Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 7.8e-152 540.4 273 100.0
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 2.3e-103 379.4 275 72.4
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 2.2e-93 346.3 271 70.1
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 3.3e-81 305.8 276 58.3
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 1.2e-75 287.3 203 72.4
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 3.9e-74 282.3 280 58.2
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 3.3e-73 279.3 218 65.6
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 3.3e-73 279.3 277 55.2
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 7.3e-73 278.1 236 62.3
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 2.8e-72 276.2 217 65.4
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 4.7e-72 275.4 278 55.0
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 1.0e-71 274.2 205 68.3
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 1.0e-71 274.2 280 54.6
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 1.4e-71 273.9 219 65.3
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 1.4e-71 273.9 275 59.3
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 3.1e-71 272.7 279 57.3
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 4.0e-71 272.3 259 59.1
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 5.2e-71 271.9 216 63.9
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 5.2e-71 271.9 219 65.3
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 6.8e-71 271.6 178 74.2
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 8.9e-71 271.2 260 54.6
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 8.9e-71 271.2 275 55.3
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 1.2e-70 270.8 276 55.1
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 1.2e-70 270.8 262 55.0
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 2.0e-70 270.0 270 54.4
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 2.0e-70 270.0 279 55.6
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 2.6e-70 269.6 205 64.9
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 5.8e-70 268.5 219 64.4
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 7.5e-70 268.1 222 61.7
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 9.8e-70 267.7 197 67.5
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.3e-69 267.3 271 55.0
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 1.3e-69 267.3 267 55.4
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 1.3e-69 267.3 278 53.6
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 1.3e-69 267.3 203 66.5
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 1.7e-69 266.9 254 57.1
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 2.2e-69 266.5 201 66.2
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 4.9e-69 265.4 215 63.7
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 6.4e-69 265.0 279 55.9
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 8.3e-69 264.6 236 57.2
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 1.4e-68 263.8 202 65.3
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 1.9e-68 263.5 279 53.0
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 2.4e-68 263.1 203 64.0
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 4.1e-68 262.3 233 60.5
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 1.2e-67 260.8 208 63.9
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 2.0e-67 260.0 289 51.6
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 2.7e-67 259.6 276 53.6
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 4.6e-67 258.8 274 52.9
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 1.0e-66 257.7 206 63.1
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 2.3e-66 256.5 197 65.0
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 3.0e-66 256.1 212 59.0
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 3.0e-66 256.1 203 65.0
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 6.6e-66 255.0 219 60.7
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 1.1e-65 254.2 213 60.1
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 1.5e-65 253.8 202 61.9
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 3.3e-65 252.7 248 54.0
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 4.3e-65 252.3 201 62.2
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 4.3e-65 252.3 199 60.8
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 7.3e-65 251.5 246 56.1
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 9.5e-65 251.1 267 51.7
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 1.2e-64 250.8 261 54.0
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 1.2e-64 250.8 248 53.6
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 1.6e-64 250.4 275 52.0
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 2.1e-64 250.0 256 52.7
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 2.8e-64 249.6 210 59.0
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 6.2e-64 248.4 225 56.9
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 1.1e-63 247.7 193 63.2
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 1.8e-63 246.9 210 63.3
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 5.2e-63 245.4 203 60.6
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 2.0e-62 243.4 203 59.6
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.6e-62 243.0 264 53.0
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 3.4e-62 242.7 260 50.8
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 1.3e-61 240.7 210 57.1
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 1.3e-61 240.7 214 56.5
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 4.9e-61 238.8 275 48.4
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 1.1e-60 237.7 190 59.5
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 1.4e-60 237.3 271 49.8
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 1.9e-60 236.9 297 48.5
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 1.2e-59 234.2 267 50.2
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 2.1e-59 233.4 269 49.1
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 1.7e-58 230.3 210 55.2
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 2.3e-58 229.9 263 48.3
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 2.3e-58 229.9 187 61.0
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 3.0e-58 229.6 269 48.7
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 5.6e-57 225.3 268 49.3
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 7.3e-57 224.9 217 55.8
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 1.2e-56 224.2 154 72.7
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 1.4e-55 220.7 287 46.0
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 4.0e-55 219.2 202 55.9
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 8.9e-55 218.0 321 43.9
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 3.4e-54 216.1 167 63.5
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 9.9e-54 214.5 154 68.8
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 1.3e-53 214.2 263 47.9
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 6.4e-53 211.8 295 46.1
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 4.1e-52 209.1 153 70.6
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 5.4e-52 208.8 276 46.7
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 3.0e-50 203.0 221 51.6
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 5.1e-50 202.2 209 54.1
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 5.1e-50 202.2 246 45.9
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 7.3e-49 198.4 144 68.1
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 3.6e-48 196.1 177 59.9
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 8.1e-48 194.9 167 56.9
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 6.4e-45 185.3 209 51.7
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 8.4e-45 184.9 202 46.5
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 1.5e-41 174.1 132 60.6
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 3.3e-41 172.9 145 59.3
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 1.1e-39 167.9 236 40.3
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 1.8e-39 167.2 154 58.4
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.5e-38 164.1 113 70.8
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 2.6e-38 163.3 199 45.7
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 4.2e-36 156.0 199 43.2
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 3.0e-34 149.8 180 46.7
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 8.1e-32 141.7 215 39.5
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 1.7e-21 107.5 196 34.7
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 1.7e-21 107.5 196 34.7
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 1.7e-21 107.5 87 63.2
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 5.5e-20 102.4 123 40.7
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 9.3e-20 101.7 111 44.1
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 2.1e-19 100.5 133 44.4
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 4.6e-19 99.4 227 32.6
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 1.4e-15 87.8 202 32.7
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 4.1e-15 86.3 100 50.0
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 1.0e-13 81.6 103 44.7
Peaxi162Scf00767g00522 Petunia axillaris HOM05D001890 ORTHO05D008163 7.4e-09 65.5 261 26.8
Lj3C241T8 Lonicera japonica HOM05D001890 ORTHO05D008163 2.8e-08 63.5 122 35.2
SalBow1G6520 Salvia bowleyana HOM05D001890 ORTHO05D008163 5.9e-06 55.8 96 39.6


User provided reference genes

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