Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 8.0e-177 623.6 310 100.0
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 6.4e-158 560.8 314 89.8
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 2.0e-151 539.3 311 85.9
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 2.8e-145 518.8 313 83.1
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 9.3e-125 450.7 290 74.5
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 2.7e-124 449.1 296 74.3
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 2.7e-124 449.1 304 72.7
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 3.5e-124 448.7 300 74.0
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 6.0e-124 448.0 287 75.3
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 6.0e-124 448.0 296 74.0
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 1.3e-123 446.8 285 76.8
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.8e-123 446.4 288 74.7
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 2.3e-123 446.0 287 74.9
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 3.9e-123 445.3 293 74.4
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 3.9e-123 445.3 302 71.2
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 8.7e-123 444.1 303 72.3
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 1.5e-122 443.4 288 74.0
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 3.3e-122 442.2 287 76.0
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 7.4e-122 441.0 272 78.7
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 9.6e-122 440.7 287 73.9
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 9.6e-122 440.7 305 70.8
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.3e-121 440.3 293 73.0
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.6e-121 439.9 303 71.6
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.1e-120 437.2 285 74.7
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 1.1e-120 437.2 307 70.7
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.4e-120 436.0 287 73.2
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 3.1e-120 435.6 293 71.7
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 3.1e-120 435.6 288 73.6
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 5.3e-120 434.9 290 73.4
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 6.9e-120 434.5 290 74.1
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.2e-119 433.7 290 72.1
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 1.5e-119 433.3 304 69.1
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 2.6e-119 432.6 290 71.7
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 3.4e-119 432.2 290 72.8
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 4.5e-119 431.8 295 71.2
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 4.5e-119 431.8 287 72.8
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 7.6e-119 431.0 290 71.4
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 7.6e-119 431.0 290 71.7
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.7e-118 429.9 287 72.1
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 4.9e-118 428.3 293 70.3
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 6.4e-118 427.9 290 73.1
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 8.4e-118 427.6 296 71.6
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 4.2e-117 425.2 293 70.6
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 5.5e-117 424.9 301 67.4
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 9.3e-117 424.1 287 69.3
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 1.6e-116 423.3 284 73.6
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 6.0e-116 421.4 304 67.4
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 6.0e-116 421.4 303 67.7
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 6.7e-115 417.9 297 67.0
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 6.7e-115 417.9 332 63.9
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 3.3e-114 415.6 292 69.2
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 3.3e-114 415.6 308 67.9
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 4.3e-114 415.2 309 68.0
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 4.3e-114 415.2 291 70.4
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 5.6e-114 414.8 302 68.2
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 5.6e-114 414.8 291 69.8
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 5.6e-114 414.8 298 67.4
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 7.4e-114 414.5 333 62.2
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 7.4e-114 414.5 298 66.8
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.3e-113 413.7 288 70.5
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.1e-113 412.9 346 61.6
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 4.8e-113 411.8 288 69.8
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.1e-112 410.6 300 67.0
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.1e-112 410.6 287 69.7
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 3.1e-112 409.1 297 67.0
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 9.0e-112 407.5 295 65.8
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.2e-111 407.1 293 68.6
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 3.4e-111 405.6 288 69.1
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.3e-110 403.7 292 68.8
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 1.7e-110 403.3 276 71.7
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 1.1e-109 400.6 284 66.5
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.5e-109 399.4 295 64.7
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 5.5e-109 398.3 293 67.6
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 9.3e-109 397.5 276 69.9
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 6.0e-108 394.8 276 69.9
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 3.9e-107 392.1 270 72.2
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 3.9e-107 392.1 287 67.9
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 6.7e-107 391.3 297 64.3
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.1e-106 390.6 269 70.6
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.4e-101 373.6 301 63.5
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 4.8e-97 358.6 294 62.2
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-96 357.5 274 66.4
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.8e-96 356.7 271 65.3
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 2.6e-95 352.8 292 57.5
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.5e-95 352.1 281 63.7
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.1e-93 347.4 304 55.9
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 2.5e-93 346.3 266 65.4
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.1e-92 341.7 299 60.9
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 7.9e-92 341.3 289 59.2
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 1.1e-90 337.4 221 74.2
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.7e-89 333.6 264 60.2
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.2e-89 331.3 277 62.5
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 4.2e-85 318.9 288 58.3
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 6.5e-78 295.0 198 71.2
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.0e-74 283.5 201 68.2
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 4.4e-74 282.3 398 41.2
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 4.8e-73 278.9 252 59.9
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 6.5e-62 241.9 144 78.5
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 8.6e-62 241.5 156 75.6
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 5.4e-56 222.2 154 70.1
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.3e-54 217.6 258 49.2
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 5.0e-54 215.7 142 74.6
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 3.4e-50 203.0 132 74.2
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 7.3e-45 185.3 143 60.8
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.0e-42 177.2 252 44.0
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.3e-38 163.7 185 51.9
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.0e-38 163.3 185 51.9
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 2.8e-36 156.8 105 71.4
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 2.9e-33 146.7 99 72.7
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.1e-27 128.3 93 61.3
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 3.4e-26 123.2 82 72.0
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 9.2e-24 115.2 66 71.2
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 8.7e-22 108.6 145 45.5
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 8.4e-17 92.0 79 59.5
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.4e-16 90.5 66 69.7
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-14 84.7 56 71.4
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 3.9e-14 83.2 60 66.7
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 4.0e-11 73.2 41 82.9
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 2.9e-09 67.0 81 44.4
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.4e-08 64.7 44 68.2
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 2.7e-07 60.5 44 68.2


User provided reference genes

Program Settings