Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0032001 Helianthus annuus HOM05D006096 ORTHO05D007775 1.2e-39 166.0 83 100.0
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 5.2e-22 107.5 65 76.9
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 8.8e-22 106.7 65 78.5
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 2.6e-21 105.1 66 72.7
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 2.6e-21 105.1 65 76.9
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 2.6e-21 105.1 89 61.8
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 4.4e-21 104.4 65 76.9
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 4.4e-21 104.4 66 75.8
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 4.4e-21 104.4 73 69.9
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 5.7e-21 104.0 66 72.7
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 5.7e-21 104.0 69 73.9
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 7.5e-21 103.6 66 75.8
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 7.5e-21 103.6 66 74.2
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 7.5e-21 103.6 65 73.8
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 9.7e-21 103.2 65 73.8
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 9.7e-21 103.2 65 75.4
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 1.3e-20 102.8 65 73.8
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.3e-20 102.8 65 73.8
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 1.3e-20 102.8 65 76.9
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 1.3e-20 102.8 65 73.8
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 1.7e-20 102.4 65 75.4
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 1.7e-20 102.4 64 76.6
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 1.7e-20 102.4 69 71.0
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 2.2e-20 102.1 65 73.8
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 2.2e-20 102.1 65 75.4
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 2.8e-20 101.7 66 74.2
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 2.8e-20 101.7 89 58.4
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 2.8e-20 101.7 73 65.8
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 2.8e-20 101.7 65 72.3
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 2.8e-20 101.7 65 70.8
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 2.8e-20 101.7 73 67.1
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 2.8e-20 101.7 65 78.5
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 2.8e-20 101.7 65 75.4
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 3.7e-20 101.3 65 72.3
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 3.7e-20 101.3 65 78.5
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 3.7e-20 101.3 69 69.6
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 4.8e-20 100.9 73 65.8
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 4.8e-20 100.9 65 78.5
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 4.8e-20 100.9 69 72.5
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 4.8e-20 100.9 73 63.0
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 8.2e-20 100.1 65 78.5
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 1.1e-19 99.8 65 70.8
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 1.1e-19 99.8 65 72.3
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.4e-19 99.4 65 76.9
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.4e-19 99.4 65 76.9
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.4e-19 99.4 65 76.9
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.4e-19 99.4 65 76.9
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 1.8e-19 99.0 66 69.7
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 1.8e-19 99.0 65 76.9
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 1.8e-19 99.0 69 68.1
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 3.1e-19 98.2 65 69.2
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 3.1e-19 98.2 65 70.8
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 4.1e-19 97.8 73 63.0
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 4.1e-19 97.8 73 68.5
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 4.1e-19 97.8 65 72.3
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 4.1e-19 97.8 65 76.9
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 4.1e-19 97.8 65 75.4
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 4.1e-19 97.8 65 69.2
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 7.0e-19 97.1 65 75.4
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 9.1e-19 96.7 73 61.6
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 9.1e-19 96.7 69 69.6
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 9.1e-19 96.7 73 65.8
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 1.2e-18 96.3 73 67.1
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 2.0e-18 95.5 66 66.7
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 2.0e-18 95.5 65 67.7
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 2.7e-18 95.1 65 67.7
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 7.7e-18 93.6 65 66.2
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 7.7e-18 93.6 65 66.2
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 7.7e-18 93.6 65 66.2
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 1.0e-17 93.2 64 67.2
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 1.3e-17 92.8 73 58.9
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 1.7e-17 92.4 65 66.2
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 1.7e-17 92.4 65 66.2
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 1.7e-17 92.4 65 66.2
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 1.7e-17 92.4 74 59.5
Carub.0006s0878 Capsella rubella HOM05D006096 ORTHO05D007775 2.2e-17 92.0 65 63.1
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 1.1e-16 89.7 72 59.7
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 5.5e-16 87.4 69 63.8
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 5.5e-16 87.4 69 63.8
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 7.2e-16 87.0 73 56.2
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 7.2e-16 87.0 65 61.5
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 2.7e-15 85.1 65 64.6
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 4.7e-15 84.3 69 60.9
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 1.0e-14 83.2 69 60.9
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 5.2e-14 80.9 69 55.1
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 1.2e-13 79.7 65 56.9
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 1.5e-13 79.3 74 54.1
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 4.4e-13 77.8 64 59.4
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 7.5e-13 77.0 68 51.5
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 1.7e-12 75.9 67 52.2
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 2.2e-12 75.5 52 67.3
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 8.3e-12 73.6 69 49.3
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 2.2e-09 65.5 70 44.3
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 1.5e-08 62.8 44 68.2
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 7.2e-08 60.5 41 70.7
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 2.1e-07 58.9 62 50.0
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 1.4e-06 56.2 56 48.2


User provided reference genes

Program Settings