Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0028771 Helianthus annuus HOM05D007374 ORTHO05D009283 1.4e-140 503.1 280 100.0
ECA234G2656 Erigeron canadensis HOM05D000461 ORTHO05D001840 8.5e-85 317.8 288 66.7
Lsat_1_v5_gn_4_26980 Lactuca sativa HOM05D007374 ORTHO05D009283 1.5e-73 280.4 267 64.4
HanXRQChr17g0565851 Helianthus annuus HOM05D007374 ORTHO05D009283 2.2e-61 240.0 154 89.0
Nn4g26487 Nelumbo nucifera HOM05D007374 ORTHO05D009283 2.2e-56 223.4 288 49.0
TAR627G0951 Trochodendron aralioides HOM05D007374 ORTHO05D009283 1.1e-55 221.1 285 49.1
QL08p044444 Quercus lobata HOM05D007374 ORTHO05D009283 1.8e-55 220.3 270 50.0
Cfa021554 Carpinus fangiana HOM05D007374 ORTHO05D009283 1.3e-53 214.2 266 49.2
Prupe.3G174200 Prunus persica HOM05D007374 ORTHO05D009283 1.3e-53 214.2 283 47.0
CAN.G2018.2 Capsicum annuum HOM05D007374 ORTHO05D009283 5.0e-53 212.2 261 47.5
MD17G1138200 Malus domestica HOM05D007374 ORTHO05D009283 1.9e-52 210.3 279 49.8
FAN14G0493 Fragaria x ananassa HOM05D007374 ORTHO05D009283 7.2e-52 208.4 278 47.5
FvH4_6g38360 Fragaria vesca HOM05D007374 ORTHO05D009283 2.1e-51 206.8 278 47.1
COL.COLO4_00303 Corchorus olitorius HOM05D007374 ORTHO05D009283 1.8e-50 203.8 285 48.1
Atru.chr6.2078 Acer truncatum HOM05D007374 ORTHO05D009283 2.6e-49 199.9 288 46.5
PGSC0003DMG400021285 Solanum tuberosum HOM05D007374 ORTHO05D009283 3.7e-48 196.1 261 44.8
vmacro01388 Vaccinium macrocarpon HOM05D007374 ORTHO05D009283 6.3e-48 195.3 275 43.6
Nitab4.5_0002209g0060 Nicotiana tabacum HOM05D007374 ORTHO05D009283 1.1e-47 194.5 284 43.7
Dinv02438 Davidia involucrata HOM05D007374 ORTHO05D009283 1.4e-47 194.1 257 48.2
Sopen10g003640 Solanum pennellii HOM05D007374 ORTHO05D009283 2.4e-47 193.4 257 45.1
Solyc10g007730.3 Solanum lycopersicum HOM05D007374 ORTHO05D009283 9.2e-47 191.4 254 46.5
Sed0010749 Sechium edule HOM05D007374 ORTHO05D009283 1.2e-46 191.0 277 43.0
CiPaw.03G190900 Carya illinoinensis HOM05D007374 ORTHO05D009283 3.5e-46 189.5 265 46.4
Gorai.012G040800 Gossypium raimondii HOM05D007374 ORTHO05D009283 5.9e-46 188.7 266 47.0
LjContig00049g0002262 Lotus japonicus HOM05D007374 ORTHO05D009283 5.9e-46 188.7 254 45.3
Rhsim12G0085200 Rhododendron simsii HOM05D007374 ORTHO05D009283 7.8e-46 188.3 262 44.7
Gohir.A05G379500 Gossypium hirsutum HOM05D007374 ORTHO05D009283 1.0e-45 188.0 266 47.0
Migut.M00488 Erythranthe guttata HOM05D007374 ORTHO05D009283 1.3e-45 187.6 275 47.3
FAN09G2358 Fragaria x ananassa HOM05D007374 ORTHO05D009283 1.3e-45 187.6 317 41.0
Glyma.02G285800 Glycine max HOM05D007374 ORTHO05D009283 1.3e-45 187.6 251 45.0
TPR.G12560 Trifolium pratense HOM05D007374 ORTHO05D009283 2.3e-45 186.8 250 46.8
FAN05G2216 Fragaria x ananassa HOM05D007374 ORTHO05D009283 2.9e-45 186.4 317 41.3
BolC5t29248H Brassica oleracea HOM05D007374 ORTHO05D009283 5.0e-45 185.7 277 43.7
Cc05_g09580 Coffea canephora HOM05D007374 ORTHO05D009283 5.0e-45 185.7 268 45.1
PGR042G1022 Punica granatum HOM05D007374 ORTHO05D009283 6.6e-45 185.3 276 44.9
ClCG09G022490 Citrullus lanatus HOM05D007374 ORTHO05D009283 1.1e-44 184.5 262 43.5
Aqoxy4G00135 Aquilegia oxysepala HOM05D007374 ORTHO05D009283 1.5e-44 184.1 297 43.1
Gohir.D04G035900 Gossypium hirsutum HOM05D007374 ORTHO05D009283 1.5e-44 184.1 266 46.2
FAN02G3372 Fragaria x ananassa HOM05D007374 ORTHO05D009283 1.9e-44 183.7 317 41.0
GSVIVG01020866001 Vitis vinifera HOM05D007374 ORTHO05D009283 1.9e-44 183.7 253 47.4
BcaB02g06801 Brassica carinata HOM05D007374 ORTHO05D009283 2.5e-44 183.3 266 44.0
Hund08257 Selenicereus undatus HOM05D007374 ORTHO05D009283 4.3e-44 182.6 256 44.5
Sabra05G0154300 Salix brachista HOM05D007374 ORTHO05D009283 9.5e-44 181.4 269 44.6
RcHm_v2.0_Chr2g0151671 Rosa chinensis HOM05D007374 ORTHO05D009283 1.6e-43 180.6 247 47.0
BraA10t42783Z Brassica rapa HOM05D007374 ORTHO05D009283 2.1e-43 180.3 272 44.1
Lalb_Chr10g0106631 Lupinus albus HOM05D007374 ORTHO05D009283 2.1e-43 180.3 269 43.9
C05p04770 Brassica napus HOM05D007374 ORTHO05D009283 2.8e-43 179.9 272 43.4
Medtr5g091560 Medicago truncatula HOM05D007374 ORTHO05D009283 2.8e-43 179.9 259 45.9
A10p05160 Brassica napus HOM05D007374 ORTHO05D009283 4.7e-43 179.1 272 44.1
Thhalv10009532m.g Eutrema salsugineum HOM05D007374 ORTHO05D009283 4.7e-43 179.1 261 44.1
Lj1A605T43 Lonicera japonica HOM05D007374 ORTHO05D009283 4.7e-43 179.1 232 49.6
Thecc.01G163300 Theobroma cacao HOM05D007374 ORTHO05D009283 4.7e-43 179.1 269 43.1
Haze_13514 Corylus avellana HOM05D007374 ORTHO05D009283 6.1e-43 178.7 228 49.6
Psat2g016160 Pisum sativum HOM05D007374 ORTHO05D009283 8.0e-43 178.3 261 44.8
Ciclev10032166m.g Citrus clementina HOM05D007374 ORTHO05D009283 1.0e-42 177.9 259 45.9
Eucgr.A01989 Eucalyptus grandis HOM05D007374 ORTHO05D009283 1.8e-42 177.2 274 43.1
CsaV3_7G022640 Cucumis sativus L. HOM05D007374 ORTHO05D009283 4.0e-42 176.0 254 43.3
VMungo0647G1819 Vigna mungo HOM05D007374 ORTHO05D009283 4.0e-42 176.0 249 45.0
Cpa.g.sc1195.1 Carica papaya HOM05D007374 ORTHO05D009283 6.8e-42 175.3 292 40.8
MELO3C012638.2 Cucumis melo HOM05D007374 ORTHO05D009283 6.8e-42 175.3 253 42.7
Sp1g05270 Schrenkiella parvula HOM05D007374 ORTHO05D009283 1.2e-41 174.5 259 42.5
Carub.0001s0588 Capsella rubella HOM05D007374 ORTHO05D009283 1.5e-41 174.1 255 42.4
arahy.Tifrunner.gnm1.ann1.PL1TQM Arachis hypogaea HOM05D007374 ORTHO05D009283 3.4e-41 172.9 245 44.9
Glyma.14G028800 Glycine max HOM05D007374 ORTHO05D009283 1.3e-40 171.0 252 44.0
Potri.005G203100 Populus trichocarpa HOM05D007374 ORTHO05D009283 1.3e-40 171.0 270 43.3
arahy.Tifrunner.gnm1.ann1.G50Y2D Arachis hypogaea HOM05D007374 ORTHO05D009283 1.7e-40 170.6 285 42.1
DCAR_009800 Daucus carota HOM05D007374 ORTHO05D009283 2.9e-40 169.9 270 44.1
AL1G16540 Arabidopsis lyrata HOM05D007374 ORTHO05D009283 3.7e-40 169.5 255 43.1
Phvul.008G231728 Phaseolus vulgaris HOM05D007374 ORTHO05D009283 3.7e-40 169.5 249 43.0
AUR62015143 Chenopodium quinoa HOM05D007374 ORTHO05D009283 8.3e-40 168.3 257 44.7
AUR62017602 Chenopodium quinoa HOM05D007374 ORTHO05D009283 1.4e-39 167.5 257 45.5
Ca_30616_v3 Cicer arietinum L. HOM05D007374 ORTHO05D009283 2.4e-39 166.8 232 47.8
AT1G06510 Arabidopsis thaliana HOM05D007374 ORTHO05D009283 9.2e-39 164.9 260 41.9
Oeu005608.1 Olea europaea HOM05D007374 ORTHO05D009283 1.6e-38 164.1 240 44.2
Ah.01g013460 Amaranthus hybridus HOM05D007374 ORTHO05D009283 3.5e-38 162.9 242 45.9
Peaxi162Scf00035g00262 Petunia axillaris HOM05D007374 ORTHO05D009283 1.0e-37 161.4 290 40.3
SGA_v2.0_scaffold70G23631 Striga asiatica HOM05D007374 ORTHO05D009283 1.5e-36 157.5 252 42.9
HPP92_024591 Vanilla planifolia HOM05D007374 ORTHO05D009283 1.5e-36 157.5 243 42.8
EL10Ac9g22854 Beta vulgaris HOM05D007374 ORTHO05D009283 3.3e-36 156.4 265 42.6
BcaC04g23554 Brassica carinata HOM05D007374 ORTHO05D009283 2.1e-35 153.7 268 40.3
CDE02G0809 Ceratophyllum demersum HOM05D007374 ORTHO05D009283 1.4e-34 151.0 250 41.6
HPP92_024519 Vanilla planifolia HOM05D007374 ORTHO05D009283 6.8e-34 148.7 247 41.7
HanXRQChr14g0433321 Helianthus annuus HOM05D007374 ORTHO05D009283 6.4e-32 142.1 83 97.6
Aa31LG1G7610 Aethionema arabicum HOM05D007374 ORTHO05D009283 1.1e-31 141.4 249 39.4
Ca_06277_v3 Cicer arietinum L. HOM05D007374 ORTHO05D009283 1.2e-30 137.9 203 45.8
Nitab4.5_0003104g0030 Nicotiana tabacum HOM05D007374 ORTHO05D009283 5.1e-29 132.5 191 45.5
MSTRG.15040 Avicennia marina HOM05D007374 ORTHO05D009283 1.1e-26 124.8 276 37.0
LjContig00141g0020215 Lotus japonicus HOM05D007374 ORTHO05D009283 1.1e-26 124.8 241 37.8
unitig_746.g26685 Utricularia gibba HOM05D002434 ORTHO05D002743 1.3e-24 117.9 208 40.4
QL08p044527 Quercus lobata HOM05D007374 ORTHO05D009283 1.9e-23 114.0 94 66.0
CDE09G1208 Ceratophyllum demersum HOM05D007374 ORTHO05D009283 4.1e-23 112.8 265 34.0
MD09G1150800 Malus domestica HOM05D007374 ORTHO05D009283 4.6e-22 109.4 149 49.0
Os01g0696000 Oryza sativa ssp. japonica HOM05D007374 ORTHO05D009283 3.9e-21 106.3 247 36.4
Actinidia00867 Actinidia chinensis HOM05D007374 ORTHO05D009283 1.9e-20 104.0 85 68.2
Sc06g0007570 Simmondsia chinensis HOM05D007374 ORTHO05D009283 8.1e-19 98.6 182 37.4
SalBow8G1446 Salvia bowleyana HOM05D007374 ORTHO05D009283 1.1e-18 98.2 99 58.6
Zm00001eb155870 Zea mays HOM05D007374 ORTHO05D009283 4.0e-18 96.3 247 31.2
Pp3c6_23840 Physcomitrium patens HOM05D007374 ORTHO05D009283 5.8e-17 92.4 104 51.0
Hma1.2p1_0081F.1_g042230 Hydrangea macrophylla HOM05D007374 ORTHO05D009283 6.4e-16 89.0 76 64.5
CARHR006130 Cardamine hirsuta HOM05D007374 ORTHO05D009283 1.7e-13 80.9 164 32.9
QL08p044531 Quercus lobata HOM05D007374 ORTHO05D009283 4.8e-11 72.8 102 40.2
Mapoly0086s0079 Marchantia polymorpha HOM05D007374 ORTHO05D009283 2.6e-09 67.0 157 38.2
CBR_g17125 Chara braunii HOM05D007374 ORTHO05D009283 6.4e-08 62.4 105 35.2
Actinidia00868 Actinidia chinensis HOM05D007374 ORTHO05D009283 1.1e-07 61.6 66 39.4
SEGI_29023 Sequoiadendron giganteum HOM05D007374 ORTHO05D009283 1.9e-07 60.8 172 36.0


User provided reference genes

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