Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 2.1e-55 218.8 112 100.0
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 5.1e-41 171.0 133 71.4
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 4.3e-40 167.9 135 70.4
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 1.1e-38 163.3 145 64.8
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 8.2e-31 137.1 111 68.5
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 2.3e-25 119.0 120 62.5
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 3.3e-24 115.2 129 54.3
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 7.4e-24 114.0 107 58.9
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 7.4e-24 114.0 117 55.6
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 2.2e-23 112.5 135 54.1
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 8.2e-23 110.5 119 56.3
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 8.2e-23 110.5 125 56.8
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 1.8e-22 109.4 125 57.6
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 2.0e-21 105.9 129 53.5
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 4.5e-21 104.8 123 54.5
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 1.3e-20 103.2 132 52.3
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 8.5e-20 100.5 123 52.8
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 3.2e-19 98.6 122 54.1
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 4.2e-19 98.2 125 51.2
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 4.2e-19 98.2 112 53.6
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 9.4e-19 97.1 125 51.2
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 9.4e-19 97.1 125 51.2
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 1.4e-17 93.2 108 53.7
DCAR_008279 Daucus carota HOM05D007324 ORTHO05D007884 4.0e-17 91.7 115 50.4
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 5.2e-17 91.3 117 48.7
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 5.2e-17 91.3 102 52.0
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 6.7e-17 90.9 121 50.4
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 8.8e-17 90.5 125 48.8
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 1.7e-15 86.3 114 49.1
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 3.7e-15 85.1 86 62.8
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 3.7e-15 85.1 86 62.8
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 6.3e-15 84.3 116 50.9
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 8.2e-15 84.0 113 52.2
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 2.4e-14 82.4 108 51.9
DCAR_005623 Daucus carota HOM05D007324 ORTHO05D007884 4.1e-14 81.6 117 43.6
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 4.1e-14 81.6 95 56.8
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 5.3e-14 81.3 115 47.8
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 5.3e-14 81.3 115 46.1
Peaxi162Scf00460g00044 Petunia axillaris HOM05D007324 ORTHO05D007884 5.3e-14 81.3 112 50.0
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 7.0e-14 80.9 115 46.1
Hma1.2p1_0585F.1_g183650 Hydrangea macrophylla HOM05D007324 ORTHO05D007884 2.7e-13 79.0 86 57.0
Actinidia09218 Actinidia chinensis HOM05D007324 ORTHO05D007884 4.5e-13 78.2 111 46.8
CSS0050429 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 4.5e-13 78.2 108 44.4
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 1.7e-12 76.3 93 55.9
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 2.2e-12 75.9 93 55.9
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 3.8e-12 75.1 134 44.0
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 5.0e-12 74.7 118 45.8
Ca_22071_v3 Cicer arietinum L. HOM05D007324 ORTHO05D007884 1.1e-11 73.6 104 49.0
Dinv28942 Davidia involucrata HOM05D007324 ORTHO05D007884 1.5e-11 73.2 112 45.5
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 1.9e-11 72.8 94 54.3
TPR.G29033 Trifolium pratense HOM05D007324 ORTHO05D007884 2.5e-11 72.4 116 44.8
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 3.2e-11 72.0 97 50.5
CANSAT21G2393 Cannabis sativa HOM05D007324 ORTHO05D007884 3.2e-11 72.0 134 38.8
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 3.2e-11 72.0 119 44.5
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 4.2e-11 71.6 110 45.5
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 7.2e-11 70.9 82 51.2
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 7.2e-11 70.9 111 45.9
vmacro22242 Vaccinium macrocarpon HOM05D007324 ORTHO05D007884 9.4e-11 70.5 77 59.7
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 2.7e-10 68.9 117 47.0
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 3.6e-10 68.6 74 56.8
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 6.1e-10 67.8 85 50.6
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 1.0e-09 67.0 99 47.5
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 1.0e-09 67.0 99 47.5
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 1.4e-09 66.6 116 44.0
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 2.3e-09 65.9 112 44.6
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 3.0e-09 65.5 117 45.3
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 3.0e-09 65.5 117 45.3
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 3.0e-09 65.5 93 47.3
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 4.0e-09 65.1 117 46.2
Peaxi162Scf00615g00021 Petunia axillaris HOM05D007324 ORTHO05D007884 4.0e-09 65.1 124 40.3
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 5.2e-09 64.7 103 43.7
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 8.8e-09 63.9 104 47.1
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 2.6e-08 62.4 132 39.4
Potri.001G143700 Populus trichocarpa HOM05D007324 ORTHO05D007884 2.8e-07 58.9 123 37.4
SalBow1G4617 Salvia bowleyana HOM05D007324 ORTHO05D007884 3.7e-07 58.5 119 36.1
SalBow8G4924 Salvia bowleyana HOM05D007324 ORTHO05D007884 3.7e-07 58.5 119 36.1
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 6.3e-07 57.8 121 38.8
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 8.3e-07 57.4 147 34.7
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 8.3e-07 57.4 88 45.5
ClCG10G001740 Citrullus lanatus HOM05D007324 ORTHO05D007884 1.1e-06 57.0 123 37.4
Nitab4.5_0008428g0010 Nicotiana tabacum HOM05D007324 ORTHO05D007884 1.1e-06 57.0 125 37.6
Prupe.5G039400 Prunus persica HOM05D007324 ORTHO05D007884 4.1e-06 55.1 52 65.4
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 7.0e-06 54.3 118 37.3


User provided reference genes

Program Settings