Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0054601 Helianthus annuus HOM05D002629 ORTHO05D015691 9.1e-270 932.9 458 100.0
HanXRQChr04g0116991 Helianthus annuus HOM05D000103 ORTHO05D000049 7.5e-256 886.7 455 96.0
HanXRQChr11g0332071 Helianthus annuus HOM05D002629 ORTHO05D015691 3.5e-253 877.9 455 94.1
HanXRQChr03g0093141 Helianthus annuus HOM05D002629 ORTHO05D003221 3.1e-241 838.2 459 89.1
HanXRQChr13g0421571 Helianthus annuus HOM05D002629 ORTHO05D015691 1.5e-240 835.9 463 87.9
HanXRQChr13g0421581 Helianthus annuus HOM05D002629 ORTHO05D015691 1.5e-240 835.9 463 87.9
HanXRQChr08g0223151 Helianthus annuus HOM05D002629 ORTHO05D015691 9.8e-240 833.2 463 87.3
HanXRQChr01g0014131 Helianthus annuus HOM05D002629 ORTHO05D015691 8.3e-239 830.1 463 86.8
HanXRQChr01g0009301 Helianthus annuus HOM05D002629 ORTHO05D015691 1.2e-237 826.2 462 87.0
HanXRQChr16g0527861 Helianthus annuus HOM05D002629 ORTHO05D015691 1.2e-232 809.7 451 86.7
HanXRQChr07g0196831 Helianthus annuus HOM05D002629 ORTHO05D015691 5.3e-201 704.5 392 86.7
HanXRQChr01g0016981 Helianthus annuus HOM05D002629 ORTHO05D015691 1.1e-187 660.2 358 89.4
HanXRQChr13g0387641 Helianthus annuus HOM05D002629 ORTHO05D015691 4.5e-176 621.7 463 69.1
HanXRQChr06g0175721 Helianthus annuus HOM05D000259 ORTHO05D000155 1.5e-147 526.9 443 56.7
HanXRQChr01g0010101 Helianthus annuus HOM05D002629 ORTHO05D015691 7.3e-94 348.6 331 50.8
HanXRQChr10g0279691 Helianthus annuus HOM05D000129 ORTHO05D000144 1.3e-34 151.8 154 42.9
HanXRQChr13g0403351 Helianthus annuus HOM05D008481 ORTHO05D010853 4.1e-28 130.2 374 27.8
HanXRQChr14g0444101 Helianthus annuus HOM05D008481 ORTHO05D010853 3.8e-26 123.6 376 26.9
HanXRQChr17g0537341 Helianthus annuus HOM05D008481 ORTHO05D010853 5.0e-26 123.2 371 27.2
HanXRQChr13g0425251 Helianthus annuus HOM05D008481 ORTHO05D010853 6.6e-26 122.9 367 27.2
HanXRQChr06g0165321 Helianthus annuus HOM05D008481 ORTHO05D010853 1.5e-25 121.7 436 25.2
HanXRQChr04g0119441 Helianthus annuus HOM05D008481 ORTHO05D010853 3.3e-25 120.6 371 27.5
HanXRQChr06g0176691 Helianthus annuus HOM05D008481 ORTHO05D010853 3.3e-25 120.6 417 23.3
HanXRQChr01g0028171 Helianthus annuus HOM05D008481 ORTHO05D010853 4.2e-25 120.2 418 24.6
HanXRQChr03g0080651 Helianthus annuus HOM05D008481 ORTHO05D010853 5.5e-25 119.8 350 25.1
HanXRQChr05g0132501 Helianthus annuus HOM05D008481 ORTHO05D010853 5.5e-25 119.8 430 25.6
HanXRQChr15g0467161 Helianthus annuus HOM05D008481 ORTHO05D010853 5.5e-25 119.8 397 24.9
HanXRQChr11g0333451 Helianthus annuus HOM05D008481 ORTHO05D010853 9.5e-25 119.0 430 25.6
HanXRQChr13g0404711 Helianthus annuus HOM05D008481 ORTHO05D010853 9.5e-25 119.0 351 25.1
HanXRQChr13g0424211 Helianthus annuus HOM05D008481 ORTHO05D010853 9.5e-25 119.0 350 25.1
HanXRQChr13g0424061 Helianthus annuus HOM05D000009 ORTHO05D010853 1.2e-24 118.6 350 25.1
HanXRQChr08g0221501 Helianthus annuus HOM05D008481 ORTHO05D010853 3.6e-24 117.1 381 24.9
HanXRQChr14g0447151 Helianthus annuus HOM05D000026 ORTHO05D000127 8.0e-24 115.9 397 25.7
HanXRQChr10g0279551 Helianthus annuus HOM05D008481 ORTHO05D010853 1.0e-23 115.5 410 25.9
HanXRQChr11g0323671 Helianthus annuus HOM05D008481 ORTHO05D010853 1.4e-23 115.2 409 24.9
HanXRQChr04g0119421 Helianthus annuus HOM05D008481 ORTHO05D010853 2.3e-23 114.4 397 27.0
HanXRQChr01g0014081 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-22 112.1 442 24.7
HanXRQChr09g0247291 Helianthus annuus HOM05D000103 ORTHO05D000049 4.4e-22 110.2 372 24.2
HanXRQChr04g0098781 Helianthus annuus HOM05D008481 ORTHO05D010853 5.7e-22 109.8 411 25.8
HanXRQChr10g0304581 Helianthus annuus HOM05D008481 ORTHO05D010853 5.4e-20 103.2 401 24.9
HanXRQChr08g0216321 Helianthus annuus HOM05D000374 ORTHO05D000238 7.8e-19 99.4 423 22.7
HanXRQChr13g0421041 Helianthus annuus HOM05D008481 ORTHO05D010853 1.0e-18 99.0 447 24.8
ECA240G4703 Erigeron canadensis HOM05D008481 ORTHO05D020572 1.7e-18 98.2 418 25.4
HanXRQChr13g0406131 Helianthus annuus HOM05D008481 ORTHO05D010853 2.9e-18 97.4 359 25.1
HanXRQChr14g0443501 Helianthus annuus HOM05D001485 ORTHO05D001384 5.0e-18 96.7 213 28.6
HanXRQChr09g0238771 Helianthus annuus HOM05D008481 ORTHO05D010853 1.1e-17 95.5 318 24.2
HanXRQChr10g0292931 Helianthus annuus HOM05D008481 ORTHO05D010853 1.5e-17 95.1 343 26.2
HanXRQChr02g0036691 Helianthus annuus HOM05D008481 ORTHO05D010853 2.8e-16 90.9 410 23.9
HanXRQChr06g0175741 Helianthus annuus HOM05D008481 ORTHO05D010853 3.6e-16 90.5 161 33.5
HanXRQChr03g0068141 Helianthus annuus HOM05D008481 ORTHO05D010853 4.7e-16 90.1 384 24.0
HanXRQChr04g0099031 Helianthus annuus HOM05D008481 ORTHO05D010853 4.7e-16 90.1 315 25.7
HanXRQChr05g0143231 Helianthus annuus HOM05D008481 ORTHO05D010853 6.1e-16 89.7 380 26.6
HanXRQChr02g0039311 Helianthus annuus HOM05D008481 ORTHO05D010853 1.4e-15 88.6 162 32.7
HanXRQChr13g0423431 Helianthus annuus HOM05D008481 ORTHO05D010853 6.8e-15 86.3 161 33.5
HanXRQChr06g0178781 Helianthus annuus HOM05D008481 ORTHO05D010853 7.5e-14 82.8 213 28.2
HanXRQChr04g0123551 Helianthus annuus HOM05D008481 ORTHO05D010853 1.3e-13 82.0 215 27.0
HanXRQChr17g0545601 Helianthus annuus HOM05D008481 ORTHO05D010853 6.4e-13 79.7 386 22.0
HanXRQChr03g0068301 Helianthus annuus HOM05D008481 ORTHO05D010853 1.9e-12 78.2 190 27.4
HanXRQChr05g0131281 Helianthus annuus HOM05D008481 ORTHO05D010853 3.2e-12 77.4 163 31.9
ECA247G2483 Erigeron canadensis HOM05D008481 ORTHO05D020572 3.5e-11 73.9 432 19.9
THA.LOC104804916 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.3e-10 72.0 160 25.0
ECA246G5016 Erigeron canadensis HOM05D008481 ORTHO05D020572 2.3e-10 71.2 296 24.3
CSS0008639 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-09 68.6 162 29.0
HanXRQChr11g0322801 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-08 65.5 150 28.0
MSTRG.17282 Avicennia marina HOM05D000773 ORTHO05D000588 1.6e-08 65.1 135 28.1
ECA248G2246 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-08 63.9 160 25.0
AL249U10020 Arabidopsis lyrata HOM05D009137 ORTHO05D000001 4.7e-08 63.5 140 25.0
AL3G34990 Arabidopsis lyrata HOM05D009137 ORTHO05D000001 4.7e-08 63.5 140 25.0
HanXRQChr17g0555551 Helianthus annuus HOM05D000430 ORTHO05D010853 4.7e-08 63.5 94 35.1
Nn5g30083 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.7e-08 63.5 142 27.5
HanXRQChr14g0429821 Helianthus annuus HOM05D000002 ORTHO05D000001 6.2e-08 63.2 153 30.7
Ca_28064_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-07 61.6 158 31.0
ECA232G2570 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-07 61.6 161 26.7
ECA236G1065 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-07 61.6 186 28.0
RcHm_v2.0_Chr4g0409151 Rosa chinensis HOM05D000002 ORTHO05D000001 1.8e-07 61.6 142 28.2
ECA248G1913 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-07 61.2 173 24.9
Sp3g18990 Schrenkiella parvula HOM05D009137 ORTHO05D000001 4.0e-07 60.5 172 26.7
ECA234G3983 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-07 60.1 129 28.7
HanXRQChr12g0372911 Helianthus annuus HOM05D008481 ORTHO05D010853 5.2e-07 60.1 347 24.8
Sabra15G0058200 Salix brachista HOM05D000002 ORTHO05D000001 5.2e-07 60.1 142 28.2
TPR.G28863 Trifolium pratense HOM05D000002 ORTHO05D000001 6.8e-07 59.7 178 27.0
ECA238G1827 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-06 58.9 157 26.8
HanXRQChr03g0067731 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-06 58.9 163 28.8
BraA05t21663Z Brassica rapa HOM05D009137 ORTHO05D000001 1.5e-06 58.5 147 31.3
ECA232G1928 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 58.5 169 26.6
ECA232G1539 Erigeron canadensis HOM05D001472 ORTHO05D002655 2.0e-06 58.2 155 27.1
HanXRQChr10g0293981 Helianthus annuus HOM05D000352 ORTHO05D010853 2.0e-06 58.2 126 28.6
SHI51650 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-06 57.8 145 26.2
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 3.4e-06 57.4 139 26.6
ECA234G1594 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-06 57.0 161 26.1
Nitab4.5_0003779g0070 Nicotiana tabacum HOM05D000773 ORTHO05D000588 4.4e-06 57.0 133 27.8
ECA240G3973 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-06 56.6 160 26.2
ECA248G2743 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-06 56.6 160 26.2
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.8e-06 55.8 164 26.2


User provided reference genes

Program Settings