Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0053341 Helianthus annuus HOM05D003887 ORTHO05D048295 1.7e-34 148.7 69 100.0
ECA233G2913 Erigeron canadensis HOM05D003887 ORTHO05D004523 9.0e-12 73.2 42 76.2
HanXRQChr13g0398651 Helianthus annuus HOM05D003887 ORTHO05D004523 3.4e-11 71.2 42 73.8
HanXRQChr01g0028311 Helianthus annuus HOM05D003887 ORTHO05D004523 1.3e-10 69.3 42 71.4
Lsat_1_v5_gn_6_34741 Lactuca sativa HOM05D003887 ORTHO05D004523 2.4e-09 65.1 37 75.7
Nitab4.5_0006280g0090 Nicotiana tabacum HOM05D003887 ORTHO05D048295 2.1e-08 62.0 52 59.6
COL.COLO4_29521 Corchorus olitorius HOM05D003887 ORTHO05D004523 4.6e-08 60.8 35 74.3
Potri.016G067200 Populus trichocarpa HOM05D003887 ORTHO05D004523 6.0e-08 60.5 35 71.4
Haze_20135 Corylus avellana HOM05D003887 ORTHO05D004523 7.9e-08 60.1 35 71.4
Eucgr.G00614 Eucalyptus grandis HOM05D003887 ORTHO05D004523 7.9e-08 60.1 32 75.0
Thecc.05G108100 Theobroma cacao HOM05D003887 ORTHO05D004523 1.0e-07 59.7 35 71.4
Duzib128G1521 Durio zibethinus HOM05D003887 ORTHO05D004523 1.8e-07 58.9 35 71.4
QL02p078458 Quercus lobata HOM05D003887 ORTHO05D004523 1.8e-07 58.9 33 72.7
QL10p000363 Quercus lobata HOM05D003887 ORTHO05D004523 1.8e-07 58.9 33 72.7
TAR633G0863 Trochodendron aralioides HOM05D003887 ORTHO05D004523 1.8e-07 58.9 34 70.6
Atru.chr8.1305 Acer truncatum HOM05D003887 ORTHO05D004523 2.3e-07 58.5 35 71.4
Cc06_g20890 Coffea canephora HOM05D003887 ORTHO05D004523 2.3e-07 58.5 34 70.6
Cc06_g06820 Coffea canephora HOM05D003887 ORTHO05D004523 3.0e-07 58.2 34 70.6
CiPaw.09G022700 Carya illinoinensis HOM05D003887 ORTHO05D004523 3.9e-07 57.8 35 65.7
GSVIVG01028462001 Vitis vinifera HOM05D003887 ORTHO05D004523 3.9e-07 57.8 37 67.6
Oeu020172.1 Olea europaea HOM05D003887 ORTHO05D004523 6.7e-07 57.0 31 77.4
QL07p027116 Quercus lobata HOM05D003887 ORTHO05D004523 6.7e-07 57.0 33 72.7
Solyc10g079830.3 Solanum lycopersicum HOM05D003887 ORTHO05D004523 6.7e-07 57.0 31 77.4
Sopen10g030440 Solanum pennellii HOM05D003887 ORTHO05D004523 6.7e-07 57.0 31 77.4
FAN09G3131 Fragaria x ananassa HOM05D003887 ORTHO05D004523 8.7e-07 56.6 35 71.4
Prupe.7G091600 Prunus persica HOM05D003887 ORTHO05D004523 8.7e-07 56.6 35 68.6
FAN05G1982 Fragaria x ananassa HOM05D003887 ORTHO05D004523 1.1e-06 56.2 35 68.6
Lj9C712T7 Lonicera japonica HOM05D003887 ORTHO05D004523 1.1e-06 56.2 34 70.6
Psat3g027720 Pisum sativum HOM05D001091 ORTHO05D004523 1.1e-06 56.2 35 65.7
PGR142G0321 Punica granatum HOM05D003887 ORTHO05D004523 1.1e-06 56.2 32 75.0
RcHm_v2.0_Chr3g0476591 Rosa chinensis HOM05D003887 ORTHO05D004523 1.1e-06 56.2 35 68.6
Hma1.2p1_0969F.1_g242620 Hydrangea macrophylla HOM05D003887 ORTHO05D004523 1.5e-06 55.8 33 66.7
Nn1g06263 Nelumbo nucifera HOM05D003887 ORTHO05D004523 1.5e-06 55.8 34 64.7
CANSAT64G2672 Cannabis sativa HOM05D003887 ORTHO05D004523 1.9e-06 55.5 35 62.9
CAN.G1656.10 Capsicum annuum HOM05D003887 ORTHO05D004523 1.9e-06 55.5 31 71.0
Psat5g004600 Pisum sativum HOM05D003887 ORTHO05D004523 1.9e-06 55.5 35 62.9
arahy.Tifrunner.gnm1.ann1.97GEQU Arachis hypogaea HOM05D003887 ORTHO05D004523 2.5e-06 55.1 34 64.7
Gohir.A01G135300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 2.5e-06 55.1 35 68.6
Gohir.D04G154300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 2.5e-06 55.1 34 70.6
MD12G1043200 Malus domestica HOM05D003887 ORTHO05D004523 2.5e-06 55.1 35 65.7
Manes.08G035800 Manihot esculenta HOM05D003887 ORTHO05D004523 2.5e-06 55.1 35 65.7
Cpa.g.sc104.4 Carica papaya HOM05D003887 ORTHO05D004523 3.3e-06 54.7 38 63.2
Ciclev10013089m.g Citrus clementina HOM05D003887 ORTHO05D004523 3.3e-06 54.7 35 62.9
Gorai.012G141600 Gossypium raimondii HOM05D003887 ORTHO05D004523 3.3e-06 54.7 33 72.7
MSTRG.10420 Avicennia marina HOM05D003887 ORTHO05D004523 4.3e-06 54.3 29 72.4
MSTRG.26582 Avicennia marina HOM05D003887 ORTHO05D004523 4.3e-06 54.3 29 72.4
FvH4_6g20690 Fragaria vesca HOM05D003887 ORTHO05D004523 5.6e-06 53.9 33 69.7
FAN02G3629 Fragaria x ananassa HOM05D003887 ORTHO05D004523 5.6e-06 53.9 35 65.7
FAN14G0913 Fragaria x ananassa HOM05D003887 ORTHO05D004523 5.6e-06 53.9 33 69.7
Gohir.D01G122500 Gossypium hirsutum HOM05D003887 ORTHO05D004523 5.6e-06 53.9 35 65.7
Gorai.002G153400 Gossypium raimondii HOM05D003887 ORTHO05D004523 5.6e-06 53.9 35 65.7
TWI18G1123 Tripterygium wilfordii HOM05D003887 ORTHO05D004523 5.6e-06 53.9 33 66.7
Duzib106G1345 Durio zibethinus HOM05D003887 ORTHO05D004523 9.6e-06 53.1 35 65.7
MD14G1042300 Malus domestica HOM05D003887 ORTHO05D004523 9.6e-06 53.1 35 65.7
TPR.G25788 Trifolium pratense HOM05D003887 ORTHO05D004523 9.6e-06 53.1 33 63.6


User provided reference genes

Program Settings