Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 3.3e-71 271.6 134 100.0
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 1.6e-57 226.1 201 64.2
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 1.6e-57 226.1 201 64.2
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 1.5e-39 166.4 198 50.0
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 9.8e-39 163.7 203 47.8
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 2.3e-32 142.5 161 54.7
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 3.1e-32 142.1 161 54.7
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 3.1e-32 142.1 161 54.7
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 3.1e-32 142.1 200 43.0
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 2.2e-30 136.0 204 41.7
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 1.9e-29 132.9 203 41.4
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.9e-29 132.9 210 38.6
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 2.4e-29 132.5 210 38.6
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 7.0e-29 131.0 201 40.8
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 1.6e-28 129.8 205 42.0
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 1.0e-27 127.1 201 39.8
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 1.7e-27 126.3 218 39.4
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 2.3e-27 125.9 206 40.3
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 3.0e-27 125.6 200 40.0
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 3.9e-27 125.2 206 39.3
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 5.0e-27 124.8 197 40.1
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 6.6e-27 124.4 201 38.3
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 8.6e-27 124.0 63 95.2
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 8.6e-27 124.0 201 38.3
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.1e-26 123.6 200 39.5
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 1.5e-26 123.2 196 38.8
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 2.5e-26 122.5 200 39.0
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 2.5e-26 122.5 202 39.1
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 5.6e-26 121.3 200 38.5
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 8.1e-25 117.5 202 38.1
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.8e-24 116.3 206 36.9
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 3.1e-24 115.5 214 36.0
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 4.0e-24 115.2 208 37.0
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 5.2e-24 114.8 225 36.0
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 2.0e-23 112.8 225 35.6
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 3.4e-23 112.1 160 42.5
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 3.4e-23 112.1 198 37.9
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 4.4e-23 111.7 221 34.4
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 9.8e-23 110.5 192 35.9
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 1.3e-22 110.2 197 36.5
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 3.7e-22 108.6 184 37.0
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 1.1e-21 107.1 186 37.1
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 1.2e-20 103.6 243 32.1
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 2.1e-20 102.8 233 33.5
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 1.3e-19 100.1 98 58.2
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 1.3e-19 100.1 196 34.7
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 2.5e-18 95.9 230 32.6
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 5.6e-18 94.7 100 52.0
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 9.5e-18 94.0 188 34.6
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 5.2e-16 88.2 194 36.6
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 9.9e-15 84.0 227 28.6
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.3e-14 83.6 79 51.9
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.2e-14 82.8 75 57.3
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 6.4e-14 81.3 157 36.3
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 2.4e-13 79.3 167 33.5
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 3.2e-13 79.0 178 31.5
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 5.4e-13 78.2 191 31.9
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 1.1e-10 70.5 160 33.1
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 5.6e-10 68.2 38 78.9
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 9.6e-10 67.4 233 27.9
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 1.4e-08 63.5 33 75.8
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.7e-06 56.6 56 46.4


User provided reference genes

Program Settings