Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0057221 Helianthus annuus HOM05D000092 ORTHO05D000042 7.5e-112 407.1 197 100.0
HanXRQChr02g0057141 Helianthus annuus HOM05D000092 ORTHO05D000042 5.2e-81 304.7 226 70.8
HanXRQChr02g0057251 Helianthus annuus HOM05D000092 ORTHO05D000042 6.6e-76 287.7 231 68.4
HanXRQChr02g0057451 Helianthus annuus HOM05D000092 ORTHO05D000042 5.4e-70 268.1 225 66.2
HanXRQChr00c0004g0571011 Helianthus annuus HOM05D000092 ORTHO05D000042 1.7e-63 246.5 218 64.7
HanXRQChr02g0057921 Helianthus annuus HOM05D000092 ORTHO05D000042 2.1e-61 239.6 229 62.0
HanXRQChr02g0057161 Helianthus annuus HOM05D000092 ORTHO05D000042 9.9e-56 220.7 203 62.1
HanXRQChr14g0427711 Helianthus annuus HOM05D000092 ORTHO05D000042 8.5e-31 137.9 182 50.0
HanXRQChr14g0457671 Helianthus annuus HOM05D000092 ORTHO05D000042 7.9e-29 131.3 184 46.7
HanXRQChr14g0427031 Helianthus annuus HOM05D000092 ORTHO05D000042 5.3e-25 118.6 182 43.4
Lsat_1_v5_gn_2_241 Lactuca sativa HOM05D000092 ORTHO05D000042 1.3e-23 114.0 190 41.6
Lsat_1_v5_gn_2_940 Lactuca sativa HOM05D000092 ORTHO05D000042 3.6e-21 105.9 188 39.9
Lsat_1_v5_gn_0_22900 Lactuca sativa HOM05D000092 ORTHO05D000042 4.7e-21 105.5 190 38.4
Lsat_1_v5_gn_2_11200 Lactuca sativa HOM05D000092 ORTHO05D000042 1.4e-20 104.0 185 37.8
Lsat_1_v5_gn_2_281 Lactuca sativa HOM05D000092 ORTHO05D000042 1.8e-20 103.6 189 37.6
Lsat_1_v5_gn_2_1701 Lactuca sativa HOM05D000092 ORTHO05D000042 3.0e-20 102.8 191 37.2
Lsat_1_v5_gn_2_1721 Lactuca sativa HOM05D000092 ORTHO05D000042 8.8e-20 101.3 191 38.2
Lsat_1_v5_gn_2_4720 Lactuca sativa HOM05D000092 ORTHO05D000042 8.8e-20 101.3 180 37.2
Lsat_1_v5_gn_3_97800 Lactuca sativa HOM05D000092 ORTHO05D000042 1.5e-19 100.5 192 38.5
Lsat_1_v5_gn_2_4600 Lactuca sativa HOM05D000092 ORTHO05D000042 2.0e-19 100.1 181 37.0
Lsat_1_v5_gn_2_4341 Lactuca sativa HOM05D000092 ORTHO05D000042 3.3e-19 99.4 184 38.6
Lsat_1_v5_gn_2_1100 Lactuca sativa HOM05D000092 ORTHO05D000042 4.4e-19 99.0 187 38.5
Lsat_1_v5_gn_2_4860 Lactuca sativa HOM05D000092 ORTHO05D000042 4.4e-19 99.0 183 37.7
Lsat_1_v5_gn_2_4301 Lactuca sativa HOM05D000092 ORTHO05D000042 5.7e-19 98.6 173 39.9
ECA238G2602 Erigeron canadensis HOM05D000092 ORTHO05D000042 7.4e-19 98.2 185 37.8
HanXRQChr15g0478881 Helianthus annuus HOM05D000092 ORTHO05D000042 9.7e-19 97.8 179 35.2
HanXRQChr14g0427791 Helianthus annuus HOM05D000092 ORTHO05D000042 2.2e-18 96.7 181 38.1
HanXRQChr15g0478711 Helianthus annuus HOM05D000092 ORTHO05D000042 2.2e-18 96.7 179 36.3
Lsat_1_v5_gn_2_23801 Lactuca sativa HOM05D000092 ORTHO05D000042 2.2e-18 96.7 189 36.0
Lsat_1_v5_gn_2_9780 Lactuca sativa HOM05D000092 ORTHO05D000042 2.2e-18 96.7 190 35.3
Lsat_1_v5_gn_2_261 Lactuca sativa HOM05D000092 ORTHO05D000042 6.3e-18 95.1 187 36.9
ECA238G0005 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.4e-17 94.0 181 37.6
ECA238G2350 Erigeron canadensis HOM05D000092 ORTHO05D000042 4.1e-17 92.4 142 41.5
HanXRQChr17g0546561 Helianthus annuus HOM05D000092 ORTHO05D000042 9.1e-17 91.3 154 38.3
Lsat_1_v5_gn_2_3981 Lactuca sativa HOM05D000092 ORTHO05D000042 9.1e-17 91.3 186 34.4
ECA238G3388 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.5e-16 90.5 192 34.4
Lsat_1_v5_gn_2_880 Lactuca sativa HOM05D000092 ORTHO05D000042 1.5e-16 90.5 121 45.5
Lsat_1_v5_gn_2_4161 Lactuca sativa HOM05D000092 ORTHO05D000042 2.0e-16 90.1 178 37.1
HanXRQChr15g0478971 Helianthus annuus HOM05D000092 ORTHO05D000042 2.6e-16 89.7 162 37.0
Lsat_1_v5_gn_2_1280 Lactuca sativa HOM05D000092 ORTHO05D000042 3.5e-16 89.4 183 35.5
ECA236G3286 Erigeron canadensis HOM05D000006 ORTHO05D000091 4.5e-16 89.0 120 40.0
Lsat_1_v5_gn_2_4900 Lactuca sativa HOM05D000092 ORTHO05D000042 4.5e-16 89.0 161 38.5
Lsat_1_v5_gn_2_340 Lactuca sativa HOM05D000092 ORTHO05D000042 5.9e-16 88.6 138 39.1
HanXRQChr04g0110631 Helianthus annuus HOM05D000092 ORTHO05D000042 1.0e-15 87.8 181 32.6
HanXRQChr15g0477941 Helianthus annuus HOM05D000092 ORTHO05D000042 1.0e-15 87.8 143 36.4
Lsat_1_v5_gn_0_37320 Lactuca sativa HOM05D000092 ORTHO05D000042 2.9e-15 86.3 160 35.0
ECA236G3011 Erigeron canadensis HOM05D000092 ORTHO05D000091 3.8e-15 85.9 155 35.5
HanXRQChr11g0339781 Helianthus annuus HOM05D000092 ORTHO05D000042 6.5e-15 85.1 183 31.1
Lsat_1_v5_gn_4_155261 Lactuca sativa HOM05D000092 ORTHO05D000042 6.5e-15 85.1 183 37.7
Lsat_1_v5_gn_2_5761 Lactuca sativa HOM05D000092 ORTHO05D000042 1.1e-14 84.3 151 37.7
Lsat_1_v5_gn_2_7461 Lactuca sativa HOM05D000092 ORTHO05D000042 1.1e-14 84.3 181 33.1
ECA238G4310 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.9e-14 83.6 116 41.4
HanXRQChr14g0428811 Helianthus annuus HOM05D000092 ORTHO05D000042 1.9e-14 83.6 109 49.5
Lsat_1_v5_gn_2_29860 Lactuca sativa HOM05D000092 ORTHO05D000042 5.5e-14 82.0 165 36.4
Lsat_1_v5_gn_0_22920 Lactuca sativa HOM05D000092 ORTHO05D000042 2.1e-13 80.1 157 34.4
Lsat_1_v5_gn_2_23360 Lactuca sativa HOM05D000092 ORTHO05D000042 2.1e-13 80.1 183 35.0
ECA246G0379 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.6e-13 79.3 76 46.1
HanXRQChr15g0477911 Helianthus annuus HOM05D000092 ORTHO05D000042 3.6e-13 79.3 163 31.3
Lsat_1_v5_gn_2_1220 Lactuca sativa HOM05D000092 ORTHO05D000042 8.0e-13 78.2 107 43.9
Lsat_1_v5_gn_2_1200 Lactuca sativa HOM05D000092 ORTHO05D000042 1.8e-12 77.0 151 37.1
ECA238G2734 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.9e-12 75.9 121 38.8
ECA238G3113 Erigeron canadensis HOM05D000092 ORTHO05D000042 9.7e-11 71.2 119 36.1
PGR031G0027 Punica granatum HOM05D000092 ORTHO05D000042 1.3e-10 70.9 146 34.9
COL.COLO4_20550 Corchorus olitorius HOM05D000092 ORTHO05D000042 1.7e-10 70.5 109 39.4
QL03p003203 Quercus lobata HOM05D000092 ORTHO05D000042 2.8e-10 69.7 145 31.0
QL03p002957 Quercus lobata HOM05D000092 ORTHO05D000042 1.1e-09 67.8 145 31.0
ECA238G3475 Erigeron canadensis HOM05D000092 ORTHO05D000042 2.4e-09 66.6 191 32.5
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.1e-09 66.2 190 32.6
ECA238G4804 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.1e-09 66.2 191 30.9
HanXRQChr02g0057201 Helianthus annuus HOM05D000092 ORTHO05D000042 4.1e-09 65.9 44 84.1
ECA238G1125 Erigeron canadensis HOM05D000092 ORTHO05D000042 7.0e-09 65.1 119 38.7
ClCG02G007590 Citrullus lanatus HOM05D000092 ORTHO05D000042 3.5e-08 62.8 119 33.6
COL.COLO4_32819 Corchorus olitorius HOM05D000092 ORTHO05D000042 7.7e-08 61.6 110 31.8
PGR035G0003 Punica granatum HOM05D000092 ORTHO05D000042 7.7e-08 61.6 140 34.3
ECA238G0851 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.0e-07 61.2 123 31.7
Rhsim04G0090000 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.0e-07 61.2 204 27.9
TPR.G1456 Trifolium pratense HOM05D000092 ORTHO05D000042 1.3e-07 60.8 93 32.3
Duzib177G0617 Durio zibethinus HOM05D000092 ORTHO05D000042 1.7e-07 60.5 82 41.5
Sabra13G0018200 Salix brachista HOM05D000092 ORTHO05D000042 2.2e-07 60.1 95 34.7
COL.COLO4_13577 Corchorus olitorius HOM05D000092 ORTHO05D000042 2.9e-07 59.7 120 28.3
GSVIVG01023551001 Vitis vinifera HOM05D000092 ORTHO05D000042 2.9e-07 59.7 123 29.3
ECA238G1743 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.8e-07 59.3 118 38.1
Sabra13G0018000 Salix brachista HOM05D000092 ORTHO05D000042 5.0e-07 58.9 66 40.9
Duzib177G0993 Durio zibethinus HOM05D000092 ORTHO05D000042 6.5e-07 58.5 148 30.4
ECA238G1348 Erigeron canadensis HOM05D000092 ORTHO05D000042 6.5e-07 58.5 118 37.3
HanXRQChr15g0479731 Helianthus annuus HOM05D000092 ORTHO05D000042 6.5e-07 58.5 163 28.2
QL03p002163 Quercus lobata HOM05D000092 ORTHO05D000042 6.5e-07 58.5 110 31.8
Dinv07584 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-06 57.8 100 33.0
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 1.1e-06 57.8 68 39.7
Potri.005G041101 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.5e-06 57.4 179 29.1
QL03p003333 Quercus lobata HOM05D000092 ORTHO05D000042 1.5e-06 57.4 147 29.3
Atru.chr2.1458 Acer truncatum HOM05D000092 ORTHO05D000042 1.9e-06 57.0 168 29.2
Duzib177G1011 Durio zibethinus HOM05D000092 ORTHO05D000042 1.9e-06 57.0 82 39.0
Sabra13G0014100 Salix brachista HOM05D000092 ORTHO05D000042 1.9e-06 57.0 87 34.5
Cfa006504 Carpinus fangiana HOM05D000092 ORTHO05D000042 2.5e-06 56.6 176 27.3
Ciclev10000221m.g Citrus clementina HOM05D000092 ORTHO05D000042 2.5e-06 56.6 137 30.7
Ciclev10003505m.g Citrus clementina HOM05D000092 ORTHO05D000042 2.5e-06 56.6 137 29.9
Haze_04284 Corylus avellana HOM05D000092 ORTHO05D000042 2.5e-06 56.6 131 29.8
Dinv07581 Davidia involucrata HOM05D000092 ORTHO05D000042 2.5e-06 56.6 100 30.0
Gohir.D11G325601 Gossypium hirsutum HOM05D000092 ORTHO05D000042 2.5e-06 56.6 160 28.8
Gorai.007G356800 Gossypium raimondii HOM05D000092 ORTHO05D000042 2.5e-06 56.6 112 32.1
Sabra13G0013800 Salix brachista HOM05D000092 ORTHO05D000042 2.5e-06 56.6 68 38.2
Gohir.A11G260000 Gossypium hirsutum HOM05D000092 ORTHO05D000042 3.2e-06 56.2 111 35.1
Medtr2g072150 Medicago truncatula HOM05D000092 ORTHO05D000042 3.2e-06 56.2 145 28.3
Psat5g221920 Pisum sativum HOM05D000092 ORTHO05D000042 3.2e-06 56.2 116 28.4
Rhsim02G0094400 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.2e-06 56.2 125 30.4
Sabra13G0018700 Salix brachista HOM05D000092 ORTHO05D000042 3.2e-06 56.2 88 33.0
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 3.2e-06 56.2 69 39.1
Atru.chr4.1749 Acer truncatum HOM05D000092 ORTHO05D000042 4.2e-06 55.8 162 28.4
Atru.chr5.2975 Acer truncatum HOM05D000092 ORTHO05D000042 4.2e-06 55.8 111 35.1
CsaV3_2G036120 Cucumis sativus L. HOM05D000092 ORTHO05D000042 4.2e-06 55.8 94 34.0
Glyma.06G256300 Glycine max HOM05D000092 ORTHO05D000042 4.2e-06 55.8 142 28.9
Manes.02G215000 Manihot esculenta HOM05D000092 ORTHO05D000042 4.2e-06 55.8 120 29.2
Sabra13G0015300 Salix brachista HOM05D000092 ORTHO05D000042 4.2e-06 55.8 68 38.2
Sabra13G0018900 Salix brachista HOM05D000092 ORTHO05D000042 4.2e-06 55.8 93 33.3
GSVIVG01036188001 Vitis vinifera HOM05D000092 ORTHO05D000042 4.2e-06 55.8 123 29.3
CSS0017266 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 5.5e-06 55.5 153 27.5
Ciclev10000066m.g Citrus clementina HOM05D000092 ORTHO05D000042 5.5e-06 55.5 84 39.3
Dinv10937 Davidia involucrata HOM05D000092 ORTHO05D000042 5.5e-06 55.5 108 28.7
Gorai.007G290300 Gossypium raimondii HOM05D000092 ORTHO05D000042 5.5e-06 55.5 111 34.2
Sabra13G0019600 Salix brachista HOM05D000092 ORTHO05D000042 5.5e-06 55.5 65 40.0
CiPaw.16G081300 Carya illinoinensis HOM05D000092 ORTHO05D000042 7.2e-06 55.1 125 32.8
Potri.013G015900 Populus trichocarpa HOM05D000092 ORTHO05D000042 7.2e-06 55.1 91 35.2
Manes.02G215615 Manihot esculenta HOM05D000092 ORTHO05D000042 9.4e-06 54.7 145 30.3
PSO675G5866 Papaver somniferum HOM05D000092 ORTHO05D000042 9.4e-06 54.7 94 35.1


User provided reference genes

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