Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 1.3e-52 209.5 108 100.0
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 3.4e-42 174.9 108 80.6
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 1.3e-41 172.9 108 80.6
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 6.5e-41 170.6 108 78.7
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 1.8e-30 136.0 106 62.3
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 6.7e-30 134.0 106 62.3
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 1.1e-29 133.3 106 63.2
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 1.1e-29 133.3 106 62.3
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 1.9e-29 132.5 106 60.4
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 3.3e-29 131.7 104 62.5
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 3.3e-29 131.7 104 62.5
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 3.3e-29 131.7 106 61.3
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 4.3e-29 131.3 104 61.5
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 5.7e-29 131.0 104 60.6
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 7.4e-29 130.6 104 60.6
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 7.4e-29 130.6 104 61.5
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 7.4e-29 130.6 104 61.5
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 1.3e-28 129.8 104 61.5
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 1.3e-28 129.8 103 62.1
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.3e-28 129.8 106 59.4
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 1.3e-28 129.8 106 60.4
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 1.3e-28 129.8 106 59.4
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.3e-28 129.8 106 60.4
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.3e-28 129.8 106 59.4
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.2e-28 129.0 106 60.4
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 2.2e-28 129.0 104 58.7
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 2.8e-28 128.6 104 56.7
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 3.7e-28 128.3 103 61.2
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 3.7e-28 128.3 106 59.4
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 3.7e-28 128.3 106 58.5
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 3.7e-28 128.3 106 58.5
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 4.8e-28 127.9 106 58.5
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 4.8e-28 127.9 104 58.7
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 4.8e-28 127.9 104 56.7
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 6.3e-28 127.5 106 59.4
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 6.3e-28 127.5 106 59.4
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 8.2e-28 127.1 104 59.6
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 8.2e-28 127.1 104 55.8
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 8.2e-28 127.1 104 56.7
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 1.1e-27 126.7 104 61.5
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.1e-27 126.7 104 58.7
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.4e-27 126.3 106 57.5
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 1.4e-27 126.3 104 57.7
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 1.4e-27 126.3 104 60.6
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 1.4e-27 126.3 104 58.7
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 1.8e-27 125.9 104 61.5
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.8e-27 125.9 106 59.4
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 1.8e-27 125.9 105 58.1
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 1.8e-27 125.9 106 61.3
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 2.4e-27 125.6 103 59.2
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 2.4e-27 125.6 106 57.5
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 2.4e-27 125.6 106 57.5
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 3.1e-27 125.2 104 58.7
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 3.1e-27 125.2 104 58.7
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 5.3e-27 124.4 106 57.5
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 5.3e-27 124.4 104 57.7
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 6.9e-27 124.0 106 57.5
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 6.9e-27 124.0 104 58.7
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 9.1e-27 123.6 104 58.7
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 9.1e-27 123.6 100 61.0
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 9.1e-27 123.6 104 58.7
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 1.2e-26 123.2 104 54.8
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 1.2e-26 123.2 104 57.7
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 1.5e-26 122.9 101 58.4
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 1.5e-26 122.9 104 56.7
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 1.5e-26 122.9 104 59.6
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 1.5e-26 122.9 100 61.0
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 1.5e-26 122.9 95 62.1
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 2.0e-26 122.5 104 57.7
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 2.6e-26 122.1 104 58.7
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 2.6e-26 122.1 103 58.3
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 3.4e-26 121.7 103 56.3
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 3.4e-26 121.7 106 57.5
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 3.4e-26 121.7 104 55.8
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 4.5e-26 121.3 104 56.7
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 4.5e-26 121.3 105 54.3
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 5.9e-26 120.9 104 56.7
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 5.9e-26 120.9 105 57.1
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 5.9e-26 120.9 104 57.7
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 1.0e-25 120.2 104 57.7
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.0e-25 120.2 104 57.7
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 1.3e-25 119.8 103 56.3
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.3e-25 119.8 104 56.7
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 1.3e-25 119.8 104 57.7
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 1.3e-25 119.8 104 56.7
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 1.7e-25 119.4 105 55.2
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 2.2e-25 119.0 104 54.8
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 2.2e-25 119.0 104 56.7
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 2.2e-25 119.0 104 56.7
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 2.2e-25 119.0 104 57.7
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 2.9e-25 118.6 103 56.3
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 5.0e-25 117.9 103 55.3
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 5.0e-25 117.9 104 52.9
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 6.5e-25 117.5 104 55.8
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 1.4e-24 116.3 104 51.9
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 3.2e-24 115.2 104 56.7
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 7.2e-24 114.0 99 56.6
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 9.4e-24 113.6 104 52.9
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 4.7e-23 111.3 105 52.4
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 2.3e-22 109.0 105 52.4
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 5.1e-22 107.8 134 44.8
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 5.1e-22 107.8 92 57.6
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 2.6e-21 105.5 105 50.5
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 3.3e-21 105.1 106 51.9
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 4.4e-21 104.8 106 51.9
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 7.4e-21 104.0 92 56.5
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 9.7e-21 103.6 133 43.6
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 9.7e-21 103.6 103 51.5
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 2.8e-20 102.1 93 53.8
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 1.4e-19 99.8 102 47.1
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 2.4e-19 99.0 97 49.5
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 9.1e-19 97.1 76 65.8
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 9.1e-19 97.1 77 61.0
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 3.4e-18 95.1 76 60.5
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 4.5e-18 94.7 90 51.1
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 7.7e-18 94.0 75 60.0
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 2.9e-17 92.0 79 55.7
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 3.8e-17 91.7 106 47.2
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 9.4e-16 87.0 91 48.4
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 1.0e-14 83.6 86 53.5
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.4e-14 83.2 70 58.6
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.4e-14 83.2 70 58.6
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 2.6e-13 79.0 77 54.5
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 3.3e-13 78.6 78 51.3
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 8.2e-12 73.9 65 53.8
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 1.8e-11 72.8 97 42.3
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 2.4e-11 72.4 104 40.4
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.2e-10 70.1 115 38.3
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 2.5e-08 62.4 56 58.9
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 1.4e-06 56.6 57 52.6
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 1.8e-06 56.2 82 43.9


User provided reference genes

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