Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 1.3e-116 423.3 256 100.0
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 3.1e-57 226.1 265 52.8
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 3.9e-52 209.1 263 52.1
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 1.0e-36 157.9 122 100.0
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 2.4e-33 146.7 282 37.9
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 1.9e-30 137.1 275 38.2
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 7.1e-30 135.2 281 37.7
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 7.1e-30 135.2 311 37.0
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 2.7e-29 133.3 331 33.8
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 1.1e-27 127.9 302 37.4
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 1.5e-27 127.5 295 35.6
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 2.5e-27 126.7 303 37.6
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 4.3e-27 125.9 288 37.2
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 9.6e-27 124.8 279 36.6
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 9.6e-27 124.8 220 40.5
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 1.3e-26 124.4 295 36.3
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 2.1e-26 123.6 303 35.0
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 2.1e-26 123.6 277 36.8
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 2.8e-26 123.2 220 40.5
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 4.8e-26 122.5 300 36.7
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 8.2e-26 121.7 292 37.0
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 4.0e-25 119.4 286 37.4
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 5.3e-25 119.0 268 35.8
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 6.9e-25 118.6 303 36.0
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 6.9e-25 118.6 291 35.1
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 6.9e-25 118.6 274 35.0
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 6.9e-25 118.6 299 36.5
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 9.0e-25 118.2 232 39.2
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 2.0e-24 117.1 329 31.9
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 2.6e-24 116.7 277 35.4
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 2.6e-24 116.7 259 35.5
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 3.4e-24 116.3 274 34.3
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 4.5e-24 115.9 281 35.9
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 1.0e-23 114.8 261 36.8
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 1.3e-23 114.4 224 40.6
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 1.7e-23 114.0 240 38.8
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 4.9e-23 112.5 277 34.3
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 8.4e-23 111.7 269 36.1
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 1.1e-22 111.3 279 35.5
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 1.4e-22 110.9 294 34.7
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.4e-22 110.9 260 34.6
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 1.9e-22 110.5 260 34.6
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 2.5e-22 110.2 260 36.2
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 2.5e-22 110.2 294 34.7
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 5.5e-22 109.0 269 35.7
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 5.5e-22 109.0 329 31.9
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 9.3e-22 108.2 227 37.0
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 9.3e-22 108.2 274 33.9
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 6.0e-21 105.5 270 37.4
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 6.0e-21 105.5 301 32.9
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 1.0e-20 104.8 319 32.6
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 1.0e-20 104.8 291 33.3
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 1.0e-20 104.8 270 36.3
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 1.8e-20 104.0 271 32.8
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 2.3e-20 103.6 271 32.8
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.5e-19 100.9 264 31.1
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 1.9e-19 100.5 293 33.8
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 4.3e-19 99.4 212 37.3
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 1.3e-18 97.8 278 33.8
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 2.8e-18 96.7 255 34.9
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 4.8e-18 95.9 272 32.4
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 8.2e-18 95.1 283 33.9
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 8.2e-18 95.1 272 35.3
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 8.2e-18 95.1 289 32.9
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 5.3e-17 92.4 270 31.5
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 1.2e-16 91.3 197 35.5
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 1.2e-16 91.3 264 32.2
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 1.2e-16 91.3 319 28.8
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 1.2e-16 91.3 285 37.2
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 1.0e-15 88.2 273 32.6
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 1.3e-15 87.8 283 31.8
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 3.8e-15 86.3 283 32.5
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 8.5e-15 85.1 287 32.4
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 1.1e-14 84.7 281 32.0
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 1.4e-14 84.3 288 32.3
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 5.5e-14 82.4 185 35.7
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 9.4e-14 81.6 275 32.4
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 1.6e-13 80.9 279 33.0
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.6e-13 80.9 289 31.8
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 1.6e-13 80.9 252 35.7
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 3.6e-13 79.7 279 30.8
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 3.6e-13 79.7 288 30.6
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 6.1e-13 79.0 272 31.2
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 1.0e-12 78.2 270 31.9
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.4e-12 77.8 159 39.0
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.9e-12 76.3 288 31.2
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 6.7e-12 75.5 118 44.1
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 8.8e-12 75.1 277 31.8
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 1.1e-11 74.7 217 32.7
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 7.4e-11 72.0 127 37.8
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 1.4e-09 67.8 131 37.4
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 1.5e-08 64.3 103 41.7
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 2.5e-06 57.0 127 33.1


User provided reference genes

Program Settings