Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 2.8e-123 445.3 219 100.0
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 2.8e-123 445.3 219 100.0
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 3.0e-85 318.9 160 99.4
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 3.0e-85 318.9 160 99.4
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 3.4e-81 305.4 160 95.6
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 6.6e-77 291.2 224 67.4
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 9.9e-73 277.3 220 66.4
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 2.0e-57 226.5 201 64.2
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 7.2e-55 218.0 226 52.2
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 1.2e-54 217.2 223 53.4
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 2.1e-54 216.5 225 53.8
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 2.7e-54 216.1 229 54.1
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 7.9e-54 214.5 230 51.7
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 7.9e-54 214.5 220 55.0
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.8e-53 213.4 227 50.7
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 2.3e-53 213.0 227 50.7
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 6.7e-53 211.5 225 53.3
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 8.7e-53 211.1 225 52.0
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 4.3e-52 208.8 229 53.3
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 9.7e-52 207.6 223 54.3
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 3.7e-51 205.7 226 53.1
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 1.1e-50 204.1 227 50.7
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 1.1e-50 204.1 222 50.0
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.4e-50 203.0 220 50.9
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 2.4e-50 203.0 220 51.8
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 3.1e-50 202.6 227 50.2
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 3.4e-49 199.1 248 46.8
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 4.5e-49 198.7 212 52.4
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 4.5e-49 198.7 229 49.3
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 2.9e-48 196.1 220 50.5
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 3.2e-47 192.6 220 50.5
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 4.2e-47 192.2 250 44.4
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 6.1e-46 188.3 218 50.9
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 1.0e-45 187.6 225 50.2
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 2.3e-45 186.4 211 49.3
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 5.1e-45 185.3 223 49.3
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 6.7e-45 184.9 219 49.3
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 4.4e-44 182.2 234 46.2
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 2.2e-43 179.9 263 43.3
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 2.8e-43 179.5 221 48.0
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 3.7e-43 179.1 240 44.2
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 3.1e-42 176.0 255 45.9
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 5.9e-41 171.8 220 45.9
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.7e-40 170.2 209 49.3
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 4.2e-39 165.6 230 48.3
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 5.5e-39 165.2 219 44.7
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.7e-38 162.9 222 42.8
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 1.8e-37 160.2 253 41.9
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 6.7e-37 158.3 77 97.4
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.3e-35 154.1 236 42.4
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 3.7e-35 152.5 249 40.6
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.6e-28 129.8 145 50.3
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 4.1e-26 122.5 165 46.1
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 5.3e-26 122.1 257 35.4
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 9.1e-26 121.3 196 41.8
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.6e-25 120.6 165 43.6
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 2.7e-25 119.8 158 48.7
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 9.4e-23 111.3 208 39.9
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 1.6e-17 94.0 145 44.1
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 2.7e-17 93.2 151 41.7
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 7.7e-17 91.7 75 56.0
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 1.0e-13 81.3 69 56.5
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 1.1e-10 71.2 39 74.4


User provided reference genes

Program Settings