Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 2.1e-230 802.0 393 100.0
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 1.2e-158 563.5 406 71.9
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 4.9e-155 551.6 410 67.1
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 1.1e-154 550.4 412 66.3
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 3.0e-152 542.3 405 66.7
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 3.3e-151 538.9 414 65.0
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 7.3e-151 537.7 416 63.7
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.1e-149 533.9 417 64.5
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 4.0e-149 531.9 410 64.4
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 5.2e-149 531.6 425 62.4
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 2.0e-148 529.6 374 69.0
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 3.4e-148 528.9 397 65.5
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 2.9e-147 525.8 397 65.7
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 2.9e-147 525.8 378 66.9
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 3.8e-147 525.4 408 64.7
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 1.9e-146 523.1 409 65.3
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 7.1e-146 521.2 412 64.3
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 9.3e-146 520.8 399 63.4
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 3.5e-145 518.8 419 63.7
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 7.8e-145 517.7 428 62.9
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 1.7e-144 516.5 412 65.0
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 5.1e-144 515.0 379 66.8
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 8.7e-144 514.2 388 64.4
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 3.3e-143 512.3 398 65.3
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 3.3e-143 512.3 412 63.3
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 5.6e-143 511.5 324 78.1
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 7.3e-143 511.1 394 65.0
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 7.3e-143 511.1 378 65.9
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 1.3e-142 510.4 390 65.1
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 2.1e-142 509.6 416 62.0
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 2.8e-142 509.2 417 62.8
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 3.6e-142 508.8 422 63.5
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 8.1e-142 507.7 394 64.2
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 1.1e-141 507.3 395 64.8
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 1.1e-141 507.3 388 65.7
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 4.0e-141 505.4 404 62.9
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 6.9e-141 504.6 396 65.7
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 6.9e-141 504.6 422 63.7
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 1.2e-140 503.8 408 62.0
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 1.7e-139 500.0 400 63.0
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 4.9e-139 498.4 395 63.3
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 6.4e-139 498.0 376 64.1
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.4e-138 496.9 419 62.1
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 9.3e-138 494.2 423 61.5
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 1.6e-137 493.4 442 58.8
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 3.9e-136 488.8 375 64.5
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 3.9e-136 488.8 414 59.4
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 7.4e-135 484.6 393 63.9
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 9.6e-135 484.2 406 61.6
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 2.8e-134 482.6 374 61.5
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 2.8e-134 482.6 357 67.2
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 3.6e-134 482.3 370 63.0
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.1e-133 480.7 389 62.0
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 5.8e-132 474.9 402 60.2
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 1.1e-130 470.7 391 60.4
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.4e-130 469.5 394 61.4
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.2e-129 467.2 375 62.7
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.2e-124 450.7 379 60.7
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 1.2e-124 450.7 370 61.1
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 7.1e-122 441.4 449 53.7
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 4.8e-118 428.7 405 54.8
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.1e-117 427.6 395 54.7
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 3.4e-116 422.5 342 62.9
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 4.3e-111 405.6 420 51.7
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 1.3e-110 404.1 294 66.3
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 2.6e-108 396.4 302 67.2
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 4.2e-106 389.0 431 50.8
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 9.4e-106 387.9 394 52.8
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 7.9e-105 384.8 297 64.6
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 4.1e-101 372.5 329 57.8
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 5.3e-101 372.1 364 54.1
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 7.7e-100 368.2 276 63.8
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 5.7e-95 352.1 284 61.6
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 1.0e-91 341.3 369 49.9
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.1e-89 333.6 316 52.5
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 6.1e-89 332.0 423 47.3
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 3.0e-88 329.7 324 52.2
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 9.7e-87 324.7 402 44.3
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 1.4e-80 304.3 290 56.6
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 1.2e-73 281.2 205 64.4
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 2.3e-72 276.9 198 67.7
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 4.9e-70 269.2 348 43.4
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.8e-69 267.3 226 58.4
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 7.8e-68 261.9 372 41.1
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.1e-61 241.5 239 51.9
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.2e-57 228.0 204 61.8
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 5.2e-56 222.6 276 46.4
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 1.5e-42 177.9 186 50.0
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 3.6e-41 173.3 135 66.7
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 2.1e-36 157.5 142 54.2
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.8e-32 144.4 128 64.1
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 6.9e-32 142.5 101 67.3
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 7.8e-28 129.0 123 53.7
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 2.5e-26 124.0 111 61.3
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 8.1e-25 119.0 123 52.8
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 6.0e-20 102.8 121 43.0
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 6.0e-20 102.8 121 43.0
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 8.7e-19 99.0 111 45.9
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 1.8e-16 91.3 84 57.1
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 5.5e-13 79.7 86 51.2
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 9.3e-13 79.0 51 70.6
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 6.7e-11 72.8 43 83.7
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 1.5e-10 71.6 65 60.0


User provided reference genes

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