Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 7.5e-232 807.0 453 100.0
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 1.7e-175 619.8 459 78.0
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 2.5e-155 552.7 420 77.4
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 5.6e-155 551.6 455 71.4
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 8.2e-130 468.0 464 61.4
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 7.0e-129 464.9 464 59.5
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 1.5e-128 463.8 456 62.5
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 2.2e-127 459.9 464 59.1
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 2.5e-126 456.4 457 60.4
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 8.0e-125 451.4 458 59.4
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 1.5e-123 447.2 411 62.5
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 2.2e-122 443.4 457 58.6
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.2e-120 437.6 477 58.1
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.7e-119 433.7 455 60.2
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 2.9e-119 433.0 459 58.8
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 2.9e-119 433.0 455 59.3
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 6.5e-119 431.8 428 60.7
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 2.5e-118 429.9 455 60.2
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 2.5e-118 429.9 460 57.6
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 5.5e-118 428.7 451 58.1
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 1.6e-117 427.2 427 59.0
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 4.7e-117 425.6 475 55.6
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 8.0e-117 424.9 453 56.3
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 1.8e-116 423.7 446 58.1
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 3.0e-116 422.9 467 57.8
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 4.0e-116 422.5 443 58.9
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 5.2e-116 422.2 515 55.5
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 8.8e-116 421.4 473 57.7
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 3.3e-115 419.5 430 59.1
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 7.5e-115 418.3 478 56.7
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.3e-114 417.5 453 56.1
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 3.7e-114 416.0 458 59.4
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 3.7e-114 416.0 456 55.7
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 4.8e-114 415.6 464 58.2
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 1.1e-113 414.5 463 57.2
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 1.4e-113 414.1 455 58.7
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.8e-113 413.7 457 56.5
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 4.1e-113 412.5 379 62.8
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 5.3e-113 412.1 398 62.6
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 1.2e-112 411.0 459 56.9
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.6e-112 410.6 386 59.6
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 3.5e-112 409.5 455 55.8
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 5.9e-112 408.7 381 66.7
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 1.3e-111 407.5 468 55.6
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 1.7e-111 407.1 452 57.3
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 2.2e-111 406.8 456 58.8
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 5.0e-111 405.6 446 58.1
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 6.5e-111 405.2 468 55.8
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 6.5e-111 405.2 465 53.8
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 7.2e-110 401.7 391 59.1
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 2.7e-109 399.8 461 57.0
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 6.1e-109 398.7 460 55.9
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 4.0e-108 396.0 400 57.5
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 5.2e-108 395.6 413 57.1
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 8.8e-108 394.8 396 63.1
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 8.8e-108 394.8 455 57.4
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 4.4e-107 392.5 453 53.2
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 5.7e-107 392.1 424 54.0
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 5.7e-107 392.1 471 54.1
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 9.8e-107 391.3 404 56.9
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 3.7e-106 389.4 380 64.2
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 6.3e-106 388.7 461 55.3
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.1e-105 387.9 424 54.2
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 4.7e-101 372.5 325 66.5
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 1.8e-100 370.5 463 53.1
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 5.2e-100 369.0 451 52.1
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 8.9e-100 368.2 439 52.4
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 2.6e-99 366.7 370 59.2
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 1.8e-97 360.5 460 54.1
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 4.5e-96 355.9 464 53.7
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 1.0e-95 354.8 330 66.1
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 2.5e-94 350.1 472 50.2
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.2e-93 347.8 466 49.6
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 2.1e-93 347.1 462 53.2
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 3.6e-93 346.3 398 52.8
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 4.7e-93 345.9 477 51.6
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 4.7e-93 345.9 477 51.6
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 6.1e-93 345.5 463 53.1
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 4.0e-92 342.8 466 52.1
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 3.4e-91 339.7 433 52.2
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 9.8e-91 338.2 310 61.9
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 3.7e-90 336.3 459 54.0
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 4.9e-90 335.9 433 51.7
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 1.4e-89 334.3 388 51.8
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 1.9e-89 334.0 314 63.4
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 1.2e-88 331.3 461 50.8
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 3.5e-88 329.7 460 49.1
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 6.0e-88 328.9 403 54.3
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 6.0e-88 328.9 475 48.2
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 8.6e-87 325.1 425 48.5
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 3.3e-86 323.2 462 50.0
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 8.0e-85 318.5 338 55.0
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 2.3e-84 317.0 456 51.3
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 3.1e-84 316.6 346 57.2
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 3.1e-84 316.6 386 54.4
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 1.2e-83 314.7 453 46.8
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 1.5e-83 314.3 464 49.4
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 2.6e-83 313.5 445 51.5
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 1.7e-82 310.8 446 51.1
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 1.4e-81 307.8 470 49.1
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 1.4e-81 307.8 403 49.6
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 3.2e-81 306.6 444 46.4
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 4.1e-81 306.2 470 49.1
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 7.8e-80 302.0 603 40.1
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 7.8e-80 302.0 603 40.1
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 3.9e-79 299.7 306 59.8
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 8.6e-79 298.5 319 60.5
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 5.6e-78 295.8 368 53.0
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 2.8e-77 293.5 367 53.7
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.1e-76 291.6 456 48.7
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 2.3e-76 290.4 676 36.5
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 6.8e-76 288.9 328 57.9
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 4.9e-74 282.7 321 53.3
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 6.0e-72 275.8 447 45.6
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 7.8e-72 275.4 367 48.8
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 1.4e-68 264.6 504 40.3
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 2.0e-67 260.8 215 66.0
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 3.5e-64 250.0 382 46.1
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 1.0e-63 248.4 328 52.7
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 9.9e-59 231.9 202 61.4
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 7.8e-56 222.2 400 43.5
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 3.3e-54 216.9 197 59.4
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 6.2e-53 212.6 119 89.9
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 1.3e-45 188.3 352 47.4
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 3.7e-45 186.8 102 86.3
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 3.2e-41 173.7 336 42.9
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 2.1e-40 171.0 332 42.5
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 3.7e-37 160.2 405 39.8
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 3.1e-36 157.1 176 47.2
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 4.1e-28 130.2 191 38.2
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 6.9e-28 129.4 67 94.0
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.9e-26 124.0 295 41.0
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 4.2e-25 120.2 191 46.1
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 5.5e-25 119.8 159 49.1
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 9.4e-25 119.0 74 83.8
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 5.1e-23 113.2 250 38.4
MELO3C025953.2 Cucumis melo HOM05D004969 ORTHO05D006085 8.8e-23 112.5 64 82.8
Oeu000537.1 Olea europaea HOM05D004969 ORTHO05D006085 3.3e-22 110.5 69 81.2
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 4.8e-21 106.7 331 42.0
AUR62004590 Chenopodium quinoa HOM05D004969 ORTHO05D006085 5.0e-18 96.7 205 40.5
FvH4_2g09383 Fragaria vesca HOM05D004969 ORTHO05D006085 6.7e-15 86.3 47 85.1
Hund14746 Selenicereus undatus HOM05D004969 ORTHO05D006085 3.7e-13 80.5 51 70.6
SHI30104 Sapria himalayana HOM05D007291 ORTHO05D009038 2.6e-11 74.3 65 52.3
MELO3C033346.2 Cucumis melo HOM05D004969 ORTHO05D044988 8.0e-08 62.8 52 63.5
Cre12.g490650 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 1.0e-07 62.4 161 27.3
Gohir.A07G173840 Gossypium hirsutum HOM05D004969 ORTHO05D006085 5.2e-07 60.1 143 37.1
HPP92_017745 Vanilla planifolia HOM05D004969 ORTHO05D006085 5.2e-07 60.1 117 40.2
CARHR196590 Cardamine hirsuta HOM05D004969 ORTHO05D006085 8.8e-07 59.3 136 38.2
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 1.1e-06 58.9 51 54.9
Haze_10772 Corylus avellana HOM05D004969 ORTHO05D006085 1.1e-06 58.9 81 46.9
MD02G1236200 Malus domestica HOM05D005192 ORTHO05D006023 1.1e-06 58.9 100 43.0


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