Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0048741 Helianthus annuus HOM05D001728 ORTHO05D004174 3.2e-78 295.0 153 100.0
Lsat_1_v5_gn_1_41000 Lactuca sativa HOM05D001728 ORTHO05D004174 1.2e-29 133.7 209 45.9
ECA246G2493 Erigeron canadensis HOM05D001728 ORTHO05D004174 9.8e-27 124.0 223 42.2
HanXRQChr05g0148261 Helianthus annuus HOM05D001728 ORTHO05D004174 1.2e-21 107.1 218 39.0
Lsat_1_v5_gn_6_116240 Lactuca sativa HOM05D001728 ORTHO05D004174 8.1e-21 104.4 208 38.0
Phvul.006G117400 Phaseolus vulgaris HOM05D001728 ORTHO05D004174 8.1e-21 104.4 151 42.4
Glyma.09G036300 Glycine max HOM05D001728 ORTHO05D004174 2.3e-20 102.8 225 36.0
Nn3g21703 Nelumbo nucifera HOM05D001728 ORTHO05D004174 2.0e-19 99.8 198 36.4
GSVIVG01035008001 Vitis vinifera HOM05D001728 ORTHO05D004174 3.4e-19 99.0 211 36.5
CSS0020178 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004174 4.4e-19 98.6 210 37.1
RcHm_v2.0_Chr4g0424811 Rosa chinensis HOM05D001728 ORTHO05D004174 4.4e-19 98.6 219 33.8
Lj6C689T11 Lonicera japonica HOM05D001728 ORTHO05D004174 7.5e-19 97.8 214 36.9
MELO3C006710.2 Cucumis melo HOM05D001728 ORTHO05D004174 9.8e-19 97.4 217 34.6
Nitab4.5_0013613g0010 Nicotiana tabacum HOM05D001728 ORTHO05D004174 9.8e-19 97.4 216 37.5
VMungo0540G0586 Vigna mungo HOM05D001728 ORTHO05D004174 9.8e-19 97.4 209 36.8
CiPaw.01G139100 Carya illinoinensis HOM05D001728 ORTHO05D004174 1.3e-18 97.1 203 35.5
Sed0009760 Sechium edule HOM05D001728 ORTHO05D004174 1.3e-18 97.1 211 35.5
MBI19_g07231_MAGBIO Magnolia biondii HOM05D001728 ORTHO05D004174 1.7e-18 96.7 207 34.8
Sed0012381 Sechium edule HOM05D001728 ORTHO05D004174 1.7e-18 96.7 234 32.5
CsaV3_3G015120 Cucumis sativus L. HOM05D001728 ORTHO05D004174 2.9e-18 95.9 217 34.6
DCAR_027001 Daucus carota HOM05D001728 ORTHO05D004174 2.9e-18 95.9 210 36.2
Glyma.15G141200 Glycine max HOM05D001728 ORTHO05D004174 2.9e-18 95.9 223 35.9
Hma1.2p1_0013F.1_g008660 Hydrangea macrophylla HOM05D001728 ORTHO05D004174 2.9e-18 95.9 215 35.8
PSO170G6117 Papaver somniferum HOM05D001728 ORTHO05D004174 3.7e-18 95.5 213 35.2
DCAR_030467 Daucus carota HOM05D001728 ORTHO05D004174 6.4e-18 94.7 212 34.9
DCAR_030475 Daucus carota HOM05D001728 ORTHO05D004174 6.4e-18 94.7 212 34.9
Medtr4g121960 Medicago truncatula HOM05D001728 ORTHO05D004174 6.4e-18 94.7 225 33.3
PSO357G0012 Papaver somniferum HOM05D001728 ORTHO05D004174 6.4e-18 94.7 213 35.2
arahy.Tifrunner.gnm1.ann1.2RYD9Q Arachis hypogaea HOM05D001728 ORTHO05D004174 8.3e-18 94.4 214 32.7
AUR62016122 Chenopodium quinoa HOM05D001728 ORTHO05D004174 8.3e-18 94.4 218 35.8
Nn2g12682 Nelumbo nucifera HOM05D001728 ORTHO05D004174 8.3e-18 94.4 137 43.1
Lj6g0011500 Lotus japonicus HOM05D001728 ORTHO05D004174 1.1e-17 94.0 173 36.4
Potri.008G106300 Populus trichocarpa HOM05D001728 ORTHO05D004174 1.1e-17 94.0 223 33.2
vmacro15187 Vaccinium macrocarpon HOM05D001728 ORTHO05D004174 1.1e-17 94.0 208 35.1
Cfa015326 Carpinus fangiana HOM05D001728 ORTHO05D004174 1.4e-17 93.6 219 34.2
Lj4g0019830 Lotus japonicus HOM05D001728 ORTHO05D004174 1.4e-17 93.6 207 33.3
Glyma.17G032800 Glycine max HOM05D001728 ORTHO05D004174 1.9e-17 93.2 206 35.0
CSS0047464 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004174 2.4e-17 92.8 213 36.6
CANSAT78G2180 Cannabis sativa HOM05D001728 ORTHO05D004174 2.4e-17 92.8 226 33.6
Atru.chr4.3016 Acer truncatum HOM05D001728 ORTHO05D004174 3.2e-17 92.4 236 34.3
Manes.03G203400 Manihot esculenta HOM05D001728 ORTHO05D004174 3.2e-17 92.4 223 33.6
Nn3g19516 Nelumbo nucifera HOM05D001728 ORTHO05D004174 3.2e-17 92.4 146 39.0
Nitab4.5_0002150g0220 Nicotiana tabacum HOM05D001728 ORTHO05D004174 3.2e-17 92.4 215 33.5
TAR362G0220 Trochodendron aralioides HOM05D001728 ORTHO05D004174 3.2e-17 92.4 185 36.2
Actinidia13363 Actinidia chinensis HOM05D001728 ORTHO05D004174 4.1e-17 92.0 210 35.7
arahy.Tifrunner.gnm1.ann1.6P8AS9 Arachis hypogaea HOM05D001728 ORTHO05D004174 4.1e-17 92.0 207 33.8
Ca_21446_v3 Cicer arietinum L. HOM05D001728 ORTHO05D004174 4.1e-17 92.0 177 35.6
arahy.Tifrunner.gnm1.ann1.MYV2K5 Arachis hypogaea HOM05D001728 ORTHO05D004174 5.4e-17 91.7 207 33.8
Gohir.D09G235700 Gossypium hirsutum HOM05D001728 ORTHO05D004174 5.4e-17 91.7 164 38.4
Gorai.006G258700 Gossypium raimondii HOM05D001728 ORTHO05D004174 5.4e-17 91.7 164 38.4
Rhsim02G0004600 Rhododendron simsii HOM05D001728 ORTHO05D004174 5.4e-17 91.7 213 35.2
AUR62041394 Chenopodium quinoa HOM05D001728 ORTHO05D004174 7.1e-17 91.3 204 35.3
Duzib151G0474 Durio zibethinus HOM05D001728 ORTHO05D004174 7.1e-17 91.3 151 38.4
Gohir.A10G171400 Gossypium hirsutum HOM05D001728 ORTHO05D004174 7.1e-17 91.3 151 37.7
THA.LOC104820301 Tarenaya hassleriana HOM05D001728 ORTHO05D004174 7.1e-17 91.3 191 35.6
Cpa.g.sc9.71 Carica papaya HOM05D001728 ORTHO05D004174 9.2e-17 90.9 223 33.6
Dinv44292 Davidia involucrata HOM05D001728 ORTHO05D004174 9.2e-17 90.9 124 48.4
FvH4_4g19560 Fragaria vesca HOM05D001728 ORTHO05D004174 9.2e-17 90.9 219 33.3
FAN12G2115 Fragaria x ananassa HOM05D001728 ORTHO05D004174 9.2e-17 90.9 219 33.3
Manes.15G005200 Manihot esculenta HOM05D001728 ORTHO05D004174 9.2e-17 90.9 213 31.9
Oeu019973.1 Olea europaea HOM05D001728 ORTHO05D004174 9.2e-17 90.9 151 38.4
Potri.010G143900 Populus trichocarpa HOM05D001728 ORTHO05D004174 9.2e-17 90.9 215 34.4
MSTRG.24818 Avicennia marina HOM05D001728 ORTHO05D004174 1.2e-16 90.5 213 36.2
CiPaw.02G075700 Carya illinoinensis HOM05D001728 ORTHO05D004174 1.2e-16 90.5 232 32.3
Ciclev10005518m.g Citrus clementina HOM05D001728 ORTHO05D004174 1.2e-16 90.5 230 32.2
Peaxi162Scf00017g00816 Petunia axillaris HOM05D001728 ORTHO05D004174 1.2e-16 90.5 202 34.7
Psat4g024160 Pisum sativum HOM05D001728 ORTHO05D004174 1.2e-16 90.5 125 45.6
Sp7g14760 Schrenkiella parvula HOM05D001728 ORTHO05D004174 1.6e-16 90.1 175 36.6
Oeu046575.1 Olea europaea HOM05D001728 ORTHO05D004174 2.1e-16 89.7 180 36.1
CSS0014848 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004174 2.7e-16 89.4 213 36.2
Gohir.D10G178500 Gossypium hirsutum HOM05D001728 ORTHO05D004174 2.7e-16 89.4 173 37.0
Gorai.011G199600 Gossypium raimondii HOM05D001728 ORTHO05D004174 2.7e-16 89.4 173 37.0
Solyc12g099310.2 Solanum lycopersicum HOM05D001728 ORTHO05D004174 2.7e-16 89.4 225 32.4
TPR.G27262 Trifolium pratense HOM05D001728 ORTHO05D004174 2.7e-16 89.4 124 49.2
Nn2g11990 Nelumbo nucifera HOM05D001728 ORTHO05D004174 4.6e-16 88.6 169 36.1
Sopen12g033990 Solanum pennellii HOM05D001728 ORTHO05D004174 4.6e-16 88.6 212 34.0
ClCG05G006510 Citrullus lanatus HOM05D001728 ORTHO05D004174 6.0e-16 88.2 205 33.7
Dinv15187 Davidia involucrata HOM05D001728 ORTHO05D004174 6.0e-16 88.2 123 46.3
PSO761G0142 Papaver somniferum HOM05D001728 ORTHO05D004174 6.0e-16 88.2 229 33.2
VMungo1215G0747 Vigna mungo HOM05D001728 ORTHO05D004174 6.0e-16 88.2 227 33.0
QL06p011803 Quercus lobata HOM05D001728 ORTHO05D004174 7.8e-16 87.8 213 35.2
Aa31LG10G5870 Aethionema arabicum HOM05D001728 ORTHO05D004174 1.0e-15 87.4 214 34.1
AL3G29980 Arabidopsis lyrata HOM05D001728 ORTHO05D004174 1.0e-15 87.4 219 31.5
AL7G38800 Arabidopsis lyrata HOM05D001728 ORTHO05D004174 1.0e-15 87.4 170 34.1
AT3G17000 Arabidopsis thaliana HOM05D001728 ORTHO05D004174 1.0e-15 87.4 226 32.3
EL10Ac3g05476 Beta vulgaris HOM05D001728 ORTHO05D004174 1.0e-15 87.4 211 33.2
CAN.G484.58 Capsicum annuum HOM05D001728 ORTHO05D004174 1.0e-15 87.4 141 39.0
FAN07G1735 Fragaria x ananassa HOM05D001728 ORTHO05D004174 1.0e-15 87.4 128 46.1
Oeu003758.1 Olea europaea HOM05D001728 ORTHO05D004174 1.0e-15 87.4 151 36.4
Haze_01289 Corylus avellana HOM05D001728 ORTHO05D004174 1.3e-15 87.0 222 33.3
Thhalv10021196m.g Eutrema salsugineum HOM05D001728 ORTHO05D004174 1.3e-15 87.0 204 32.4
PSO210G3088 Papaver somniferum HOM05D001728 ORTHO05D004174 1.3e-15 87.0 206 32.0
Phvul.003G113800 Phaseolus vulgaris HOM05D001728 ORTHO05D004174 1.3e-15 87.0 198 34.8
Hund11964 Selenicereus undatus HOM05D001728 ORTHO05D004174 1.3e-15 87.0 151 36.4
CDE02G0105 Ceratophyllum demersum HOM05D001728 ORTHO05D004174 1.7e-15 86.7 227 33.0
Gohir.A09G234900 Gossypium hirsutum HOM05D001728 ORTHO05D004174 1.7e-15 86.7 151 37.7
MD13G1155700 Malus domestica HOM05D001728 ORTHO05D004174 1.7e-15 86.7 219 30.6
Sabra10G0111100 Salix brachista HOM05D001728 ORTHO05D004174 1.7e-15 86.7 219 33.3
Hund03118 Selenicereus undatus HOM05D001728 ORTHO05D004174 1.7e-15 86.7 227 32.2
arahy.Tifrunner.gnm1.ann1.C412JQ Arachis hypogaea HOM05D001728 ORTHO05D004174 2.3e-15 86.3 134 42.5
MSTRG.10147 Avicennia marina HOM05D001728 ORTHO05D004174 2.3e-15 86.3 208 32.7
Sabra08G0080000 Salix brachista HOM05D001728 ORTHO05D004174 2.3e-15 86.3 136 44.1
SGA_v2.0_scaffold18G08401 Striga asiatica HOM05D001728 ORTHO05D004174 2.3e-15 86.3 215 31.6
Thecc.04G299100 Theobroma cacao HOM05D001728 ORTHO05D004174 2.3e-15 86.3 210 33.3
PGSC0003DMG400004699 Solanum tuberosum HOM05D001728 ORTHO05D004174 3.0e-15 85.9 216 32.9
Ah.13g071940 Amaranthus hybridus HOM05D001728 ORTHO05D004174 3.9e-15 85.5 143 35.7
Lj3A830T25 Lonicera japonica HOM05D001728 ORTHO05D004174 5.1e-15 85.1 204 34.8
PGR031G3596 Punica granatum HOM05D001728 ORTHO05D004174 5.1e-15 85.1 124 47.6
TPR.G16843 Trifolium pratense HOM05D001728 ORTHO05D004174 5.1e-15 85.1 206 33.5
Aqoxy2G02747 Aquilegia oxysepala HOM05D001728 ORTHO05D004174 6.6e-15 84.7 206 33.0
BcaNung00213 Brassica carinata HOM05D001728 ORTHO05D004174 6.6e-15 84.7 181 32.6
Duzib052G1178 Durio zibethinus HOM05D001728 ORTHO05D004174 6.6e-15 84.7 224 32.1
Lalb_Chr15g0089241 Lupinus albus HOM05D001728 ORTHO05D004174 6.6e-15 84.7 151 35.8
CARHR092250 Cardamine hirsuta HOM05D001728 ORTHO05D004174 8.6e-15 84.3 211 32.2
Oeu032018.1 Olea europaea HOM05D001728 ORTHO05D004174 8.6e-15 84.3 206 32.5
C01p26690 Brassica napus HOM05D001728 ORTHO05D004174 1.1e-14 84.0 184 33.7
CDE08G1047 Ceratophyllum demersum HOM05D001728 ORTHO05D004174 1.1e-14 84.0 149 36.9
Cc03_g00930 Coffea canephora HOM05D001728 ORTHO05D004174 1.1e-14 84.0 214 32.2
SalBow5G2437 Salvia bowleyana HOM05D001728 ORTHO05D004174 1.1e-14 84.0 220 30.9
A01p37320 Brassica napus HOM05D001728 ORTHO05D004174 1.5e-14 83.6 175 33.1
BraA01t03790Z Brassica rapa HOM05D001728 ORTHO05D004174 1.5e-14 83.6 175 33.1
Mapoly0002s0227 Marchantia polymorpha HOM05D001728 ORTHO05D004174 1.5e-14 83.6 201 32.3
Sp3g15220 Schrenkiella parvula HOM05D001728 ORTHO05D004174 1.5e-14 83.6 226 31.9
Zm00001eb014740 Zea mays HOM05D001728 ORTHO05D004174 1.5e-14 83.6 168 36.3
Actinidia14261 Actinidia chinensis HOM05D001728 ORTHO05D004174 1.9e-14 83.2 187 36.9
ATR0796G190 Amborella trichopoda HOM05D001728 ORTHO05D004174 1.9e-14 83.2 207 32.4
Eucgr.A00356 Eucalyptus grandis HOM05D001728 ORTHO05D004174 1.9e-14 83.2 202 34.7
THA.LOC104818887 Tarenaya hassleriana HOM05D001728 ORTHO05D004174 2.5e-14 82.8 216 32.4
MSTRG.21773 Avicennia marina HOM05D001728 ORTHO05D004174 3.3e-14 82.4 210 34.8
Os03g0308000 Oryza sativa ssp. japonica HOM05D001728 ORTHO05D004174 3.3e-14 82.4 175 33.7
PGR004G2896 Punica granatum HOM05D001728 ORTHO05D004174 3.3e-14 82.4 231 33.8
Zm00001eb396060 Zea mays HOM05D001728 ORTHO05D004174 3.3e-14 82.4 154 36.4
BolC1t02610H Brassica oleracea HOM05D001728 ORTHO05D004174 4.3e-14 82.0 211 31.3
Dinv33122 Davidia involucrata HOM05D001728 ORTHO05D004174 5.6e-14 81.6 209 33.0
SalBow2G0520 Salvia bowleyana HOM05D001728 ORTHO05D004174 5.6e-14 81.6 208 31.2
Aa31LG8G4040 Aethionema arabicum HOM05D001728 ORTHO05D004174 7.3e-14 81.3 218 32.1
Glyma.07G240600 Glycine max HOM05D001728 ORTHO05D004174 7.3e-14 81.3 208 31.7
A01p21340 Brassica napus HOM05D001728 ORTHO05D004174 9.5e-14 80.9 211 31.8
BraA01t02040Z Brassica rapa HOM05D001728 ORTHO05D004174 9.5e-14 80.9 211 31.8
COL.COLO4_34632 Corchorus olitorius HOM05D001728 ORTHO05D004174 9.5e-14 80.9 218 32.6
Carub.0003s1675 Capsella rubella HOM05D001728 ORTHO05D004174 1.2e-13 80.5 213 31.0
Carub.0007s2527 Capsella rubella HOM05D001728 ORTHO05D004174 1.2e-13 80.5 188 31.9
Migut.G00049 Erythranthe guttata HOM05D001728 ORTHO05D004174 1.6e-13 80.1 188 34.0
TWI73G0756 Tripterygium wilfordii HOM05D001728 ORTHO05D004174 1.6e-13 80.1 220 30.0
BcaC09g50319 Brassica carinata HOM05D001728 ORTHO05D004174 2.1e-13 79.7 211 31.3
C01p47260 Brassica napus HOM05D001728 ORTHO05D004174 2.1e-13 79.7 226 31.9
Nn8g41281 Nelumbo nucifera HOM05D001728 ORTHO05D004174 2.1e-13 79.7 75 57.3
CARHR222630 Cardamine hirsuta HOM05D001728 ORTHO05D004174 3.6e-13 79.0 210 31.9
TWI53G1778 Tripterygium wilfordii HOM05D001728 ORTHO05D004174 3.6e-13 79.0 219 29.7
BolC1t04696H Brassica oleracea HOM05D001728 ORTHO05D004174 8.1e-13 77.8 226 31.4
BcaC09g48652 Brassica carinata HOM05D001728 ORTHO05D004174 1.1e-12 77.4 226 31.4
Thhalv10025677m.g Eutrema salsugineum HOM05D001728 ORTHO05D004174 1.1e-12 77.4 222 32.0
TWI09G0044 Tripterygium wilfordii HOM05D001728 ORTHO05D004174 1.1e-12 77.4 219 29.7
MD16G1155400 Malus domestica HOM05D001728 ORTHO05D004174 1.4e-12 77.0 219 28.8
Nn1g01603 Nelumbo nucifera HOM05D001728 ORTHO05D004174 1.8e-12 76.6 83 55.4
unitig_8.g3091 Utricularia gibba HOM05D001728 ORTHO05D004174 1.8e-12 76.6 183 31.1
Hma1.2p1_0078F.1_g039990 Hydrangea macrophylla HOM05D001728 ORTHO05D004174 4.0e-12 75.5 220 31.4
CBR_g19546 Chara braunii HOM05D001728 ORTHO05D004174 5.2e-12 75.1 127 41.7
Lalb_Chr18g0058741 Lupinus albus HOM05D001728 ORTHO05D004174 1.5e-11 73.6 202 31.2
Prupe.7G180600 Prunus persica HOM05D001728 ORTHO05D004174 1.5e-11 73.6 54 63.0
Sc19g0003160 Simmondsia chinensis HOM05D001728 ORTHO05D004174 1.5e-11 73.6 117 40.2
unitig_22.g6343 Utricularia gibba HOM05D001728 ORTHO05D004174 1.5e-11 73.6 200 30.5
AagrBONN_evm.TU.Sc2ySwM_228.2363 Anthoceros agrestis HOM05D001728 ORTHO05D004174 3.4e-11 72.4 104 45.2
Prupe.7G179700 Prunus persica HOM05D001728 ORTHO05D004174 5.8e-11 71.6 54 57.4
Prupe.1G119000 Prunus persica HOM05D001728 ORTHO05D004174 9.9e-11 70.9 219 26.9
Duzib212G0357 Durio zibethinus HOM05D001728 ORTHO05D004174 1.3e-10 70.5 132 35.6
Peaxi162Scf00228g00218 Petunia axillaris HOM05D001728 ORTHO05D004174 1.7e-10 70.1 154 37.0
Prupe.7G180200 Prunus persica HOM05D001728 ORTHO05D004174 4.9e-10 68.6 59 55.9
Pp3c7_24370 Physcomitrium patens HOM05D001728 ORTHO05D004174 8.4e-10 67.8 199 29.1
Prupe.5G033600 Prunus persica HOM05D001728 ORTHO05D004174 1.4e-09 67.0 52 61.5
HPP92_008952 Vanilla planifolia HOM05D001728 ORTHO05D004174 1.4e-09 67.0 203 31.0
Nn1g04497 Nelumbo nucifera HOM05D001728 ORTHO05D004174 2.4e-09 66.2 128 34.4
HanXRQChr11g0353501 Helianthus annuus HOM05D001728 ORTHO05D004174 4.1e-09 65.5 43 76.7
SMO116G0349 Selaginella moellendorffii HOM05D001728 ORTHO05D004174 1.6e-08 63.5 139 30.9
Prupe.6G047000 Prunus persica HOM05D001728 ORTHO05D004174 2.1e-08 63.2 63 50.8
vmacro02402 Vaccinium macrocarpon HOM05D001728 ORTHO05D004174 1.5e-06 57.0 130 30.0
arahy.Tifrunner.gnm1.ann1.JD5JQQ Arachis hypogaea HOM05D001728 ORTHO05D004174 1.9e-06 56.6 50 56.0
CARHR274020 Cardamine hirsuta HOM05D001728 ORTHO05D004174 2.5e-06 56.2 43 60.5


User provided reference genes

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