Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0051151 Helianthus annuus HOM05D007749 ORTHO05D009809 1.5e-65 252.7 128 100.0
Lsat_1_v5_gn_5_23460 Lactuca sativa HOM05D007749 ORTHO05D009809 5.7e-44 181.0 125 72.0
ECA246G4014 Erigeron canadensis HOM05D007749 ORTHO05D009809 1.0e-40 170.2 120 70.0
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 6.5e-40 167.5 122 66.4
TAR633G0982 Trochodendron aralioides HOM05D007749 ORTHO05D009809 6.1e-38 161.0 120 65.8
Rhsim09G0028100 Rhododendron simsii HOM05D007749 ORTHO05D009809 1.8e-37 159.5 123 61.8
CDE04G2919 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 1.1e-36 156.8 123 63.4
CANSAT56G0324 Cannabis sativa HOM05D007749 ORTHO05D009809 1.5e-36 156.4 122 60.7
CANSAT56G2176 Cannabis sativa HOM05D007749 ORTHO05D009809 1.5e-36 156.4 122 60.7
AUR62005121 Chenopodium quinoa HOM05D007749 ORTHO05D009809 2.5e-36 155.6 117 64.1
CDE07G1555 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 7.4e-36 154.1 123 62.6
Manes.11G120200 Manihot esculenta HOM05D007749 ORTHO05D009809 7.4e-36 154.1 122 59.0
AUR62000855 Chenopodium quinoa HOM05D007749 ORTHO05D009809 3.7e-35 151.8 117 61.5
ClCG08G004660 Citrullus lanatus HOM05D007749 ORTHO05D009809 1.1e-34 150.2 118 61.9
CsaV3_6G003910 Cucumis sativus L. HOM05D007749 ORTHO05D009809 1.1e-34 150.2 118 61.9
Oeu037445.1 Olea europaea HOM05D007749 ORTHO05D009809 2.4e-34 149.1 122 58.2
GSVIVG01010752001 Vitis vinifera HOM05D007749 ORTHO05D009809 2.4e-34 149.1 109 67.9
Duzib151G1147 Durio zibethinus HOM05D007749 ORTHO05D009809 3.1e-34 148.7 124 55.6
MELO3C011656.2 Cucumis melo HOM05D007749 ORTHO05D009809 1.5e-33 146.4 118 61.9
Psat1g007040 Pisum sativum HOM05D007749 ORTHO05D009809 7.7e-33 144.1 122 57.4
Glyma.13G344000 Glycine max HOM05D007749 ORTHO05D009809 1.0e-32 143.7 115 59.1
Sed0008576 Sechium edule HOM05D007749 ORTHO05D009809 1.0e-32 143.7 120 57.5
Lalb_Chr14g0372461 Lupinus albus HOM05D007749 ORTHO05D009809 1.7e-32 142.9 117 57.3
COL.COLO4_07660 Corchorus olitorius HOM05D007749 ORTHO05D009809 2.2e-32 142.5 118 56.8
THA.LOC104803661 Tarenaya hassleriana HOM05D007749 ORTHO05D009809 2.9e-32 142.1 124 56.5
Medtr2g098870 Medicago truncatula HOM05D007749 ORTHO05D009809 3.8e-32 141.7 119 60.5
Phvul.005G152700 Phaseolus vulgaris HOM05D007749 ORTHO05D009809 1.4e-31 139.8 114 57.0
Thecc.04G180100 Theobroma cacao HOM05D007749 ORTHO05D009809 1.4e-31 139.8 124 53.2
Gohir.A10G136900 Gossypium hirsutum HOM05D007749 ORTHO05D009809 1.9e-31 139.4 124 53.2
Eucgr.H00373 Eucalyptus grandis HOM05D007749 ORTHO05D009809 2.5e-31 139.0 123 59.3
Lj3g0008958 Lotus japonicus HOM05D007749 ORTHO05D009809 2.5e-31 139.0 118 54.2
VMungo1080G1081 Vigna mungo HOM05D007749 ORTHO05D009809 4.2e-31 138.3 113 56.6
Gohir.D10G129800 Gossypium hirsutum HOM05D007749 ORTHO05D009809 9.4e-31 137.1 124 52.4
Gorai.011G143100 Gossypium raimondii HOM05D007749 ORTHO05D009809 9.4e-31 137.1 124 53.2
PGR142G0736 Punica granatum HOM05D007749 ORTHO05D009809 9.4e-31 137.1 123 56.1
C04p70340 Brassica napus HOM05D007749 ORTHO05D009809 1.2e-30 136.7 126 53.2
BolC4t28537H Brassica oleracea HOM05D007749 ORTHO05D009809 1.2e-30 136.7 126 53.2
CARHR138400 Cardamine hirsuta HOM05D007749 ORTHO05D009809 2.1e-30 136.0 124 53.2
BcaC02g07190 Brassica carinata HOM05D007749 ORTHO05D009809 2.7e-30 135.6 126 52.4
BraA04t18728Z Brassica rapa HOM05D007749 ORTHO05D009809 2.7e-30 135.6 126 52.4
MD04G1040200 Malus domestica HOM05D007749 ORTHO05D009809 2.7e-30 135.6 119 54.6
Sp4g25410 Schrenkiella parvula HOM05D007749 ORTHO05D009809 2.7e-30 135.6 124 53.2
TWI15G0305 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 2.7e-30 135.6 124 54.8
TWI15G0741 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 2.7e-30 135.6 124 54.8
A04p32650 Brassica napus HOM05D007749 ORTHO05D009809 3.6e-30 135.2 126 52.4
Sc25g0002390 Simmondsia chinensis HOM05D007749 ORTHO05D009809 3.6e-30 135.2 101 63.4
Aqoxy7G01786 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 4.7e-30 134.8 117 55.6
BcaB06g29301 Brassica carinata HOM05D007749 ORTHO05D009809 4.7e-30 134.8 126 52.4
Cc00_g14450 Coffea canephora HOM05D007749 ORTHO05D009809 4.7e-30 134.8 121 53.7
Thhalv10001764m.g Eutrema salsugineum HOM05D007749 ORTHO05D009809 4.7e-30 134.8 124 54.0
Aa31LG1G25110 Aethionema arabicum HOM05D007749 ORTHO05D009809 6.1e-30 134.4 124 54.0
Atru.chr3.1496 Acer truncatum HOM05D007749 ORTHO05D009809 1.8e-29 132.9 124 51.6
Aqoxy7G01782 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 1.8e-29 132.9 117 54.7
AT2G43310 Arabidopsis thaliana HOM05D007749 ORTHO05D009809 1.8e-29 132.9 124 52.4
Nitab4.5_0005487g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 2.3e-29 132.5 122 54.1
QL10p048728 Quercus lobata HOM05D007749 ORTHO05D009809 3.9e-29 131.7 119 53.8
PGSC0003DMG400020513 Solanum tuberosum HOM05D007749 ORTHO05D009809 6.7e-29 131.0 119 54.6
Sopen08g003040 Solanum pennellii HOM05D007749 ORTHO05D009809 1.1e-28 130.2 119 54.6
AL4G41990 Arabidopsis lyrata HOM05D007749 ORTHO05D009809 2.0e-28 129.4 122 53.3
Carub.0004s2577 Capsella rubella HOM05D007749 ORTHO05D009809 3.3e-28 128.6 124 51.6
CAN.G845.29 Capsicum annuum HOM05D007749 ORTHO05D009809 5.7e-28 127.9 120 53.3
Potri.017G030200 Populus trichocarpa HOM05D007749 ORTHO05D009809 7.4e-28 127.5 122 57.4
CiPaw.02G055000 Carya illinoinensis HOM05D007749 ORTHO05D009809 9.7e-28 127.1 119 51.3
Migut.B01511 Erythranthe guttata HOM05D007749 ORTHO05D009809 1.7e-27 126.3 121 51.2
unitig_61.g26426 Utricularia gibba HOM05D007749 ORTHO05D009809 1.7e-27 126.3 121 51.2
Sc04g0006060 Simmondsia chinensis HOM05D007749 ORTHO05D009809 2.2e-27 125.9 102 57.8
Sabra07G0104500 Salix brachista HOM05D007749 ORTHO05D009809 4.8e-27 124.8 122 55.7
Potri.007G128100 Populus trichocarpa HOM05D007749 ORTHO05D009809 6.3e-27 124.4 122 55.7
SalBow7G2644 Salvia bowleyana HOM05D007749 ORTHO05D009809 1.1e-26 123.6 115 54.8
DCAR_008501 Daucus carota HOM05D007749 ORTHO05D009809 7.0e-26 120.9 115 52.2
Ciclev10022681m.g Citrus clementina HOM05D007749 ORTHO05D009809 2.6e-25 119.0 121 50.4
Glyma.15G030300 Glycine max HOM05D007749 ORTHO05D009809 5.9e-25 117.9 105 51.4
SGA_v2.0_scaffold52G19242 Striga asiatica HOM05D007749 ORTHO05D009809 5.9e-25 117.9 123 50.4
Ca_01260_v3 Cicer arietinum L. HOM05D007749 ORTHO05D009809 1.0e-24 117.1 88 58.0
ATR0824G043 Amborella trichopoda HOM05D007749 ORTHO05D009809 1.3e-24 116.7 110 50.0
MD07G1010900 Malus domestica HOM05D007749 ORTHO05D009809 2.5e-23 112.5 107 50.5
MD07G1093600 Malus domestica HOM05D007749 ORTHO05D009809 5.5e-23 111.3 96 56.2
Prupe.1G192700 Prunus persica HOM05D007749 ORTHO05D009809 5.5e-23 111.3 108 53.7
HPP92_012796 Vanilla planifolia HOM05D007749 ORTHO05D009809 5.5e-23 111.3 117 49.6
FvH4_4g10741 Fragaria vesca HOM05D007749 ORTHO05D009809 7.2e-23 110.9 120 49.2
BcaB06g29300 Brassica carinata HOM05D007749 ORTHO05D009809 2.7e-22 109.0 100 53.0
Actinidia34603 Actinidia chinensis HOM05D007749 ORTHO05D009809 4.1e-18 95.1 127 45.7
PGSC0003DMG400020496 Solanum tuberosum HOM05D007749 ORTHO05D009809 5.3e-18 94.7 89 49.4
Prupe.1G193800 Prunus persica HOM05D007749 ORTHO05D009809 7.7e-17 90.9 89 47.2
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 1.7e-16 89.7 100 45.0
Actinidia35976 Actinidia chinensis HOM05D007749 ORTHO05D009809 5.0e-16 88.2 122 45.1
HPP92_012728 Vanilla planifolia HOM05D007749 ORTHO05D009809 1.2e-14 83.6 117 42.7
Nitab4.5_0010461g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 1.6e-14 83.2 77 49.4
QL04p015298 Quercus lobata HOM05D007749 ORTHO05D009809 4.0e-13 78.6 89 42.7
SEGI_37948 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 4.8e-11 71.6 114 32.5
vmacro02359 Vaccinium macrocarpon HOM05D007749 ORTHO05D009809 2.9e-08 62.4 53 50.9
MD08G1180100 Malus domestica HOM05D007749 ORTHO05D009809 1.5e-07 60.1 56 55.4


User provided reference genes

Program Settings