Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0039651 Helianthus annuus HOM05D007503 ORTHO05D009487 6.8e-34 146.7 74 100.0
ECA232G1405 Erigeron canadensis HOM05D007503 ORTHO05D009487 4.4e-25 117.5 78 75.6
Dinv06977 Davidia involucrata HOM05D007503 ORTHO05D009487 5.8e-25 117.1 68 80.9
Actinidia06811 Actinidia chinensis HOM05D007503 ORTHO05D009487 2.4e-23 111.7 71 78.9
Rhsim01G0105600 Rhododendron simsii HOM05D007503 ORTHO05D009487 4.2e-23 110.9 71 77.5
vmacro20740 Vaccinium macrocarpon HOM05D007503 ORTHO05D009487 4.2e-23 110.9 71 80.3
Hma1.2p1_0123F.1_g057900 Hydrangea macrophylla HOM05D007503 ORTHO05D009487 5.4e-23 110.5 64 81.2
FvH4_1g27230 Fragaria vesca HOM05D007503 ORTHO05D009487 1.2e-22 109.4 71 77.5
FAN19G2707 Fragaria x ananassa HOM05D007503 ORTHO05D009487 1.2e-22 109.4 71 77.5
FAN23G0073 Fragaria x ananassa HOM05D007503 ORTHO05D009487 1.2e-22 109.4 71 77.5
FAN26G0784 Fragaria x ananassa HOM05D000757 ORTHO05D000622 1.2e-22 109.4 69 81.2
Cc09_g03530 Coffea canephora HOM05D007503 ORTHO05D009487 1.0e-21 106.3 74 75.7
GSVIVG01010020001 Vitis vinifera HOM05D007503 ORTHO05D009487 1.3e-21 105.9 68 77.9
RcHm_v2.0_Chr3g0487701 Rosa chinensis HOM05D007503 ORTHO05D009487 1.7e-21 105.5 71 77.5
TWI56G0335 Tripterygium wilfordii HOM05D007503 ORTHO05D009487 1.7e-21 105.5 77 67.5
PSO729G0165 Papaver somniferum HOM05D007503 ORTHO05D009487 3.9e-21 104.4 69 76.8
MD17G1272500 Malus domestica HOM05D007503 ORTHO05D009487 6.6e-21 103.6 71 77.5
DCAR_007994 Daucus carota HOM05D007503 ORTHO05D009487 1.5e-20 102.4 71 70.4
SalBow6G4878 Salvia bowleyana HOM05D007503 ORTHO05D009487 1.5e-20 102.4 71 74.6
THA.LOC104815587 Tarenaya hassleriana HOM05D007503 ORTHO05D009487 1.5e-20 102.4 73 71.2
DCAR_023852 Daucus carota HOM05D007503 ORTHO05D009487 1.9e-20 102.1 73 69.9
THA.LOC104822606 Tarenaya hassleriana HOM05D007503 ORTHO05D009487 1.9e-20 102.1 73 71.2
Nitab4.5_0002233g0020 Nicotiana tabacum HOM05D007503 ORTHO05D009487 3.3e-20 101.3 74 71.6
Nitab4.5_0001653g0060 Nicotiana tabacum HOM05D007503 ORTHO05D009487 5.6e-20 100.5 63 76.2
Manes.01G240301 Manihot esculenta HOM05D007503 ORTHO05D009487 7.3e-20 100.1 68 72.1
Nitab4.5_0011656g0020 Nicotiana tabacum HOM05D007503 ORTHO05D009487 1.3e-19 99.4 63 73.0
QL02p056384 Quercus lobata HOM05D007503 ORTHO05D009487 1.3e-19 99.4 73 68.5
Haze_14049 Corylus avellana HOM05D007503 ORTHO05D009487 2.1e-19 98.6 62 79.0
Haze_14060 Corylus avellana HOM05D007503 ORTHO05D009487 2.1e-19 98.6 62 79.0
Prupe.3G011500 Prunus persica HOM05D007503 ORTHO05D009487 2.1e-19 98.6 71 71.8
Solyc03g058340.3 Solanum lycopersicum HOM05D007503 ORTHO05D009487 2.1e-19 98.6 74 70.3
Sopen03g015570 Solanum pennellii HOM05D007503 ORTHO05D009487 2.1e-19 98.6 74 70.3
CAN.G326.18 Capsicum annuum HOM05D007503 ORTHO05D009487 3.6e-19 97.8 74 70.3
Gohir.A11G170200 Gossypium hirsutum HOM05D007503 ORTHO05D009487 3.6e-19 97.8 74 70.3
Gohir.D11G177200 Gossypium hirsutum HOM05D007503 ORTHO05D009487 3.6e-19 97.8 74 70.3
Gorai.007G189300 Gossypium raimondii HOM05D007503 ORTHO05D009487 3.6e-19 97.8 74 70.3
CiPaw.03G009100 Carya illinoinensis HOM05D007503 ORTHO05D009487 4.8e-19 97.4 61 78.7
MD09G1282700 Malus domestica HOM05D007503 ORTHO05D009487 8.1e-19 96.7 71 73.2
unitig_0.g938 Utricularia gibba HOM05D001953 ORTHO05D001904 8.1e-19 96.7 73 65.8
Migut.F01879 Erythranthe guttata HOM05D007503 ORTHO05D009487 1.1e-18 96.3 56 80.4
Nn1g09784 Nelumbo nucifera HOM05D007503 ORTHO05D009487 1.4e-18 95.9 64 75.0
Hund06856 Selenicereus undatus HOM05D007503 ORTHO05D009487 1.4e-18 95.9 71 69.0
Ciclev10013261m.g Citrus clementina HOM05D007503 ORTHO05D009487 2.4e-18 95.1 69 72.5
Peaxi162Scf00253g00725 Petunia axillaris HOM05D007503 ORTHO05D009487 2.4e-18 95.1 71 69.0
A01p39280 Brassica napus HOM05D007503 ORTHO05D009487 4.0e-18 94.4 73 65.8
BraA01t03971Z Brassica rapa HOM05D007503 ORTHO05D009487 4.0e-18 94.4 73 65.8
Sc09g0004610 Simmondsia chinensis HOM05D007503 ORTHO05D009487 4.0e-18 94.4 66 68.2
Thecc.09G340100 Theobroma cacao HOM05D007503 ORTHO05D009487 4.0e-18 94.4 74 68.9
AT3G14430 Arabidopsis thaliana HOM05D007503 ORTHO05D009487 5.3e-18 94.0 73 65.8
BcaC09g48410 Brassica carinata HOM05D007503 ORTHO05D009487 5.3e-18 94.0 73 64.4
BcaB06g25385 Brassica carinata HOM05D007503 ORTHO05D009487 6.9e-18 93.6 73 65.8
C01p50080 Brassica napus HOM05D007503 ORTHO05D009487 6.9e-18 93.6 73 64.4
BolC1t04962H Brassica oleracea HOM05D007503 ORTHO05D009487 6.9e-18 93.6 73 64.4
BolC5t33967H Brassica oleracea HOM05D007503 ORTHO05D009487 6.9e-18 93.6 73 65.8
Lalb_Chr20g0117211 Lupinus albus HOM05D007503 ORTHO05D009487 6.9e-18 93.6 71 67.6
BcaC05g29084 Brassica carinata HOM05D007503 ORTHO05D009487 9.0e-18 93.2 73 65.8
C05p52900 Brassica napus HOM05D007503 ORTHO05D009487 9.0e-18 93.2 73 65.8
A05p34950 Brassica napus HOM05D007503 ORTHO05D009487 1.2e-17 92.8 73 65.8
BraA05t22309Z Brassica rapa HOM05D007503 ORTHO05D009487 1.2e-17 92.8 73 65.8
Glyma.18G047300 Glycine max HOM05D007503 ORTHO05D009487 1.2e-17 92.8 71 64.8
Lj6g0027028 Lotus japonicus HOM05D007503 ORTHO05D009487 1.2e-17 92.8 71 66.2
Carub.0003s1415 Capsella rubella HOM05D007503 ORTHO05D009487 1.5e-17 92.4 73 63.0
Glyma.11G203700 Glycine max HOM05D007503 ORTHO05D009487 1.5e-17 92.4 71 64.8
CARHR089340 Cardamine hirsuta HOM05D007503 ORTHO05D009487 2.6e-17 91.7 68 64.7
AL3G26810 Arabidopsis lyrata HOM05D007503 ORTHO05D009487 3.4e-17 91.3 73 65.8
Duzib211G0566 Durio zibethinus HOM05D007503 ORTHO05D009487 3.4e-17 91.3 74 66.2
Eucgr.I00239 Eucalyptus grandis HOM05D007503 ORTHO05D009487 3.4e-17 91.3 70 70.0
Medtr3g063970 Medicago truncatula HOM05D007503 ORTHO05D009487 3.4e-17 91.3 68 70.6
Phvul.006G084000 Phaseolus vulgaris HOM05D007503 ORTHO05D009487 3.4e-17 91.3 66 69.7
Sp3g12730 Schrenkiella parvula HOM05D007503 ORTHO05D009487 3.4e-17 91.3 73 63.0
CANSAT80G2883 Cannabis sativa HOM05D007503 ORTHO05D009487 4.5e-17 90.9 71 66.2
COL.COLO4_13441 Corchorus olitorius HOM05D007503 ORTHO05D009487 7.6e-17 90.1 74 64.9
HanXRQChr14g0445891 Helianthus annuus HOM05D007503 ORTHO05D009487 9.9e-17 89.7 51 96.1
PGR119G1426 Punica granatum HOM05D007503 ORTHO05D009487 9.9e-17 89.7 64 75.0
Aqoxy5G03063 Aquilegia oxysepala HOM05D007503 ORTHO05D009487 1.7e-16 89.0 66 71.2
Thhalv10021919m.g Eutrema salsugineum HOM05D007503 ORTHO05D009487 1.7e-16 89.0 73 63.0
Lsat_1_v5_gn_9_48861 Lactuca sativa HOM05D007503 ORTHO05D009487 2.9e-16 88.2 53 86.8
Potri.014G105250 Populus trichocarpa HOM05D007503 ORTHO05D009487 2.9e-16 88.2 64 68.8
CDE05G2177 Ceratophyllum demersum HOM05D007503 ORTHO05D009487 4.9e-16 87.4 58 74.1
Zm00001eb175060 Zea mays HOM05D007503 ORTHO05D009487 4.9e-16 87.4 67 62.7
MELO3C025073.2 Cucumis melo HOM05D007503 ORTHO05D009487 2.4e-15 85.1 71 62.0
Aa31LG8G1690 Aethionema arabicum HOM05D007503 ORTHO05D009487 3.2e-15 84.7 73 57.5
ClCG01G008330 Citrullus lanatus HOM05D007503 ORTHO05D009487 3.2e-15 84.7 71 63.4
Zm00001eb036330 Zea mays HOM05D007503 ORTHO05D009487 3.2e-15 84.7 66 62.1
Os08g0528601 Oryza sativa ssp. japonica HOM05D007503 ORTHO05D009487 5.4e-15 84.0 71 60.6
Sed0018329 Sechium edule HOM05D007503 ORTHO05D009487 9.3e-15 83.2 68 60.3
CsaV3_5G020250 Cucumis sativus L. HOM05D007503 ORTHO05D009487 1.2e-14 82.8 71 60.6
Sabra14G0077600 Salix brachista HOM05D007503 ORTHO05D009487 3.5e-14 81.3 68 64.7
Pp3c11_25150 Physcomitrium patens HOM05D007503 ORTHO05D009487 6.0e-14 80.5 56 71.4
Sabra02G0134700 Salix brachista HOM05D007503 ORTHO05D009487 1.0e-13 79.7 69 55.1
Cpa.g.c46349 Carica papaya HOM05D007503 ORTHO05D009487 1.9e-12 75.5 73 56.2
Cpa.g.sc44.91 Carica papaya HOM05D007503 ORTHO05D009487 1.9e-12 75.5 73 56.2
Pp3c7_7140 Physcomitrium patens HOM05D007503 ORTHO05D009487 3.7e-11 71.2 56 64.3
Aa31LG10G1620 Aethionema arabicum HOM05D007503 ORTHO05D009487 6.2e-11 70.5 72 51.4
PGSC0003DMG400000976 Solanum tuberosum HOM05D007503 ORTHO05D009487 7.6e-09 63.5 54 66.7
CSS0042421 Camellia sinensis var. sinensis HOM05D007503 ORTHO05D009487 1.3e-08 62.8 51 68.6
TAR392G0002 Trochodendron aralioides HOM05D007503 ORTHO05D009487 1.4e-07 59.3 51 70.6
Mapoly0109s0063 Marchantia polymorpha HOM05D007503 ORTHO05D009487 1.9e-07 58.9 40 75.0
BcaC02g09481 Brassica carinata HOM05D007503 ORTHO05D009487 5.5e-07 57.4 43 65.1
arahy.Tifrunner.gnm1.ann1.CKCH2H Arachis hypogaea HOM05D007503 ORTHO05D009487 2.1e-06 55.5 39 69.2
arahy.Tifrunner.gnm1.ann1.17W1X2 Arachis hypogaea HOM05D007503 ORTHO05D009487 3.5e-06 54.7 51 60.8


User provided reference genes

Program Settings