Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0028901 Helianthus annuus HOM05D002821 ORTHO05D003072 3.0e-30 134.8 83 100.0
HanXRQChr10g0291181 Helianthus annuus HOM05D002821 ORTHO05D003072 9.4e-16 86.7 90 74.4
HanXRQChr01g0018301 Helianthus annuus HOM05D002821 ORTHO05D003072 5.7e-13 77.4 42 92.9
ECA248G2591 Erigeron canadensis HOM05D002821 ORTHO05D003072 1.7e-12 75.9 52 80.8
Lsat_1_v5_gn_1_65541 Lactuca sativa HOM05D002821 ORTHO05D003072 2.2e-12 75.5 42 92.9
Lj1C188G5 Lonicera japonica HOM05D002821 ORTHO05D003072 1.5e-08 62.8 40 77.5
Glyma.03G180100 Glycine max HOM05D002821 ORTHO05D003072 3.6e-07 58.2 42 69.0
CSS0023677 Camellia sinensis var. sinensis HOM05D002821 ORTHO05D003072 6.1e-07 57.4 64 48.4
Gohir.D09G146200 Gossypium hirsutum HOM05D002821 ORTHO05D003072 1.4e-06 56.2 40 70.0
Gorai.006G167400 Gossypium raimondii HOM05D002821 ORTHO05D003072 1.4e-06 56.2 40 70.0
QL07p044666 Quercus lobata HOM05D002821 ORTHO05D003072 1.4e-06 56.2 42 66.7
CSS0034058 Camellia sinensis var. sinensis HOM05D002821 ORTHO05D003072 1.8e-06 55.8 39 71.8
CSS0042747 Camellia sinensis var. sinensis HOM05D002821 ORTHO05D003072 1.8e-06 55.8 39 71.8
Gohir.A04G074800 Gossypium hirsutum HOM05D002821 ORTHO05D003072 1.8e-06 55.8 40 70.0
Gohir.A09G150500 Gossypium hirsutum HOM05D002821 ORTHO05D003072 1.8e-06 55.8 40 70.0
Gohir.D04G113600 Gossypium hirsutum HOM05D002821 ORTHO05D003072 1.8e-06 55.8 40 70.0
Gorai.009G418400 Gossypium raimondii HOM05D002821 ORTHO05D003072 1.8e-06 55.8 40 70.0
Peaxi162Scf00182g00113 Petunia axillaris HOM05D002821 ORTHO05D003072 1.8e-06 55.8 60 51.7
TAR623G1157 Trochodendron aralioides HOM05D002821 ORTHO05D003072 1.8e-06 55.8 42 66.7
CiPaw.13G110900 Carya illinoinensis HOM05D002821 ORTHO05D003072 2.3e-06 55.5 59 50.8
HanXRQChr01g0027381 Helianthus annuus HOM05D002821 ORTHO05D003072 2.3e-06 55.5 58 53.4
Solyc09g007670.3 Solanum lycopersicum HOM05D002821 ORTHO05D003072 3.0e-06 55.1 85 41.2
arahy.Tifrunner.gnm1.ann1.22I0LH Arachis hypogaea HOM05D002821 ORTHO05D003072 4.0e-06 54.7 40 67.5
arahy.Tifrunner.gnm1.ann1.AE9G4B Arachis hypogaea HOM05D002821 ORTHO05D003072 4.0e-06 54.7 40 67.5
Cc06_g03840 Coffea canephora HOM05D002821 ORTHO05D003072 4.0e-06 54.7 40 67.5
Duzib128G1944 Durio zibethinus HOM05D002821 ORTHO05D003072 4.0e-06 54.7 40 67.5
Lj1g0009239 Lotus japonicus HOM05D002821 ORTHO05D003072 4.0e-06 54.7 40 67.5
Nitab4.5_0005150g0060 Nicotiana tabacum HOM05D002821 ORTHO05D003072 4.0e-06 54.7 41 65.9
TWI74G1325 Tripterygium wilfordii HOM05D002821 ORTHO05D003072 4.0e-06 54.7 40 67.5
VMungo1383G0431 Vigna mungo HOM05D002821 ORTHO05D003072 4.0e-06 54.7 41 65.9
Atru.chr8.1879 Acer truncatum HOM05D002821 ORTHO05D003072 5.2e-06 54.3 40 67.5
Cpa.g.sc226.2 Carica papaya HOM05D002821 ORTHO05D003072 5.2e-06 54.3 40 67.5
Duzib093G0865 Durio zibethinus HOM05D002821 ORTHO05D003072 5.2e-06 54.3 40 67.5
Duzib106G1856 Durio zibethinus HOM05D002821 ORTHO05D003072 5.2e-06 54.3 40 67.5
Glyma.19G180800 Glycine max HOM05D002821 ORTHO05D003072 5.2e-06 54.3 40 67.5
Lalb_Chr01g0018911 Lupinus albus HOM05D002821 ORTHO05D003072 5.2e-06 54.3 42 61.9
MD04G1099900 Malus domestica HOM05D002821 ORTHO05D003072 5.2e-06 54.3 50 54.0
Prupe.6G238200 Prunus persica HOM05D002821 ORTHO05D003072 5.2e-06 54.3 40 67.5
Rhsim01G0218000 Rhododendron simsii HOM05D002821 ORTHO05D003072 5.2e-06 54.3 35 74.3
Thecc.05G057700 Theobroma cacao HOM05D002821 ORTHO05D003072 5.2e-06 54.3 40 67.5
TAR369G0659 Trochodendron aralioides HOM05D002821 ORTHO05D003072 5.2e-06 54.3 40 65.0
Dinv32762 Davidia involucrata HOM05D002821 ORTHO05D003072 6.8e-06 53.9 57 52.6
Manes.09G069301 Manihot esculenta HOM05D002821 ORTHO05D003072 6.8e-06 53.9 52 53.8
Nn2g10752 Nelumbo nucifera HOM05D002821 ORTHO05D003072 6.8e-06 53.9 57 50.9
CAN.G888.12 Capsicum annuum HOM05D002821 ORTHO05D003072 8.8e-06 53.5 40 65.0
Nitab4.5_0000101g0030 Nicotiana tabacum HOM05D002821 ORTHO05D003072 8.8e-06 53.5 41 63.4
Sopen09g002550 Solanum pennellii HOM05D002821 ORTHO05D003072 8.8e-06 53.5 40 65.0
PGSC0003DMG400001755 Solanum tuberosum HOM05D002821 ORTHO05D003072 8.8e-06 53.5 40 65.0


User provided reference genes

Program Settings