Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 6.9e-114 414.1 221 100.0
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 1.1e-63 247.3 178 77.0
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 2.2e-59 233.0 182 70.9
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 2.7e-46 189.5 166 60.2
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 4.7e-46 188.7 148 66.2
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 1.4e-45 187.2 147 65.3
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 5.2e-45 185.3 183 57.4
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 8.8e-45 184.5 172 57.0
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 2.6e-44 183.0 145 64.1
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 2.6e-44 183.0 145 64.1
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 2.6e-44 183.0 142 65.5
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.3e-43 180.6 181 56.9
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.3e-43 180.6 145 62.8
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 2.8e-43 179.5 171 57.9
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 3.7e-43 179.1 145 62.8
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 8.3e-43 177.9 145 62.8
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 1.4e-42 177.2 145 65.5
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 1.4e-42 177.2 183 51.9
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 1.4e-42 177.2 144 62.5
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 1.4e-42 177.2 180 55.6
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 5.4e-42 175.3 178 53.4
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 7.0e-42 174.9 176 55.1
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 9.2e-42 174.5 143 61.5
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 1.2e-41 174.1 183 54.1
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 1.6e-41 173.7 166 58.4
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 2.0e-41 173.3 140 61.4
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 2.7e-41 172.9 176 57.4
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 5.9e-41 171.8 143 60.1
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 5.9e-41 171.8 142 64.8
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 5.9e-41 171.8 185 53.5
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 7.7e-41 171.4 176 56.2
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 1.3e-40 170.6 166 58.4
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.7e-40 170.2 178 55.1
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 1.7e-40 170.2 175 53.1
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 2.3e-40 169.9 145 60.0
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 2.3e-40 169.9 167 56.3
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 2.3e-40 169.9 143 60.1
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.9e-40 169.5 178 55.6
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 3.8e-40 169.1 183 51.4
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 5.0e-40 168.7 173 53.8
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 6.6e-40 168.3 158 57.6
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 1.1e-39 167.5 177 52.5
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 1.9e-39 166.8 143 59.4
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 3.3e-39 166.0 148 58.8
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 3.3e-39 166.0 171 54.4
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 4.3e-39 165.6 167 57.5
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 5.6e-39 165.2 184 51.6
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 7.3e-39 164.9 149 61.1
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 9.5e-39 164.5 173 52.0
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 9.5e-39 164.5 187 51.3
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 2.1e-38 163.3 172 52.9
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 6.1e-38 161.8 177 50.3
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 8.0e-38 161.4 178 51.1
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 1.0e-37 161.0 167 55.7
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 1.4e-37 160.6 180 51.1
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 1.8e-37 160.2 182 52.7
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 2.3e-37 159.8 204 46.6
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 3.0e-37 159.5 179 51.4
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 2.6e-36 156.4 176 51.1
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 2.6e-36 156.4 173 47.4
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 2.6e-36 156.4 145 57.2
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 3.4e-36 156.0 161 54.0
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 7.5e-36 154.8 181 49.7
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 7.5e-36 154.8 181 49.7
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 9.8e-36 154.5 180 50.6
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 1.3e-35 154.1 181 49.7
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 1.7e-35 153.7 145 55.2
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 2.9e-35 152.9 117 65.0
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 3.7e-35 152.5 177 51.4
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 3.7e-35 152.5 171 52.6
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 3.7e-35 152.5 181 49.2
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 1.4e-34 150.6 172 48.8
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 1.8e-34 150.2 177 49.7
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 1.8e-34 150.2 144 55.6
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 2.4e-34 149.8 174 46.6
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 2.7e-33 146.4 185 48.6
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 4.6e-33 145.6 170 48.8
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 5.0e-32 142.1 134 57.5
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 8.6e-32 141.4 180 47.8
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 1.5e-31 140.6 202 42.1
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 3.1e-29 132.9 117 57.3
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 5.2e-29 132.1 126 53.2
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 2.6e-28 129.8 116 57.8
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 1.7e-27 127.1 179 44.1
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 3.7e-27 125.9 110 58.2
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 1.9e-26 123.6 110 57.3
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 3.2e-26 122.9 114 53.5
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.7e-24 117.1 120 55.0
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 3.6e-22 109.4 85 65.9
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 4.7e-22 109.0 125 48.8
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 4.0e-21 105.9 95 56.8
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 2.0e-20 103.6 141 41.1
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 6.0e-17 92.0 101 57.4
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 2.3e-16 90.1 91 51.6
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 6.6e-16 88.6 134 43.3
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 4.0e-13 79.3 75 52.0
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 2.6e-12 76.6 62 56.5
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 2.1e-09 67.0 106 39.6
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 6.0e-09 65.5 128 32.8
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 6.0e-09 65.5 110 36.4
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 1.9e-07 60.5 169 27.8


User provided reference genes

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