Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 1.9e-127 459.5 281 100.0
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 1.8e-61 240.4 299 57.2
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.1e-45 188.0 235 49.4
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 1.8e-45 187.2 292 40.8
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 3.1e-45 186.4 251 41.4
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 5.9e-44 182.2 288 43.4
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 1.7e-43 180.6 240 51.2
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 3.9e-43 179.5 284 43.7
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 1.9e-42 177.2 242 47.9
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 9.5e-42 174.9 257 39.7
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 9.5e-42 174.9 253 42.7
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 1.6e-41 174.1 245 41.6
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 4.7e-41 172.6 296 42.6
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 1.0e-40 171.4 237 45.6
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 1.4e-40 171.0 278 38.8
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 3.1e-40 169.9 235 40.4
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 4.0e-40 169.5 318 35.8
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 8.9e-40 168.3 301 42.9
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 8.9e-40 168.3 239 41.0
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 1.5e-39 167.5 288 39.9
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 2.0e-39 167.2 236 40.7
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 2.6e-39 166.8 310 36.5
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 2.6e-39 166.8 263 40.7
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 3.7e-38 162.9 285 44.6
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 4.9e-38 162.5 253 47.8
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 1.4e-37 161.0 290 39.7
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 1.4e-37 161.0 257 42.8
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 1.9e-37 160.6 253 37.5
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 2.4e-37 160.2 243 42.0
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 3.2e-37 159.8 234 40.2
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 5.4e-37 159.1 254 41.7
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 7.0e-37 158.7 299 42.8
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 7.0e-37 158.7 295 42.0
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 9.2e-37 158.3 283 37.5
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.2e-36 157.9 254 40.9
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 2.7e-36 156.8 261 40.2
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 2.7e-36 156.8 236 39.4
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 2.7e-36 156.8 291 38.8
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 4.6e-36 156.0 245 40.8
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 7.8e-36 155.2 296 38.2
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 7.8e-36 155.2 255 42.7
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 1.3e-35 154.5 252 38.1
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 2.3e-35 153.7 283 42.4
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 3.9e-35 152.9 250 45.6
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 6.6e-35 152.1 250 46.0
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.5e-34 151.0 243 49.4
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 1.5e-34 151.0 301 43.9
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 1.9e-34 150.6 312 39.7
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 4.3e-34 149.4 278 37.1
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.2e-33 147.9 244 41.0
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.2e-33 147.9 244 41.0
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 1.6e-33 147.5 175 42.9
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 2.1e-33 147.1 270 41.5
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 2.8e-33 146.7 293 37.2
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 6.2e-33 145.6 286 50.7
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 6.2e-33 145.6 250 40.4
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 1.1e-32 144.8 286 44.1
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 1.4e-32 144.4 241 44.4
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 2.3e-32 143.7 262 44.7
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 2.3e-32 143.7 291 43.6
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.5e-31 141.0 250 47.2
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 2.6e-31 140.2 192 40.1
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 5.8e-31 139.0 229 42.8
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 9.8e-31 138.3 191 42.9
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 3.7e-30 136.3 284 37.3
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.9e-30 136.0 217 62.2
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 4.9e-30 136.0 292 36.0
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 6.4e-30 135.6 291 41.9
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 8.3e-30 135.2 242 45.0
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 1.1e-29 134.8 297 32.0
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 9.2e-29 131.7 188 40.4
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 1.6e-28 131.0 177 41.2
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 2.1e-28 130.6 254 42.1
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 6.0e-28 129.0 291 47.1
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 6.0e-28 129.0 291 47.1
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 6.0e-28 129.0 246 44.3
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 6.0e-28 129.0 289 42.6
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 7.8e-28 128.6 182 39.6
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 2.3e-27 127.1 242 43.0
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 3.0e-27 126.7 289 39.8
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 3.9e-27 126.3 290 44.5
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 5.1e-27 125.9 210 41.9
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 6.6e-27 125.6 176 39.2
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 2.5e-26 123.6 311 33.1
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 5.6e-26 122.5 246 43.5
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 9.5e-26 121.7 246 43.5
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 9.9e-23 111.7 321 30.2
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 1.2e-20 104.8 163 38.0
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 2.1e-20 104.0 100 49.0
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 5.6e-18 95.9 119 40.3
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 1.2e-17 94.7 298 30.5
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 3.4e-15 86.7 106 43.4
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 3.8e-14 83.2 175 34.9
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 4.8e-09 66.2 121 33.9
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 1.1e-08 65.1 225 28.4
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 1.2e-07 61.6 83 54.2
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 7.6e-07 58.9 113 32.7


User provided reference genes

Program Settings