Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 5.7e-170 600.9 316 100.0
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 1.4e-128 463.4 311 78.8
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 3.3e-125 452.2 339 74.0
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 1.8e-115 419.9 320 70.9
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 2.7e-111 406.0 320 68.8
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 3.0e-110 402.5 320 68.4
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 7.3e-109 397.9 320 65.3
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 1.2e-108 397.1 320 65.3
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 1.8e-107 393.3 320 64.4
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 7.5e-106 387.9 321 66.7
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 1.3e-105 387.1 321 66.7
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 1.1e-104 384.0 322 66.1
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 1.1e-104 384.0 318 65.4
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 2.4e-104 382.9 320 65.6
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 2.4e-104 382.9 326 66.3
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 3.2e-104 382.5 321 66.0
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 7.1e-104 381.3 321 65.7
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 3.5e-103 379.0 322 64.9
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 1.3e-102 377.1 314 65.9
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 1.7e-102 376.7 314 65.3
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 2.3e-102 376.3 327 62.7
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 6.6e-102 374.8 321 65.1
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 8.6e-102 374.4 316 64.2
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 1.1e-101 374.0 316 66.8
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 3.3e-101 372.5 314 67.2
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 5.6e-101 371.7 321 63.6
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 5.6e-101 371.7 322 63.4
Nitab4.5_0008211g0030 Nicotiana tabacum HOM05D005174 ORTHO05D006784 5.6e-101 371.7 333 61.3
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 7.3e-101 371.3 322 64.0
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 9.5e-101 370.9 315 66.3
QL09p035644 Quercus lobata HOM05D005174 ORTHO05D006784 1.2e-100 370.5 310 66.1
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 1.6e-100 370.2 322 64.6
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 2.8e-100 369.4 321 63.6
TWI56G0960 Tripterygium wilfordii HOM05D005174 ORTHO05D006784 4.7e-100 368.6 313 63.9
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 2.3e-99 366.3 322 64.0
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 4.0e-99 365.5 320 62.8
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 8.9e-99 364.4 334 61.4
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 8.9e-99 364.4 321 62.6
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 8.9e-99 364.4 321 63.2
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 1.2e-98 364.0 322 63.7
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 4.4e-98 362.1 361 58.7
Ciclev10001813m.g Citrus clementina HOM05D005174 ORTHO05D006784 9.9e-98 360.9 318 63.8
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.3e-97 360.5 321 62.9
Medtr3g072620 Medicago truncatula HOM05D005174 ORTHO05D006784 1.7e-97 360.1 320 62.8
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 2.9e-97 359.4 328 61.9
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 3.7e-97 359.0 323 62.2
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 1.1e-96 357.5 313 62.0
CiPaw.05G223800 Carya illinoinensis HOM05D005174 ORTHO05D006784 3.2e-96 355.9 306 63.7
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 4.1e-96 355.5 318 61.6
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 5.4e-96 355.1 303 64.4
SGA_v2.0_scaffold52G18977 Striga asiatica HOM05D005174 ORTHO05D006784 3.5e-95 352.4 321 61.4
Cfa015995 Carpinus fangiana HOM05D005174 ORTHO05D006784 7.8e-95 351.3 312 64.1
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.3e-94 350.5 322 59.6
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 3.9e-94 349.0 321 60.7
vmacro00818 Vaccinium macrocarpon HOM05D005174 ORTHO05D006784 1.1e-93 347.4 302 66.2
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 2.5e-93 346.3 312 60.6
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 4.3e-93 345.5 369 56.9
PSO782G4297 Papaver somniferum HOM05D005174 ORTHO05D006784 4.3e-93 345.5 322 59.6
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 5.6e-93 345.1 372 54.3
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 7.3e-93 344.7 321 63.6
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 1.6e-92 343.6 324 61.1
Aqoxy6G00176 Aquilegia oxysepala HOM05D005174 ORTHO05D006784 2.1e-92 343.2 313 59.4
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 4.7e-92 342.0 310 60.0
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 4.7e-92 342.0 310 60.0
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 5.2e-91 338.6 320 59.4
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 1.2e-90 337.4 316 58.9
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 4.4e-90 335.5 313 59.1
PSO170G4538 Papaver somniferum HOM05D005174 ORTHO05D006784 5.8e-90 335.1 322 57.8
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 7.6e-90 334.7 308 59.1
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 9.9e-90 334.3 316 57.3
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 9.9e-90 334.3 316 57.3
Peaxi162Scf00051g00623 Petunia axillaris HOM05D005174 ORTHO05D006784 1.7e-89 333.6 320 58.8
Aa31LG6G9210 Aethionema arabicum HOM05D005174 ORTHO05D006784 1.4e-88 330.5 310 58.1
RhsimUnG0094500 Rhododendron simsii HOM05D005174 ORTHO05D006784 1.9e-88 330.1 327 60.2
ATR0193G024 Amborella trichopoda HOM05D005174 ORTHO05D006784 5.4e-88 328.6 317 57.4
AUR62042433 Chenopodium quinoa HOM05D005174 ORTHO05D006784 5.4e-88 328.6 316 57.0
Atru.chr13.1416 Acer truncatum HOM05D005174 ORTHO05D006784 2.1e-87 326.6 298 61.7
Nitab4.5_0000633g0140 Nicotiana tabacum HOM05D005174 ORTHO05D006784 1.0e-86 324.3 318 56.6
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 3.0e-86 322.8 322 56.8
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 8.7e-86 321.2 321 57.6
AUR62018164 Chenopodium quinoa HOM05D005174 ORTHO05D006784 1.9e-85 320.1 332 53.3
CDE05G2191 Ceratophyllum demersum HOM05D005174 ORTHO05D006784 2.1e-84 316.6 316 52.8
AT1G44835 Arabidopsis thaliana HOM05D005174 ORTHO05D006784 3.6e-84 315.8 320 56.6
FAN20G1758 Fragaria x ananassa HOM05D005174 ORTHO05D006784 4.8e-84 315.5 314 56.4
CAN.G1396.5 Capsicum annuum HOM05D005174 ORTHO05D006784 6.2e-84 315.1 264 62.9
Sp1g33700 Schrenkiella parvula HOM05D005174 ORTHO05D006784 1.1e-83 314.3 316 55.4
BcaB04g17581 Brassica carinata HOM05D005174 ORTHO05D006784 4.0e-83 312.4 318 55.7
BcaC08g42881 Brassica carinata HOM05D005174 ORTHO05D006784 4.0e-83 312.4 319 55.2
C06p00970 Brassica napus HOM05D005174 ORTHO05D006784 2.0e-82 310.1 322 55.0
BraA08t32633Z Brassica rapa HOM05D005174 ORTHO05D006784 3.4e-82 309.3 318 55.3
A08p06300 Brassica napus HOM05D005174 ORTHO05D006784 4.4e-82 308.9 318 55.0
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 4.4e-82 308.9 375 50.7
BolC6t35233H Brassica oleracea HOM05D005174 ORTHO05D006784 5.8e-82 308.5 322 55.3
BcaC07g37283 Brassica carinata HOM05D005174 ORTHO05D006784 9.9e-82 307.8 318 54.7
A10p07300 Brassica napus HOM05D005174 ORTHO05D006784 9.9e-82 307.8 320 54.7
C08p07120 Brassica napus HOM05D005174 ORTHO05D006784 9.9e-82 307.8 318 54.7
BolC8t47557H Brassica oleracea HOM05D005174 ORTHO05D006784 9.9e-82 307.8 318 54.7
BraSC36t46091Z Brassica rapa HOM05D005174 ORTHO05D006784 9.9e-82 307.8 320 54.7
Thhalv10021201m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 1.7e-81 307.0 319 54.9
Thhalv10004660m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 3.8e-81 305.8 319 54.5
EL10Ac2g03105 Beta vulgaris HOM05D005174 ORTHO05D006784 6.4e-81 305.1 306 55.2
CARHR036100 Cardamine hirsuta HOM05D005174 ORTHO05D006784 4.2e-80 302.4 310 55.2
Os02g0767700 Oryza sativa ssp. japonica HOM05D005174 ORTHO05D006784 9.6e-77 291.2 310 52.3
DCAR_017401 Daucus carota HOM05D005174 ORTHO05D006784 1.5e-74 283.9 207 71.5
Sc01g0001280 Simmondsia chinensis HOM05D005174 ORTHO05D006784 1.5e-74 283.9 266 58.3
Zm00001eb193560 Zea mays HOM05D005174 ORTHO05D006784 2.6e-74 283.1 316 51.3
MBI03_g33021_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 7.6e-74 281.6 297 53.9
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 5.4e-72 275.4 306 53.6
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 3.0e-70 269.6 296 53.7
FAN15G0922 Fragaria x ananassa HOM05D005174 ORTHO05D006784 9.0e-67 258.1 348 48.3
FAN27G1282 Fragaria x ananassa HOM05D005174 ORTHO05D006784 7.6e-66 255.0 311 48.6
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.3e-62 244.2 318 49.1
SEGI_02373 Sequoiadendron giganteum HOM05D005174 ORTHO05D006784 8.7e-62 241.5 270 49.6
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 3.3e-61 239.6 316 48.7
Mapoly0010s0001 Marchantia polymorpha HOM05D005174 ORTHO05D006784 2.1e-60 236.9 311 45.7
Pp3c18_22250 Physcomitrium patens HOM05D005174 ORTHO05D006784 7.6e-58 228.4 302 45.4
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 1.4e-51 207.6 178 64.0
HPP92_001042 Vanilla planifolia HOM05D005174 ORTHO05D006784 1.3e-44 184.5 321 38.6
Cre10.g425950 Chlamydomonas reinhardtii HOM05D005174 ORTHO05D006784 2.6e-42 176.8 329 37.1
Haze_00470 Corylus avellana HOM05D005174 ORTHO05D006784 4.2e-40 169.5 119 76.5
PRCOL_00005180 Prasinoderma coloniale HOM05D005174 ORTHO05D006784 1.5e-37 161.0 189 46.0
MD08G1166300 Malus domestica HOM05D005174 ORTHO05D006784 1.3e-33 147.9 110 70.0
FAN20G0512 Fragaria x ananassa HOM05D005174 ORTHO05D006784 8.5e-33 145.2 267 39.7
Hund16845 Selenicereus undatus HOM05D005174 ORTHO05D006784 9.4e-32 141.7 105 68.6
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 7.4e-29 132.1 131 58.8
Haze_00471 Corylus avellana HOM05D005174 ORTHO05D006784 3.1e-27 126.7 183 46.4
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 7.7e-26 122.1 144 50.0
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 1.3e-20 104.8 98 59.2
Ca_03754_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 4.8e-20 102.8 102 55.9
Ca_03755_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 3.5e-18 96.7 85 61.2
Sabra02G0067100 Salix brachista HOM05D005174 ORTHO05D006784 4.0e-14 83.2 79 57.0
CiPaw.05G223900 Carya illinoinensis HOM05D005174 ORTHO05D006784 5.2e-14 82.8 81 54.3
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea HOM05D005174 ORTHO05D015215 8.8e-14 82.0 46 87.0
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea HOM05D005174 ORTHO05D015215 8.8e-14 82.0 46 87.0
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea HOM05D005174 ORTHO05D015215 8.8e-14 82.0 46 87.0
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea HOM05D005174 ORTHO05D015215 5.7e-13 79.3 67 61.2
Duzib041G0272 Durio zibethinus HOM05D005174 ORTHO05D015215 5.7e-13 79.3 54 74.1
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea HOM05D005174 ORTHO05D015215 1.3e-12 78.2 45 84.4
Cfa010764 Carpinus fangiana HOM05D005174 ORTHO05D006784 4.5e-10 69.7 81 48.1
MBI04_g30787_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 1.0e-09 68.6 91 42.9
SEGI_30371 Sequoiadendron giganteum HOM05D005174 ORTHO05D050453 1.1e-08 65.1 53 58.5
Potri.002G085700 Populus trichocarpa HOM05D005174 ORTHO05D050453 9.5e-08 62.0 54 61.1
SGA_v2.0_scaffold24G10473 Striga asiatica HOM05D021410 ORTHO05D401290 1.6e-07 61.2 36 77.8
Oeu059427.1 Olea europaea HOM05D005174 ORTHO05D006784 2.8e-07 60.5 52 55.8
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea HOM05D005174 ORTHO05D015215 6.1e-07 59.3 46 67.4
FAN24G2292 Fragaria x ananassa HOM05D005174 ORTHO05D006784 3.0e-06 57.0 56 50.0


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