Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0039031 Helianthus annuus HOM05D001260 ORTHO05D224544 7.9e-51 203.4 95 100.0
HanXRQChr08g0221221 Helianthus annuus HOM05D001260 ORTHO05D002424 1.2e-14 83.2 34 94.1
ECA233G4014 Erigeron canadensis HOM05D001260 ORTHO05D002424 1.1e-12 76.6 34 85.3
Lsat_1_v5_gn_8_14661 Lactuca sativa HOM05D001260 ORTHO05D002424 2.0e-09 65.9 33 75.8
HanXRQChr09g0247031 Helianthus annuus HOM05D001260 ORTHO05D002424 3.4e-09 65.1 33 72.7
ECA232G0943 Erigeron canadensis HOM05D001260 ORTHO05D002424 7.5e-09 63.9 32 75.0
GSVIVG01016464001 Vitis vinifera HOM05D001260 ORTHO05D002424 7.5e-09 63.9 33 69.7
Sabra08G0044700 Salix brachista HOM05D001260 ORTHO05D002424 1.3e-08 63.2 36 69.4
Migut.F01300 Erythranthe guttata HOM05D001260 ORTHO05D002424 2.2e-08 62.4 32 75.0
Lsat_1_v5_gn_9_63441 Lactuca sativa HOM05D001260 ORTHO05D002424 2.2e-08 62.4 34 76.5
TAR636G1361 Trochodendron aralioides HOM05D001260 ORTHO05D002424 2.8e-08 62.0 32 71.9
Dinv16265 Davidia involucrata HOM05D001260 ORTHO05D002424 3.7e-08 61.6 42 61.9
Eucgr.J02122 Eucalyptus grandis HOM05D001260 ORTHO05D002424 4.9e-08 61.2 33 69.7
Nn2g11262 Nelumbo nucifera HOM05D001260 ORTHO05D002424 4.9e-08 61.2 32 68.8
Duzib114G0737 Durio zibethinus HOM05D001260 ORTHO05D002424 8.3e-08 60.5 32 68.8
Lalb_Chr15g0084491 Lupinus albus HOM05D001260 ORTHO05D002424 8.3e-08 60.5 33 66.7
MBI05_g02647_MAGBIO Magnolia biondii HOM05D001260 ORTHO05D002424 8.3e-08 60.5 32 71.9
Hma1.2p1_0026F.1_g016500 Hydrangea macrophylla HOM05D001260 ORTHO05D002424 1.1e-07 60.1 32 68.8
TPR.G10326 Trifolium pratense HOM05D001260 ORTHO05D002424 1.1e-07 60.1 33 66.7
Actinidia02911 Actinidia chinensis HOM05D001260 ORTHO05D002424 1.4e-07 59.7 32 68.8
Hma1.2p1_0039F.1_g024730 Hydrangea macrophylla HOM05D001260 ORTHO05D002424 1.4e-07 59.7 32 71.9
Manes.10G023400 Manihot esculenta HOM05D001260 ORTHO05D002424 1.4e-07 59.7 33 66.7
Psat5g128680 Pisum sativum HOM05D001260 ORTHO05D002424 1.4e-07 59.7 33 66.7
Thecc.10G034300 Theobroma cacao HOM05D001260 ORTHO05D002424 1.4e-07 59.7 32 68.8
Ca_16501_v3 Cicer arietinum L. HOM05D001260 ORTHO05D002424 1.8e-07 59.3 33 66.7
Ca_25276_v3 Cicer arietinum L. HOM05D002210 ORTHO05D002424 1.8e-07 59.3 33 66.7
Medtr3g069160 Medicago truncatula HOM05D001260 ORTHO05D002424 1.8e-07 59.3 33 66.7
Medtr3g069180 Medicago truncatula HOM05D001260 ORTHO05D002424 1.8e-07 59.3 33 66.7
Sabra10G0152300 Salix brachista HOM05D001260 ORTHO05D002424 1.8e-07 59.3 32 68.8
TWI38G0361 Tripterygium wilfordii HOM05D001260 ORTHO05D002424 1.8e-07 59.3 32 68.8
TWI63G0421 Tripterygium wilfordii HOM05D001260 ORTHO05D002424 1.8e-07 59.3 32 68.8
EL10Ac2g04684 Beta vulgaris HOM05D001260 ORTHO05D002424 2.4e-07 58.9 32 68.8
Potri.010G197800 Populus trichocarpa HOM05D001260 ORTHO05D002424 2.4e-07 58.9 32 68.8
PGR044G0660 Punica granatum HOM05D001260 ORTHO05D002424 2.4e-07 58.9 33 66.7
QL08p061736 Quercus lobata HOM05D001260 ORTHO05D002424 3.1e-07 58.5 32 68.8
HPP92_018127 Vanilla planifolia HOM05D002539 ORTHO05D002876 3.1e-07 58.5 36 58.3
COL.COLO4_25528 Corchorus olitorius HOM05D001260 ORTHO05D002424 4.1e-07 58.2 28 78.6
Gohir.D06G171200 Gossypium hirsutum HOM05D001260 ORTHO05D002424 7.0e-07 57.4 32 68.8
Gohir.D06G171300 Gossypium hirsutum HOM05D001260 ORTHO05D002424 7.0e-07 57.4 32 68.8
Os03g0111100 Oryza sativa ssp. japonica HOM05D001260 ORTHO05D002424 7.0e-07 57.4 32 65.6
SalBow6G0138 Salvia bowleyana HOM05D001260 ORTHO05D002424 7.0e-07 57.4 37 62.2
CiPaw.02G187400 Carya illinoinensis HOM05D001260 ORTHO05D002424 9.2e-07 57.0 32 65.6
Haze_17131 Corylus avellana HOM05D001260 ORTHO05D002424 9.2e-07 57.0 32 65.6
Nitab4.5_0000826g0240 Nicotiana tabacum HOM05D001260 ORTHO05D002424 9.2e-07 57.0 32 68.8
SalBow6G0774 Salvia bowleyana HOM05D001260 ORTHO05D002424 9.2e-07 57.0 37 62.2
CANSAT56G0693 Cannabis sativa HOM05D001260 ORTHO05D002424 1.2e-06 56.6 32 62.5
Ca_17117_v3 Cicer arietinum L. HOM05D001260 ORTHO05D002424 1.2e-06 56.6 32 65.6
Glyma.02G251400 Glycine max HOM05D001260 ORTHO05D002424 1.2e-06 56.6 32 65.6
Glyma.14G065400 Glycine max HOM05D001260 ORTHO05D002424 1.2e-06 56.6 32 65.6
Medtr5g081250 Medicago truncatula HOM05D001260 ORTHO05D002424 1.2e-06 56.6 32 65.6
Phvul.008G230100 Phaseolus vulgaris HOM05D001260 ORTHO05D002424 1.2e-06 56.6 33 63.6
Psat7g258800 Pisum sativum HOM05D001260 ORTHO05D002424 1.2e-06 56.6 32 65.6
Solyc05g052920.4 Solanum lycopersicum HOM05D001260 ORTHO05D002424 1.6e-06 56.2 32 62.5
Sopen05g031430 Solanum pennellii HOM05D001260 ORTHO05D002424 1.6e-06 56.2 32 62.5
Gohir.A06G165900 Gossypium hirsutum HOM05D001260 ORTHO05D002424 2.0e-06 55.8 32 65.6
Lj6g0027495 Lotus japonicus HOM05D001260 ORTHO05D002424 2.0e-06 55.8 33 60.6
Atru.chr12.297 Acer truncatum HOM05D001260 ORTHO05D002424 2.7e-06 55.5 32 62.5
Atru.chr12.335 Acer truncatum HOM05D001260 ORTHO05D002424 2.7e-06 55.5 32 62.5
arahy.Tifrunner.gnm1.ann1.TM7LMJ Arachis hypogaea HOM05D001260 ORTHO05D004134 2.7e-06 55.5 32 65.6
CAN.G945.9 Capsicum annuum HOM05D001260 ORTHO05D002424 2.7e-06 55.5 32 62.5
Ciclev10031375m.g Citrus clementina HOM05D001260 ORTHO05D002424 2.7e-06 55.5 32 65.6
Sopen04g008630 Solanum pennellii HOM05D001260 ORTHO05D002424 2.7e-06 55.5 32 65.6
VMungo0647G0039 Vigna mungo HOM05D001260 ORTHO05D002424 2.7e-06 55.5 33 60.6
Zm00001eb404110 Zea mays HOM05D001260 ORTHO05D002424 2.7e-06 55.5 32 62.5
Zm00001eb421680 Zea mays HOM05D001260 ORTHO05D010106 2.7e-06 55.5 32 62.5
CAN.G1237.17 Capsicum annuum HOM05D001260 ORTHO05D002424 3.5e-06 55.1 32 65.6
ATR0559G016 Amborella trichopoda HOM05D001260 ORTHO05D002424 4.5e-06 54.7 32 62.5
arahy.Tifrunner.gnm1.ann1.1G1YD8 Arachis hypogaea HOM05D001260 ORTHO05D002424 4.5e-06 54.7 33 63.6
CDE02G1800 Ceratophyllum demersum HOM05D001260 ORTHO05D002424 4.5e-06 54.7 32 59.4
LjContig00141g0013846 Lotus japonicus HOM05D001260 ORTHO05D002424 4.5e-06 54.7 32 62.5
Prupe.2G241100 Prunus persica HOM05D001260 ORTHO05D002424 4.5e-06 54.7 32 68.8
FAN03G3127 Fragaria x ananassa HOM05D001260 ORTHO05D002424 5.9e-06 54.3 32 68.8
ClCG09G018830 Citrullus lanatus HOM05D001260 ORTHO05D002424 7.8e-06 53.9 32 62.5
DCAR_024867 Daucus carota HOM05D001260 ORTHO05D002424 7.8e-06 53.9 33 66.7
Glyma.18G034200 Glycine max HOM05D001260 ORTHO05D002424 7.8e-06 53.9 33 60.6


User provided reference genes

Program Settings