Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0029451 Helianthus annuus HOM05D000004 ORTHO05D223792 2.2e-38 161.8 78 100.0
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-12 75.1 38 81.6
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-09 65.5 59 50.8
TPR.G22944 Trifolium pratense HOM05D000004 ORTHO05D000002 1.0e-08 63.2 37 75.7
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-08 62.8 40 62.5
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-08 62.4 38 68.4
ECA233G3293 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.3e-08 62.0 41 65.9
ECA234G2434 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-08 61.2 37 73.0
ECA236G3521 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 59.7 38 65.8
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 59.7 38 65.8
ECA246G1748 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 59.7 41 63.4
ECA246G1501 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 58.9 37 70.3
RcHm_v2.0_Chr1g0384471 Rosa chinensis HOM05D000004 ORTHO05D000002 2.6e-07 58.5 37 67.6
ECA246G1944 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-07 58.2 38 65.8
Atru.chr3.1709 Acer truncatum HOM05D000004 ORTHO05D000002 4.4e-07 57.8 37 70.3
Ca_12944_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.8e-07 57.4 37 64.9
THA.LOC104814705 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.8e-07 57.4 37 67.6
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 5.8e-07 57.4 37 64.9
Ca_13975_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.5e-07 57.0 62 45.2
Sopen06g003700 Solanum pennellii HOM05D000004 ORTHO05D000002 7.5e-07 57.0 40 60.0
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 9.8e-07 56.6 37 64.9
BolC9t55624H Brassica oleracea HOM05D000004 ORTHO05D010626 1.3e-06 56.2 37 67.6
THA.LOC104809111 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.3e-06 56.2 37 64.9
VMungo0647G2196 Vigna mungo HOM05D000004 ORTHO05D000002 1.3e-06 56.2 37 62.2
Lalb_Chr18g0058611 Lupinus albus HOM05D000004 ORTHO05D000002 1.7e-06 55.8 37 67.6
Ca_25722_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.2e-06 55.5 37 64.9
ECA233G3359 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-06 55.5 37 67.6
Lalb_Chr12g0204591 Lupinus albus HOM05D000004 ORTHO05D000002 2.2e-06 55.5 37 62.2
RcHm_v2.0_Chr5g0082941 Rosa chinensis HOM05D000004 ORTHO05D000002 2.2e-06 55.5 36 66.7
CANSAT35G0278 Cannabis sativa HOM05D000004 ORTHO05D000002 2.9e-06 55.1 39 61.5
Ca_12307_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.9e-06 55.1 37 67.6
Ca_10095_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.7e-06 54.7 37 59.5
Ca_12127_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.7e-06 54.7 37 62.2
FvH4_2g05351 Fragaria vesca HOM05D000004 ORTHO05D000002 3.7e-06 54.7 36 63.9
Ca_07376_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.9e-06 54.3 37 62.2
ECA233G0504 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.9e-06 54.3 37 64.9
SGA_v2.0_scaffold412G51154 Striga asiatica HOM05D000004 ORTHO05D000002 4.9e-06 54.3 40 52.5
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.4e-06 53.9 37 67.6
Psat6g061160 Pisum sativum HOM05D000004 ORTHO05D000002 6.4e-06 53.9 37 64.9
RcHm_v2.0_Chr6g0250891 Rosa chinensis HOM05D000004 ORTHO05D000002 6.4e-06 53.9 37 62.2
SHI02826 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-06 53.9 37 67.6
SHI10882 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-06 53.9 38 60.5
SHI20451 Sapria himalayana HOM05D000004 ORTHO05D037368 6.4e-06 53.9 39 56.4
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-06 53.9 37 67.6
SHI44756 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-06 53.9 38 60.5
Ca_11979_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.3e-06 53.5 37 59.5
SHI22930 Sapria himalayana HOM05D000004 ORTHO05D000002 8.3e-06 53.5 37 59.5
SHI29615 Sapria himalayana HOM05D000004 ORTHO05D000002 8.3e-06 53.5 37 59.5
VMungo0464G1366 Vigna mungo HOM05D000004 ORTHO05D000002 8.3e-06 53.5 37 62.2


User provided reference genes

Program Settings