Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 2.6e-55 218.4 102 100.0
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.4e-40 169.5 87 88.5
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 3.0e-40 168.3 111 73.9
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 1.6e-36 156.0 84 79.8
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 3.5e-36 154.8 96 75.0
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 4.5e-36 154.5 100 72.0
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 5.9e-36 154.1 84 81.0
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 7.7e-36 153.7 101 67.3
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 7.7e-36 153.7 83 79.5
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 1.0e-35 153.3 88 76.1
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 1.0e-35 153.3 96 70.8
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 1.0e-35 153.3 84 78.6
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.3e-35 152.9 93 75.3
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 1.7e-35 152.5 102 67.6
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 2.2e-35 152.1 93 75.3
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 2.2e-35 152.1 79 82.3
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 2.9e-35 151.8 101 66.3
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 2.9e-35 151.8 80 85.0
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 5.0e-35 151.0 84 79.8
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 6.5e-35 150.6 88 73.9
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 6.5e-35 150.6 76 85.5
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 1.1e-34 149.8 88 73.9
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.5e-34 149.4 85 77.6
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 1.5e-34 149.4 88 73.9
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 3.2e-34 148.3 86 76.7
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 4.2e-34 147.9 84 77.4
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 5.5e-34 147.5 84 76.2
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 5.5e-34 147.5 80 78.8
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 7.2e-34 147.1 101 68.3
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 9.4e-34 146.7 87 75.9
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.6e-33 146.0 88 75.0
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 2.7e-33 145.2 80 78.8
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 3.6e-33 144.8 94 69.1
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 2.3e-32 142.1 88 71.6
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 2.3e-32 142.1 93 71.0
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 3.0e-32 141.7 85 68.2
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 3.0e-32 141.7 69 87.0
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 5.2e-32 141.0 86 73.3
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 1.2e-31 139.8 100 64.0
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.0e-31 139.0 68 85.3
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.0e-31 139.0 68 85.3
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 2.0e-31 139.0 68 85.3
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 3.4e-31 138.3 84 72.6
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.3e-30 136.3 92 68.5
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 4.8e-30 134.4 86 72.1
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 6.3e-30 134.0 67 83.6
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 6.3e-30 134.0 67 83.6
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 8.3e-30 133.7 93 62.4
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.1e-29 133.3 63 88.9
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.1e-29 133.3 63 88.9
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 9.1e-29 130.2 93 61.3
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 4.5e-28 127.9 81 72.8
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 1.3e-27 126.3 82 69.5
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 2.9e-27 125.2 106 54.7
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 1.9e-26 122.5 83 66.3
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 9.5e-26 120.2 85 64.7
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 2.8e-25 118.6 84 65.5
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 1.0e-24 116.7 87 64.4
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 8.9e-24 113.6 103 55.3
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 8.9e-24 113.6 83 62.7
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 2.8e-22 108.6 88 61.4
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 2.8e-22 108.6 76 64.5
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 3.7e-22 108.2 105 55.2
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 8.3e-22 107.1 52 82.7
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.4e-21 106.3 97 56.7
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 2.0e-20 102.4 97 54.6
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 1.7e-19 99.4 61 68.9
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 2.3e-19 99.0 45 93.3
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 1.1e-18 96.7 84 58.3
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 1.5e-18 96.3 46 91.3
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 2.5e-18 95.5 79 64.6
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 2.5e-18 95.5 85 55.3
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 9.5e-18 93.6 94 48.9
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 4.7e-17 91.3 83 56.6
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 8.0e-17 90.5 85 51.8
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 2.3e-16 89.0 79 58.2
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 6.8e-16 87.4 55 70.9
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.0e-15 85.9 55 69.1
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 5.8e-15 84.3 65 60.0
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 9.8e-15 83.6 63 60.3
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 2.3e-11 72.4 37 81.1
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 1.4e-08 63.2 30 86.7


User provided reference genes

Program Settings