Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 1.4e-88 329.7 177 100.0
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 1.4e-88 329.7 177 100.0
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 1.4e-88 329.7 177 100.0
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 1.4e-88 329.7 177 100.0
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 1.4e-88 329.7 177 100.0
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 1.4e-88 329.7 177 100.0
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 1.4e-88 329.7 177 100.0
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 2.1e-81 305.8 177 91.5
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 4.4e-79 298.1 177 89.3
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 4.4e-79 298.1 177 89.3
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 4.4e-79 298.1 177 89.3
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.3e-78 296.6 177 89.3
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 2.8e-78 295.4 177 87.6
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 4.9e-78 294.7 177 89.3
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 4.9e-78 294.7 177 89.3
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 4.9e-78 294.7 177 88.7
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 8.3e-78 293.9 177 88.7
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.1e-77 293.5 177 88.1
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 1.4e-77 293.1 177 87.0
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 2.4e-77 292.4 162 96.9
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 4.1e-77 291.6 177 88.1
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 1.6e-76 289.7 177 87.6
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 1.6e-76 289.7 177 87.6
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 1.6e-76 289.7 177 87.6
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 1.6e-76 289.7 177 87.0
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 1.6e-76 289.7 177 87.0
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 2.9e-75 285.4 177 85.3
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 8.6e-75 283.9 177 85.9
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 7.3e-74 280.8 177 84.2
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 7.3e-74 280.8 177 84.7
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 83.6
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 1.6e-73 279.6 176 83.5
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 3.6e-73 278.5 177 83.1
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 4.7e-73 278.1 177 82.5
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 6.1e-73 277.7 176 83.0
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 1.0e-72 276.9 177 83.6
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 1.0e-72 276.9 177 83.1
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 6.8e-72 274.2 177 81.9
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 2.6e-71 272.3 177 83.6
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 2.9e-70 268.9 177 83.6
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 3.2e-69 265.4 177 79.7
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 4.6e-68 261.5 176 80.1
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 7.8e-68 260.8 153 88.2
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 4.3e-66 255.0 153 86.3
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 5.6e-66 254.6 177 78.5
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.9e-62 242.3 152 83.6
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 8.1e-57 224.2 136 85.3
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 1.1e-53 213.8 141 80.9
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 7.1e-53 211.1 160 74.4
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 2.5e-50 202.6 135 79.3
HanXRQChr00c0336g0573671 Helianthus annuus HOM05D007371 ORTHO05D009319 5.2e-48 194.9 99 100.0
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 4.9e-46 188.3 124 81.5
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 4.6e-44 181.8 118 79.7
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 2.3e-43 179.5 117 76.1
Nn031s41614 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.6e-41 173.3 99 85.9
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 1.1e-40 170.6 108 83.3
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 1.1e-40 170.6 153 70.6
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-40 168.7 107 83.2
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-40 168.7 107 83.2
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-40 168.7 107 83.2
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-40 168.7 107 83.2
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 4.0e-40 168.7 119 78.2
Thecc.08G131100 Theobroma cacao HOM05D007371 ORTHO05D009319 4.0e-40 168.7 99 84.8
BolSC35t60705H Brassica oleracea HOM05D007371 ORTHO05D009319 2.2e-38 162.9 99 80.8
Gohir.A03G146201 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.9e-37 159.8 170 55.3
HanXRQChr05g0152451 Helianthus annuus HOM05D007371 ORTHO05D009319 6.0e-36 154.8 74 100.0
HanXRQChr08g0211951 Helianthus annuus HOM05D007371 ORTHO05D009319 6.0e-36 154.8 74 100.0
BraSC25t45911Z Brassica rapa HOM05D007371 ORTHO05D009319 7.9e-36 154.5 93 80.6
Gorai.013G109900 Gossypium raimondii HOM05D007371 ORTHO05D009319 3.9e-35 152.1 98 79.6
C09p40330 Brassica napus HOM05D007371 ORTHO05D009319 1.9e-34 149.8 100 78.0
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 2.5e-34 149.4 99 81.8
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 1.6e-33 146.7 128 62.5
Nitab4.5_0007979g0070 Nicotiana tabacum HOM05D007371 ORTHO05D009319 1.6e-33 146.7 178 57.3
Gorai.005G189900 Gossypium raimondii HOM05D007371 ORTHO05D009319 4.0e-32 142.1 94 73.4
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 1.2e-31 140.6 84 91.7
BraSC138t45534Z Brassica rapa HOM05D007371 ORTHO05D009319 2.6e-31 139.4 109 72.5
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 6.4e-30 134.8 75 100.0
Gohir.D02G169550 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.4e-29 132.9 96 68.8
Gohir.D07G194033 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.2e-28 130.6 76 86.8
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 2.1e-28 129.8 84 85.7
BraSC58t46462Z Brassica rapa HOM05D007371 ORTHO05D009319 1.9e-26 123.2 75 76.0
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 5.6e-26 121.7 90 78.9
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 1.3e-25 120.6 84 78.6
HanXRQChr02g0037971 Helianthus annuus HOM05D007371 ORTHO05D009319 3.7e-25 119.0 83 83.1
arahy.Tifrunner.gnm1.ann1.UDKX9E Arachis hypogaea HOM05D000890 ORTHO05D000697 6.2e-25 118.2 67 79.1
arahy.Tifrunner.gnm1.ann1.4VL02K Arachis hypogaea HOM05D001200 ORTHO05D009778 2.0e-23 113.2 74 79.7
arahy.Tifrunner.gnm1.ann1.9I8ZI2 Arachis hypogaea HOM05D001200 ORTHO05D009778 2.0e-23 113.2 74 79.7
arahy.Tifrunner.gnm1.ann1.V71EA1 Arachis hypogaea HOM05D001200 ORTHO05D009778 2.0e-23 113.2 74 79.7
RcHm_v2.0_Chr4g0438011 Rosa chinensis HOM05D007371 ORTHO05D009319 5.8e-23 111.7 60 93.3
SMO086G0016 Selaginella moellendorffii HOM05D007371 ORTHO05D009319 1.0e-22 110.9 176 45.5
HanXRQChr11g0323761 Helianthus annuus HOM05D007371 ORTHO05D009319 3.3e-18 95.9 81 75.3
Lalb_Chr09g0335451 Lupinus albus HOM05D007371 ORTHO05D009319 3.7e-17 92.4 65 78.5
Aa31LG5G21710 Aethionema arabicum HOM05D007371 ORTHO05D009319 8.2e-17 91.3 85 64.7
HanXRQChr02g0038001 Helianthus annuus HOM05D007371 ORTHO05D009319 1.8e-16 90.1 61 83.6
Lsat_1_v5_gn_6_54121 Lactuca sativa HOM05D007371 ORTHO05D009319 1.2e-15 87.4 48 97.9
Mapoly0048s0040 Marchantia polymorpha HOM05D007371 ORTHO05D009319 1.2e-15 87.4 99 46.5
BolC7t43856H Brassica oleracea HOM05D007371 ORTHO05D009319 2.0e-15 86.7 56 80.4
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 6.7e-11 71.6 45 77.8
Lalb_Chr11g0071331 Lupinus albus HOM05D007371 ORTHO05D009319 2.2e-09 66.6 70 54.3
Haze_02268 Corylus avellana HOM05D007371 ORTHO05D009319 6.9e-08 61.6 42 76.2
Hund24330 Selenicereus undatus HOM05D007371 ORTHO05D009319 4.5e-07 58.9 41 68.3


User provided reference genes

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