Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 3.2e-30 134.4 67 100.0
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 4.6e-21 104.0 70 75.7
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 1.3e-15 85.9 61 72.1
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 2.9e-15 84.7 63 68.3
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 1.4e-14 82.4 63 65.1
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 1.9e-14 82.0 68 67.6
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 1.9e-14 82.0 65 72.3
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 7.1e-14 80.1 66 69.7
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 7.1e-14 80.1 64 68.8
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 1.2e-13 79.3 68 66.2
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 1.2e-13 79.3 72 62.5
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 1.2e-13 79.3 66 63.6
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 1.2e-13 79.3 57 71.9
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 1.6e-13 79.0 57 71.9
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 2.1e-13 78.6 74 59.5
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 3.5e-13 77.8 68 64.7
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 4.6e-13 77.4 68 61.8
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 4.6e-13 77.4 61 67.2
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 6.0e-13 77.0 63 60.3
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 6.0e-13 77.0 47 83.0
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 7.9e-13 76.6 67 62.7
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 7.9e-13 76.6 61 67.2
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 1.3e-12 75.9 46 78.3
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 1.3e-12 75.9 69 62.3
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.3e-12 75.9 55 69.1
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.3e-12 75.9 55 69.1
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.3e-12 75.9 55 69.1
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.3e-12 75.9 55 69.1
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 1.3e-12 75.9 57 68.4
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 1.3e-12 75.9 59 72.9
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 1.3e-12 75.9 56 69.6
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 1.8e-12 75.5 54 72.2
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 1.8e-12 75.5 40 87.5
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 2.3e-12 75.1 62 67.7
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 2.3e-12 75.1 65 63.1
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 2.3e-12 75.1 52 78.8
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 3.0e-12 74.7 61 65.6
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 3.0e-12 74.7 63 63.5
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 3.0e-12 74.7 38 92.1
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 3.0e-12 74.7 68 61.8
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 3.0e-12 74.7 63 58.7
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 3.9e-12 74.3 40 87.5
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 3.9e-12 74.3 54 72.2
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 3.9e-12 74.3 62 64.5
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 6.7e-12 73.6 39 87.2
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 6.7e-12 73.6 64 59.4
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 8.7e-12 73.2 40 85.0
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 8.7e-12 73.2 39 87.2
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 8.7e-12 73.2 56 64.3
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 1.1e-11 72.8 40 85.0
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 1.1e-11 72.8 38 89.5
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 1.1e-11 72.8 63 63.5
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 1.5e-11 72.4 45 82.2
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 1.5e-11 72.4 45 82.2
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 2.5e-11 71.6 63 63.5
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 2.5e-11 71.6 67 61.2
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 3.3e-11 71.2 40 85.0
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 4.3e-11 70.9 61 59.0
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 4.3e-11 70.9 61 59.0
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 4.3e-11 70.9 44 77.3
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 5.6e-11 70.5 65 56.9
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 7.4e-11 70.1 45 82.2
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 7.4e-11 70.1 38 86.8
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 9.6e-11 69.7 38 84.2
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 1.3e-10 69.3 44 77.3
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 1.3e-10 69.3 48 70.8
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 1.6e-10 68.9 37 86.5
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 1.6e-10 68.9 48 70.8
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 1.6e-10 68.9 66 54.5
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 2.1e-10 68.6 39 84.6
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 2.1e-10 68.6 40 80.0
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 2.8e-10 68.2 47 74.5
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 2.8e-10 68.2 47 74.5
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 3.7e-10 67.8 47 72.3
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 3.7e-10 67.8 47 72.3
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 4.8e-10 67.4 45 75.6
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 4.8e-10 67.4 37 86.5
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 4.8e-10 67.4 58 62.1
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 6.2e-10 67.0 45 71.1
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 8.2e-10 66.6 42 73.8
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 8.2e-10 66.6 48 68.8
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 8.2e-10 66.6 45 71.1
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 1.1e-09 66.2 37 83.8
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 1.1e-09 66.2 37 78.4
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 1.4e-09 65.9 58 62.1
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 2.4e-09 65.1 57 57.9
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 3.1e-09 64.7 44 72.7
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 3.1e-09 64.7 44 72.7
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 3.1e-09 64.7 62 62.9
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 6.9e-09 63.5 37 83.8
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 6.9e-09 63.5 37 83.8
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 9.0e-09 63.2 64 53.1
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 7.6e-08 60.1 38 73.7
SEGI_07868 Sequoiadendron giganteum HOM05D007662 ORTHO05D009666 2.2e-07 58.5 39 66.7
EL10Ac4g10342 Beta vulgaris HOM05D007662 ORTHO05D009666 4.9e-07 57.4 45 57.8


User provided reference genes

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