Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0030001 Helianthus annuus HOM05D044223 ORTHO05D002626 6.9e-53 210.3 102 100.0
HanXRQChr07g0186691 Helianthus annuus HOM05D044223 ORTHO05D222325 9.8e-23 110.2 55 96.4
ECA248G2989 Erigeron canadensis HOM05D002221 ORTHO05D002626 4.0e-08 61.6 57 56.1
HanXRQChr08g0207961 Helianthus annuus HOM05D002221 ORTHO05D002626 8.9e-08 60.5 57 56.1
Lsat_1_v5_gn_6_62421 Lactuca sativa HOM05D002221 ORTHO05D010139 8.9e-08 60.5 57 56.1
AUR62021835 Chenopodium quinoa HOM05D002221 ORTHO05D010139 3.4e-07 58.5 58 46.6
CDE07G1288 Ceratophyllum demersum HOM05D002221 ORTHO05D002626 4.4e-07 58.2 40 65.0
Nn1g03259 Nelumbo nucifera HOM05D002221 ORTHO05D002626 5.8e-07 57.8 56 57.1
Oeu052869.2 Olea europaea HOM05D002221 ORTHO05D002626 5.8e-07 57.8 77 44.2
Nitab4.5_0000143g0060 Nicotiana tabacum HOM05D002221 ORTHO05D010139 1.7e-06 56.2 40 67.5
Nitab4.5_0002499g0120 Nicotiana tabacum HOM05D002221 ORTHO05D010139 1.7e-06 56.2 40 67.5
Nitab4.5_0007618g0010 Nicotiana tabacum HOM05D002221 ORTHO05D010139 1.7e-06 56.2 40 67.5
Peaxi162Scf00352g01031 Petunia axillaris HOM05D002221 ORTHO05D002626 1.7e-06 56.2 40 67.5
Sabra14G0123100 Salix brachista HOM05D002221 ORTHO05D002626 1.7e-06 56.2 47 57.4
Sopen11g007220 Solanum pennellii HOM05D002221 ORTHO05D002626 1.7e-06 56.2 50 54.0
TAR624G0610 Trochodendron aralioides HOM05D002221 ORTHO05D002626 1.7e-06 56.2 61 49.2
Cc05_g07240 Coffea canephora HOM05D002221 ORTHO05D002626 2.2e-06 55.8 40 67.5
PSO541G4666 Papaver somniferum HOM05D002221 ORTHO05D002626 2.9e-06 55.5 47 57.4
SalBow8G4907 Salvia bowleyana HOM05D002221 ORTHO05D010139 2.9e-06 55.5 40 65.0
EL10Ac8g20226 Beta vulgaris HOM05D002221 ORTHO05D010139 3.7e-06 55.1 50 52.0
COL.COLO4_33034 Corchorus olitorius HOM05D002221 ORTHO05D002626 3.7e-06 55.1 46 56.5
Atru.chr6.3349 Acer truncatum HOM05D002221 ORTHO05D002626 4.9e-06 54.7 40 65.0
MSTRG.7153 Avicennia marina HOM05D002221 ORTHO05D002626 4.9e-06 54.7 40 65.0
MBI16_g11549_MAGBIO Magnolia biondii HOM05D002221 ORTHO05D010139 4.9e-06 54.7 40 65.0
Manes.13G064000 Manihot esculenta HOM05D002221 ORTHO05D002626 4.9e-06 54.7 40 62.5
Potri.002G222300 Populus trichocarpa HOM05D002221 ORTHO05D002626 4.9e-06 54.7 40 62.5
Solyc11g012480.3 Solanum lycopersicum HOM05D002221 ORTHO05D002626 4.9e-06 54.7 40 65.0
TAR626G0475 Trochodendron aralioides HOM05D002221 ORTHO05D002626 4.9e-06 54.7 40 65.0
Ciclev10016471m.g Citrus clementina HOM05D002221 ORTHO05D002626 6.4e-06 54.3 42 59.5
SGA_v2.0_scaffold7G03727 Striga asiatica HOM05D002221 ORTHO05D010139 6.4e-06 54.3 42 61.9
arahy.Tifrunner.gnm1.ann1.DY6AJ3 Arachis hypogaea HOM05D002221 ORTHO05D002626 8.3e-06 53.9 40 65.0
arahy.Tifrunner.gnm1.ann1.E5VA16 Arachis hypogaea HOM05D002221 ORTHO05D002626 8.3e-06 53.9 40 65.0
arahy.Tifrunner.gnm1.ann1.J0AY6V Arachis hypogaea HOM05D002221 ORTHO05D010139 8.3e-06 53.9 46 56.5
arahy.Tifrunner.gnm1.ann1.LWZP2H Arachis hypogaea HOM05D002221 ORTHO05D010139 8.3e-06 53.9 46 56.5
arahy.Tifrunner.gnm1.ann1.Q8BPMD Arachis hypogaea HOM05D002221 ORTHO05D002626 8.3e-06 53.9 40 65.0
Cfa014250 Carpinus fangiana HOM05D002221 ORTHO05D002626 8.3e-06 53.9 40 60.0
Haze_12699 Corylus avellana HOM05D002221 ORTHO05D002626 8.3e-06 53.9 40 60.0
Duzib138G0880 Durio zibethinus HOM05D002221 ORTHO05D002626 8.3e-06 53.9 40 65.0
HanXRQChr11g0328161 Helianthus annuus HOM05D002221 ORTHO05D002626 8.3e-06 53.9 40 60.0
Nn1g02978 Nelumbo nucifera HOM05D002221 ORTHO05D002626 8.3e-06 53.9 40 62.5
PGSC0003DMG400013288 Solanum tuberosum HOM05D002221 ORTHO05D010139 8.3e-06 53.9 40 65.0


User provided reference genes

Program Settings