Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 2.9e-199 698.4 355 100.0
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 1.6e-136 490.0 382 71.2
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 6.2e-125 451.4 359 71.0
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 2.8e-109 399.4 390 63.1
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 2.3e-103 379.8 367 58.9
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 8.5e-90 334.7 370 54.3
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 6.1e-88 328.6 387 53.5
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 5.0e-82 308.9 276 60.9
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 1.1e-81 307.8 356 54.5
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 3.2e-81 306.2 355 51.8
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 8.0e-80 301.6 334 56.6
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 1.4e-79 300.8 314 54.8
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 3.0e-79 299.7 334 54.5
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 1.5e-78 297.4 344 55.8
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 2.6e-78 296.6 366 51.1
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 3.4e-78 296.2 365 51.0
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 7.5e-78 295.0 375 51.7
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 9.7e-78 294.7 331 53.5
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 9.7e-78 294.7 344 54.1
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 1.7e-77 293.9 343 51.9
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 2.2e-77 293.5 373 51.7
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 6.3e-77 292.0 364 50.8
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 6.3e-77 292.0 374 51.1
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 8.3e-77 291.6 353 50.4
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 3.1e-76 289.7 335 55.2
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 3.1e-76 289.7 344 53.2
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 3.1e-76 289.7 363 50.1
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 4.1e-76 289.3 350 51.7
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 5.3e-76 288.9 328 54.6
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 3.5e-75 286.2 362 51.4
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 7.7e-75 285.0 375 50.7
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 1.3e-74 284.3 391 48.6
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 1.3e-74 284.3 334 55.4
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 2.9e-74 283.1 348 51.1
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 2.9e-74 283.1 347 51.3
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 2.9e-74 283.1 345 50.1
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 5.0e-74 282.3 341 52.2
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 6.5e-74 282.0 360 51.1
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 6.5e-74 282.0 371 48.5
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 1.9e-73 280.4 340 50.6
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 1.9e-73 280.4 343 50.1
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 2.5e-73 280.0 284 56.7
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 1.2e-72 277.7 329 54.7
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 2.1e-72 276.9 358 49.4
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 2.1e-72 276.9 333 52.0
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.0e-71 274.6 345 52.5
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 1.8e-71 273.9 344 52.3
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 4.0e-71 272.7 370 48.1
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 5.2e-71 272.3 371 48.2
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 6.8e-71 271.9 345 50.4
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 2.0e-70 270.4 345 48.4
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 5.7e-70 268.9 344 52.3
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 9.8e-70 268.1 376 46.5
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 3.7e-69 266.2 284 54.6
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 6.3e-69 265.4 369 46.6
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 8.3e-69 265.0 415 42.9
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 3.1e-68 263.1 322 49.7
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 3.1e-68 263.1 366 50.3
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 9.1e-68 261.5 307 54.7
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 1.2e-67 261.2 320 50.0
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 5.0e-66 255.8 321 51.7
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 1.5e-65 254.2 336 48.5
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 1.9e-65 253.8 330 48.2
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 2.5e-65 253.4 301 53.5
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 3.6e-64 249.6 337 49.9
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 4.7e-64 249.2 298 51.0
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.0e-63 248.1 273 52.7
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 3.0e-63 246.5 324 47.5
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 6.8e-63 245.4 277 53.4
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 1.7e-61 240.7 358 44.4
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 1.4e-60 237.7 368 45.4
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 2.4e-60 236.9 393 43.8
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 4.1e-60 236.1 310 47.4
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 5.4e-60 235.7 274 51.5
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 2.0e-59 233.8 336 49.4
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 2.0e-59 233.8 371 43.7
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 4.5e-59 232.6 336 47.3
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 5.9e-59 232.3 356 44.9
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 8.6e-58 228.4 313 46.6
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 1.9e-57 227.3 368 44.3
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 5.6e-57 225.7 371 44.5
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 7.3e-57 225.3 191 62.8
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 2.3e-55 220.3 294 51.7
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 1.5e-54 217.6 208 58.7
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 3.4e-54 216.5 219 55.3
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 5.8e-54 215.7 364 43.4
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 2.2e-53 213.8 319 45.8
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 8.3e-53 211.8 363 41.6
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 8.6e-50 201.8 291 47.4
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 3.3e-49 199.9 317 42.3
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 2.8e-48 196.8 332 42.5
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 8.1e-48 195.3 364 42.0
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 2.3e-47 193.7 346 40.2
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 3.1e-47 193.4 392 40.1
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 5.8e-46 189.1 340 40.9
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 2.2e-45 187.2 353 41.6
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 4.1e-44 183.0 349 40.7
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 2.5e-41 173.7 355 38.9
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 4.4e-38 162.9 321 40.5
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 1.7e-37 161.0 306 41.2
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 4.9e-37 159.5 190 51.1
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 4.1e-36 156.4 273 43.2
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 1.6e-35 154.5 189 47.1
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 1.7e-34 151.0 338 39.6
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 2.3e-34 150.6 309 39.2
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 1.5e-33 147.9 301 41.5
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 3.3e-33 146.7 352 37.2
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 7.3e-33 145.6 353 37.4
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 9.6e-33 145.2 334 38.0
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 1.2e-32 144.8 353 37.4
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 3.6e-32 143.3 349 36.1
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 3.6e-32 143.3 349 36.1
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 6.2e-32 142.5 260 41.5
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 5.2e-31 139.4 344 35.8
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 1.2e-30 138.3 324 37.7
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 2.6e-30 137.1 324 37.7
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 2.6e-30 137.1 309 37.5
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 5.8e-30 136.0 322 37.9
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 6.4e-29 132.5 321 37.7
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 7.1e-28 129.0 327 36.7
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 6.0e-27 125.9 345 33.6
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 5.1e-26 122.9 231 42.4
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 1.5e-25 121.3 248 37.5
Ah.10g025860 Amaranthus hybridus HOM05D005141 ORTHO05D006250 2.9e-21 107.1 202 41.1
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 2.9e-21 107.1 165 43.0
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 2.3e-18 97.4 140 45.0
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 3.9e-18 96.7 193 40.4
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 4.3e-17 93.2 130 45.4
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 1.6e-16 91.3 312 30.8
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 3.6e-16 90.1 115 45.2
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 1.2e-14 85.1 59 71.2
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 1.7e-13 81.3 56 69.6
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 2.1e-11 74.3 76 50.0
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 3.3e-09 67.0 168 33.9
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 9.6e-09 65.5 184 33.7
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 1.8e-07 61.2 169 33.7


User provided reference genes

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