Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0058501 Helianthus annuus HOM05D011053 ORTHO05D010547 2.4e-270 934.9 465 100.0
HanXRQChr07g0197521 Helianthus annuus HOM05D011053 ORTHO05D010547 2.8e-77 293.5 411 39.9
HanXRQChr08g0225061 Helianthus annuus HOM05D011053 ORTHO05D010547 8.6e-74 282.0 403 39.2
HanXRQChr04g0126351 Helianthus annuus HOM05D011053 ORTHO05D010547 8.0e-64 248.8 387 38.2
ECA238G0409 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-57 228.0 375 35.2
ECA240G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-57 228.0 378 35.7
HanXRQChr11g0327291 Helianthus annuus HOM05D011053 ORTHO05D010547 2.7e-51 207.2 342 32.2
HanXRQChr05g0159821 Helianthus annuus HOM05D011053 ORTHO05D010547 5.6e-49 199.5 383 32.4
HanXRQChr04g0115711 Helianthus annuus HOM05D011053 ORTHO05D010547 7.6e-46 189.1 319 34.2
HanXRQChr10g0285501 Helianthus annuus HOM05D011053 ORTHO05D010547 2.3e-42 177.6 235 42.6
HanXRQChr02g0048691 Helianthus annuus HOM05D011053 ORTHO05D010547 8.6e-42 175.6 411 29.2
HanXRQChr09g0251611 Helianthus annuus HOM05D011053 ORTHO05D010547 1.7e-34 151.4 143 53.8
HanXRQChr06g0172761 Helianthus annuus HOM05D011053 ORTHO05D010547 2.3e-34 151.0 169 46.2
HanXRQChr08g0233401 Helianthus annuus HOM05D008839 ORTHO05D010547 6.2e-32 142.9 376 27.9
Lsat_1_v5_gn_9_116400 Lactuca sativa HOM05D011053 ORTHO05D010547 3.4e-30 137.1 302 30.1
HanXRQChr12g0354851 Helianthus annuus HOM05D011053 ORTHO05D010547 1.6e-27 128.3 128 46.9
ECA240G0326 Erigeron canadensis HOM05D008839 ORTHO05D010547 6.0e-27 126.3 302 28.5
ECA247G1268 Erigeron canadensis HOM05D000096 ORTHO05D002173 7.4e-25 119.4 254 29.9
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 1.8e-23 114.8 412 24.0
FvH4_6g08820 Fragaria vesca HOM05D007856 ORTHO05D003348 1.2e-22 112.1 407 25.6
FAN26G2587 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.4e-22 110.5 407 27.0
HanXRQChr11g0337461 Helianthus annuus HOM05D011053 ORTHO05D010547 1.2e-19 102.1 403 24.1
TWI39G0063 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.1e-19 101.3 408 24.5
ECA233G0787 Erigeron canadensis HOM05D000096 ORTHO05D000647 2.7e-19 100.9 97 48.5
ECA246G0696 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.9e-19 99.4 390 21.5
HanXRQChr16g0526441 Helianthus annuus HOM05D011053 ORTHO05D010547 1.3e-18 98.6 193 33.7
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 3.0e-18 97.4 371 23.5
Lsat_1_v5_gn_1_127421 Lactuca sativa HOM05D052696 ORTHO05D010547 5.1e-18 96.7 224 27.2
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 8.7e-18 95.9 370 24.6
TWI38G0982 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 8.7e-18 95.9 372 25.3
FvH4_1g07041 Fragaria vesca HOM05D007856 ORTHO05D003348 1.5e-17 95.1 408 23.8
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 1.5e-17 95.1 374 24.6
ECA238G2960 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.6e-17 93.2 335 23.3
Os07g0190600 Oryza sativa ssp. japonica HOM05D008312 ORTHO05D007430 5.6e-17 93.2 342 24.0
ECA234G4521 Erigeron canadensis HOM05D011053 ORTHO05D010547 7.4e-17 92.8 81 50.6
TWI31G0819 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 1.6e-16 91.7 446 22.0
TWI32G0194 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.8e-16 90.9 372 25.0
TWI56G0628 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 3.7e-16 90.5 372 23.4
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 6.2e-16 89.7 368 23.9
RcHm_v2.0_Chr2g0141711 Rosa chinensis HOM05D006849 ORTHO05D003348 6.2e-16 89.7 378 20.6
COL.COLO4_34001 Corchorus olitorius HOM05D007876 ORTHO05D007430 8.1e-16 89.4 331 24.2
ECA233G6247 Erigeron canadensis HOM05D000006 ORTHO05D001300 8.1e-16 89.4 240 28.8
TWI53G1742 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.4e-15 88.6 320 25.6
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 4.0e-15 87.0 74 52.7
FAN23G1437 Fragaria x ananassa HOM05D000005 ORTHO05D003348 5.3e-15 86.7 426 23.2
TWI53G0762 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 1.5e-14 85.1 358 22.9
Potri.019G061550 Populus trichocarpa HOM05D006849 ORTHO05D003348 3.4e-14 84.0 278 26.3
TWI63G1000 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 5.8e-14 83.2 359 23.4
COL.COLO4_37009 Corchorus olitorius HOM05D007876 ORTHO05D007430 7.6e-14 82.8 321 23.4
TWI63G1232 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.1e-12 79.0 374 23.0
FAN21G0042 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.4e-12 78.6 354 23.7
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 4.2e-12 77.0 305 25.2
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.2e-11 75.5 342 23.7
C08p05260 Brassica napus HOM05D000305 ORTHO05D000065 2.7e-11 74.3 381 20.7
DCAR_010742 Daucus carota HOM05D002907 ORTHO05D000065 3.5e-11 73.9 404 21.3
Lsat_1_v5_gn_9_118901 Lactuca sativa HOM05D008839 ORTHO05D010547 3.5e-11 73.9 404 21.0
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 4.6e-11 73.6 337 21.1
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 6.0e-11 73.2 378 24.1
FAN02G2385 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.0e-11 73.2 329 23.7
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.0e-11 73.2 369 21.4
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 7.9e-11 72.8 278 24.8
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 1.0e-10 72.4 370 20.8
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 1.0e-10 72.4 337 21.1
TWI36G0416 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 1.3e-10 72.0 269 23.8
Sp2g07180 Schrenkiella parvula HOM05D000305 ORTHO05D000065 3.0e-10 70.9 397 21.7
BcaC03g15089 Brassica carinata HOM05D000305 ORTHO05D000065 5.1e-10 70.1 333 20.7
QL07p006362 Quercus lobata HOM05D002907 ORTHO05D005554 5.1e-10 70.1 207 29.0
C06p25190 Brassica napus HOM05D000305 ORTHO05D000065 8.7e-10 69.3 276 21.7
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 8.7e-10 69.3 369 21.7
DCAR_007681 Daucus carota HOM05D002907 ORTHO05D000065 1.9e-09 68.2 391 21.7
Lsat_1_v5_gn_5_58000 Lactuca sativa HOM05D008839 ORTHO05D010547 2.5e-09 67.8 191 25.7
BraA06t24159Z Brassica rapa HOM05D000305 ORTHO05D000065 5.7e-09 66.6 338 18.9
HanXRQChr03g0065831 Helianthus annuus HOM05D011053 ORTHO05D010547 1.3e-08 65.5 74 43.2
Lsat_1_v5_gn_8_146240 Lactuca sativa HOM05D008839 ORTHO05D010547 1.3e-08 65.5 154 24.7
BolC2t08071H Brassica oleracea HOM05D000305 ORTHO05D000065 1.6e-08 65.1 275 21.8
A06p29380 Brassica napus HOM05D000305 ORTHO05D000065 2.8e-08 64.3 337 19.9
BcaB04g18848 Brassica carinata HOM05D000305 ORTHO05D000065 3.7e-08 63.9 391 20.5
C07p51960 Brassica napus HOM05D000305 ORTHO05D000065 3.7e-08 63.9 379 20.8
BcaC08g46433 Brassica carinata HOM05D000305 ORTHO05D000065 4.8e-08 63.5 339 19.5
C05p49880 Brassica napus HOM05D000305 ORTHO05D000065 6.3e-08 63.2 338 20.1
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 8.2e-08 62.8 356 20.2
BcaC07g41112 Brassica carinata HOM05D000305 ORTHO05D000065 8.2e-08 62.8 338 20.1
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-07 62.0 318 20.1
C02p29780 Brassica napus HOM05D000305 ORTHO05D000065 1.4e-07 62.0 328 19.2
C05p23730 Brassica napus HOM05D000305 ORTHO05D000065 1.4e-07 62.0 328 19.2
TPR.G15228 Trifolium pratense HOM05D000305 ORTHO05D000065 1.4e-07 62.0 165 26.1
BcaB02g07491 Brassica carinata HOM05D000305 ORTHO05D000065 1.8e-07 61.6 402 18.7
BcaB06g28441 Brassica carinata HOM05D000305 ORTHO05D000065 1.8e-07 61.6 431 20.6
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-07 61.2 367 20.4
BolC6t39439H Brassica oleracea HOM05D000305 ORTHO05D000065 2.4e-07 61.2 339 19.2
C01p38490 Brassica napus HOM05D000305 ORTHO05D000065 3.1e-07 60.8 277 22.0
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 4.1e-07 60.5 333 21.3
BraA05t23160Z Brassica rapa HOM05D000305 ORTHO05D000065 4.1e-07 60.5 335 20.0
A09p61930 Brassica napus HOM05D000305 ORTHO05D000065 5.3e-07 60.1 337 19.6
Lsat_1_v5_gn_9_31800 Lactuca sativa HOM05D008839 ORTHO05D010547 5.3e-07 60.1 82 29.3
Lj3g0013581 Lotus japonicus HOM05D007499 ORTHO05D000174 5.3e-07 60.1 396 21.0
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-07 59.7 374 18.7
BraA05t20149Z Brassica rapa HOM05D000305 ORTHO05D000065 6.9e-07 59.7 336 19.3
BraA07t28976Z Brassica rapa HOM05D000305 ORTHO05D000065 6.9e-07 59.7 338 19.8
BolC6t39090H Brassica oleracea HOM05D000305 ORTHO05D000065 9.0e-07 59.3 339 18.9
SpUn0384_0010 Schrenkiella parvula HOM05D000305 ORTHO05D000065 9.0e-07 59.3 194 26.3
A05p44990 Brassica napus HOM05D000305 ORTHO05D000065 1.5e-06 58.5 344 19.5
Aqoxy109s001 Aquilegia oxysepala HOM05D000494 ORTHO05D005554 2.6e-06 57.8 267 24.0
C07p30020 Brassica napus HOM05D000305 ORTHO05D000065 3.4e-06 57.4 400 20.8
BNapus_Darmor_BZH_scaffold_38p00180 Brassica napus HOM05D000305 ORTHO05D000065 4.5e-06 57.0 335 20.3
BcaC08g45892 Brassica carinata HOM05D000305 ORTHO05D000065 5.9e-06 56.6 274 21.2
BcaB08g35796 Brassica carinata HOM05D000305 ORTHO05D000065 7.6e-06 56.2 396 18.4
COL.COLO4_04226 Corchorus olitorius HOM05D007876 ORTHO05D007430 7.6e-06 56.2 340 20.9
A04p10250 Brassica napus HOM05D000305 ORTHO05D000065 1.0e-05 55.8 412 20.9
C09p34710 Brassica napus HOM05D000305 ORTHO05D000065 1.0e-05 55.8 420 20.2
BolC7t43542H Brassica oleracea HOM05D000305 ORTHO05D000065 1.0e-05 55.8 277 20.6
BolC8t51680H Brassica oleracea HOM05D000305 ORTHO05D000065 1.0e-05 55.8 360 19.4


User provided reference genes

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