Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 2.3e-32 141.7 78 100.0
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 5.0e-27 124.0 78 87.2
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 9.4e-26 119.8 78 84.6
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 9.1e-21 103.2 78 74.4
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 1.2e-20 102.8 78 76.9
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 2.3e-19 98.6 78 71.8
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 2.9e-19 98.2 78 70.5
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 3.8e-19 97.8 78 71.8
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 3.8e-19 97.8 78 71.8
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 3.8e-19 97.8 78 71.8
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 3.8e-19 97.8 77 74.0
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 3.8e-19 97.8 77 72.7
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 6.6e-19 97.1 78 69.2
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 8.6e-19 96.7 78 70.5
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 1.1e-18 96.3 78 70.5
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 1.1e-18 96.3 76 73.7
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 1.5e-18 95.9 78 71.8
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 2.5e-18 95.1 73 76.7
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 2.5e-18 95.1 78 71.8
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 4.2e-18 94.4 73 74.0
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 5.5e-18 94.0 79 69.6
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 5.5e-18 94.0 79 69.6
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 9.5e-18 93.2 76 69.7
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 1.6e-17 92.4 76 68.4
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 2.1e-17 92.0 76 69.7
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 8.0e-17 90.1 73 71.2
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 8.0e-17 90.1 78 69.2
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 1.4e-16 89.4 76 65.8
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 3.0e-16 88.2 76 68.4
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 3.0e-16 88.2 76 68.4
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 4.0e-16 87.8 73 68.5
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 5.2e-16 87.4 76 68.4
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 6.8e-16 87.0 78 66.7
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 6.8e-16 87.0 76 68.4
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 8.9e-16 86.7 76 67.1
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 1.2e-15 86.3 76 67.1
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 2.6e-15 85.1 92 58.7
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 4.4e-15 84.3 76 67.1
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 4.4e-15 84.3 76 67.1
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 5.7e-15 84.0 77 64.9
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 7.5e-15 83.6 76 61.8
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 9.8e-15 83.2 76 65.8
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 1.3e-14 82.8 76 65.8
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 2.2e-14 82.0 76 61.8
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 1.1e-13 79.7 68 70.6
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 2.4e-13 78.6 76 59.2
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 2.4e-13 78.6 68 69.1
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 3.2e-13 78.2 77 63.6
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 3.2e-13 78.2 52 84.6
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 5.4e-13 77.4 78 61.5
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 7.0e-13 77.0 77 64.9
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 7.0e-13 77.0 92 52.2
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 1.2e-12 76.3 73 65.8
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 1.6e-12 75.9 76 57.9
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 1.6e-12 75.9 73 64.4
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 2.7e-12 75.1 73 60.3
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 2.7e-12 75.1 73 60.3
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 5.9e-12 73.9 73 60.3
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 5.9e-12 73.9 73 60.3
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 5.9e-12 73.9 76 59.2
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 7.8e-12 73.6 78 60.3
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 7.8e-12 73.6 71 63.4
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 1.0e-11 73.2 91 54.9
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 1.3e-11 72.8 71 64.8
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 1.3e-11 72.8 89 53.9
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 2.9e-11 71.6 71 63.4
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 2.9e-11 71.6 76 56.6
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 5.0e-11 70.9 63 68.3
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 6.6e-11 70.5 81 59.3
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 4.3e-10 67.8 52 75.0
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 2.1e-09 65.5 102 46.1
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 2.8e-09 65.1 78 55.1
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 4.7e-09 64.3 80 55.0
HanXRQChr09g0266791 Helianthus annuus HOM05D007769 ORTHO05D009588 6.2e-09 63.9 41 82.9
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 8.0e-09 63.5 79 55.7
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 2.3e-08 62.0 76 53.9
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 5.2e-08 60.8 92 50.0
GSVIVG01009342001 Vitis vinifera HOM05D007769 ORTHO05D009588 8.9e-08 60.1 78 51.3
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 2.6e-07 58.5 73 54.8
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 3.4e-07 58.2 73 53.4
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 3.7e-06 54.7 79 46.8
Peaxi162Scf00003g01523 Petunia axillaris HOM05D007769 ORTHO05D009588 8.3e-06 53.5 39 74.4


User provided reference genes

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