.1520 Acer truncatum HOM05D006588 ORTHO05D008272 1.4e-23 113.6 157 41.4
Migut.K00574 Erythranthe guttata HOM05D006588 ORTHO05D008272 2.4e-23 112.8 133 45.1
HanXRQChr03g0060621 Helianthus annuus HOM05D006588 ORTHO05D008272 4.1e-23 112.1 97 60.8
CANSAT56G2228 Cannabis sativa HOM05D006588 ORTHO05D008272 5.3e-23 111.7 122 48.4
CANSAT56G3648 Cannabis sativa HOM05D006588 ORTHO05D008272 5.3e-23 111.7 122 48.4
MBI04_g06220_MAGBIO Magnolia biondii HOM05D006588 ORTHO05D008272 5.3e-23 111.7 111 52.3
Oeu018228.1 Olea europaea HOM05D006588 ORTHO05D008272 7.0e-23 111.3 133 44.4
Thecc.09G094100 Theobroma cacao HOM05D006588 ORTHO05D008272 1.2e-22 110.5 160 43.1
Cfa003132 Carpinus fangiana HOM05D006588 ORTHO05D008272 1.6e-22 110.2 131 46.6
CANSAT56G0790 Cannabis sativa HOM05D006588 ORTHO05D008272 2.0e-22 109.8 122 47.5
Cc06_g10980 Coffea canephora HOM05D006588 ORTHO05D008272 4.5e-22 108.6 146 41.8
Haze_25873 Corylus avellana HOM05D006588 ORTHO05D008272 4.5e-22 108.6 131 46.6
Manes.03G030400 Manihot esculenta HOM05D006588 ORTHO05D008272 1.3e-21 107.1 115 48.7
Ciclev10008264m.g Citrus clementina HOM05D006588 ORTHO05D008272 2.9e-21 105.9 152 43.4
TWI34G1517 Tripterygium wilfordii HOM05D006588 ORTHO05D008272 5.0e-21 105.1 133 43.6
Rhsim05G0031600 Rhododendron simsii HOM05D006588 ORTHO05D008272 8.5e-21 104.4 146 43.8
Duzib150G1363 Durio zibethinus HOM05D006588 ORTHO05D008272 1.5e-20 103.6 159 41.5
TAR636G2459 Trochodendron aralioides HOM05D006588 ORTHO05D008272 1.9e-20 103.2 124 45.2
Nn6g35407 Nelumbo nucifera HOM05D006588 ORTHO05D008272 5.5e-20 101.7 148 39.9
Sc15g0003870 Simmondsia chinensis HOM05D006588 ORTHO05D008272 9.4e-20 100.9 115 45.2
SalBow1G2363 Salvia bowleyana HOM05D006588 ORTHO05D008272 1.2e-19 100.5 115 43.5
SalBow1G2795 Salvia bowleyana HOM05D006588 ORTHO05D008272 1.2e-19 100.5 115 43.5
ATR0789G046 Amborella trichopoda HOM05D006588 ORTHO05D008272 1.6e-19 100.1 147 40.8
CDE06G2665 Ceratophyllum demersum HOM05D006588 ORTHO05D008272 2.1e-19 99.8 149 40.9
TPR.G25442 Trifolium pratense HOM05D006588 ORTHO05D008272 2.1e-19 99.8 115 47.0
Medtr8g101930 Medicago truncatula HOM05D006588 ORTHO05D008272 4.7e-19 98.6 115 46.1
Os01g0193500 Oryza sativa ssp. japonica HOM05D006588 ORTHO05D008272 4.7e-19 98.6 121 45.5
Aa31LG2G21010 Aethionema arabicum HOM05D006588 ORTHO05D008272 8.0e-19 97.8 115 46.1
Eucgr.C00929 Eucalyptus grandis HOM05D006588 ORTHO05D008272 1.0e-18 97.4 115 45.2
ClCG11G012860 Citrullus lanatus HOM05D006588 ORTHO05D008272 1.4e-18 97.1 114 45.6
unitig_699.g19309 Utricularia gibba HOM05D006588 ORTHO05D008272 1.8e-18 96.7 131 42.0
CANSAT56G3251 Cannabis sativa HOM05D006588 ORTHO05D008272 3.0e-18 95.9 143 41.3
CARHR237240 Cardamine hirsuta HOM05D006588 ORTHO05D008272 4.0e-18 95.5 121 42.1
Lalb_Chr09g0331761 Lupinus albus HOM05D006588 ORTHO05D008272 4.0e-18 95.5 115 45.2
Psat7g018800 Pisum sativum HOM05D006588 ORTHO05D008272 5.2e-18 95.1 115 45.2
THA.LOC104814599 Tarenaya hassleriana HOM05D006588 ORTHO05D008272 6.8e-18 94.7 115 42.6
MELO3C011777.2 Cucumis melo HOM05D006588 ORTHO05D008272 8.8e-18 94.4 114 46.5
CsaV3_5G029260 Cucumis sativus L. HOM05D006588 ORTHO05D008272 8.8e-18 94.4 114 46.5
Glyma.08G030700 Glycine max HOM05D006588 ORTHO05D008272 8.8e-18 94.4 115 46.1
Sp7g27300 Schrenkiella parvula HOM05D006588 ORTHO05D008272 8.8e-18 94.4 115 43.5
Zm00001eb121140 Zea mays HOM05D006588 ORTHO05D008272 8.8e-18 94.4 148 43.2
Sed0004057 Sechium edule HOM05D006588 ORTHO05D008272 1.2e-17 94.0 114 45.6
SGA_v2.0_scaffold28G11949 Striga asiatica HOM05D006588 ORTHO05D008272 1.2e-17 94.0 146 38.4
A01p08610 Brassica napus HOM05D006588 ORTHO05D008272 2.0e-17 93.2 115 43.5
BraA01t00812Z Brassica rapa HOM05D006588 ORTHO05D008272 2.0e-17 93.2 115 43.5
Lj4g0006334 Lotus japonicus HOM05D006588 ORTHO05D008272 2.6e-17 92.8 146 39.0
SEGI_25649 Sequoiadendron giganteum HOM05D006588 ORTHO05D008272 2.6e-17 92.8 115 43.5
HPP92_003983 Vanilla planifolia HOM05D006588 ORTHO05D008272 2.6e-17 92.8 116 42.2
Carub.0007s1112 Capsella rubella HOM05D006588 ORTHO05D008272 4.4e-17 92.0 114 41.2
AT4G29420 Arabidopsis thaliana HOM05D006588 ORTHO05D008272 5.7e-17 91.7 115 43.5
Thhalv10025196m.g Eutrema salsugineum HOM05D006588 ORTHO05D008272 5.7e-17 91.7 115 43.5
AL7G22970 Arabidopsis lyrata HOM05D006588 ORTHO05D008272 7.5e-17 91.3 124 40.3
Eucgr.L03123 Eucalyptus grandis HOM05D006588 ORTHO05D008272 1.7e-16 90.1 115 41.7
VMungo0251G0425 Vigna mungo HOM05D006588 ORTHO05D008272 2.2e-16 89.7 115 43.5
Phvul.002G305400 Phaseolus vulgaris HOM05D006588 ORTHO05D008272 3.7e-16 89.0 115 44.3
C01p10080 Brassica napus HOM05D006588 ORTHO05D008272 6.3e-16 88.2 115 40.9
BolC1t00966H Brassica oleracea HOM05D006588 ORTHO05D008272 6.3e-16 88.2 115 40.9
Ca_17389_v3 Cicer arietinum L. HOM05D006588 ORTHO05D008272 1.1e-15 87.4 106 45.3
BcaC09g51727 Brassica carinata HOM05D006588 ORTHO05D008272 1.6e-14 83.6 116 40.5
Lsat_1_v5_gn_7_38181 Lactuca sativa HOM05D006588 ORTHO05D008272 1.1e-12 77.4 144 38.2
Nn7g36587 Nelumbo nucifera HOM05D006588 ORTHO05D008272 4.2e-12 75.5 70 48.6
Rhsim05G0031700 Rhododendron simsii HOM05D006588 ORTHO05D008272 2.6e-09 66.2 68 44.1


User provided reference genes

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