Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 5.1e-148 527.7 263 100.0
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 3.1e-89 332.4 266 66.5
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 1.4e-81 307.0 265 63.0
HanXRQChr17g0565881 Helianthus annuus HOM05D007438 ORTHO05D009395 1.2e-48 197.6 161 64.6
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 1.0e-47 194.5 271 43.9
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 2.3e-47 193.4 270 42.6
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 3.0e-47 193.0 273 43.6
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 2.1e-45 186.8 274 41.6
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 3.6e-45 186.0 271 42.8
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 4.7e-45 185.7 272 41.5
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 6.2e-45 185.3 272 43.8
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 8.1e-45 184.9 275 42.9
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 1.8e-44 183.7 269 41.3
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 2.3e-44 183.3 271 42.1
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 6.8e-44 181.8 270 43.3
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 3.4e-43 179.5 270 43.0
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 4.4e-43 179.1 277 41.9
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 5.8e-43 178.7 273 40.7
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 1.7e-42 177.2 280 41.8
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 2.9e-42 176.4 270 41.9
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 4.9e-42 175.6 269 42.8
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 1.4e-41 174.1 268 40.7
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 1.4e-41 174.1 285 40.4
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 1.4e-41 174.1 273 40.7
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 5.4e-41 172.2 272 37.9
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 5.4e-41 172.2 278 40.6
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 1.6e-40 170.6 287 40.1
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 1.6e-40 170.6 287 40.1
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 2.1e-40 170.2 268 42.2
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 7.8e-40 168.3 268 39.2
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 2.3e-39 166.8 270 40.0
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 2.3e-39 166.8 262 40.1
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 3.0e-39 166.4 267 41.6
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 1.5e-38 164.1 257 38.9
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 1.5e-38 164.1 264 40.9
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 1.9e-38 163.7 269 41.6
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 5.6e-38 162.2 315 35.6
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 5.6e-38 162.2 273 41.8
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 2.8e-37 159.8 270 36.3
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 8.1e-37 158.3 284 37.0
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 5.2e-36 155.6 270 39.3
Carub.0001s0582 Capsella rubella HOM05D007438 ORTHO05D009395 8.9e-36 154.8 297 36.7
CARHR006070 Cardamine hirsuta HOM05D007438 ORTHO05D009395 8.9e-36 154.8 289 38.4
AT1G06460 Arabidopsis thaliana HOM05D007438 ORTHO05D009395 1.5e-35 154.1 299 37.5
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 4.4e-35 152.5 269 38.3
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 5.8e-35 152.1 280 37.5
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 7.6e-35 151.8 269 35.7
A10p05120 Brassica napus HOM05D007438 ORTHO05D009395 9.9e-35 151.4 296 36.5
BraA10t42777Z Brassica rapa HOM05D007438 ORTHO05D009395 1.3e-34 151.0 305 35.7
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 1.7e-34 150.6 279 36.2
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 1.7e-34 150.6 267 37.8
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 3.8e-34 149.4 270 36.7
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 4.9e-34 149.1 306 34.6
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 4.9e-34 149.1 271 35.4
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 8.4e-34 148.3 269 35.3
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 8.4e-34 148.3 267 37.5
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 1.1e-33 147.9 259 39.8
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 1.4e-33 147.5 269 34.9
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 1.4e-33 147.5 253 37.9
Sp1g05220 Schrenkiella parvula HOM05D007438 ORTHO05D009395 2.4e-33 146.7 309 36.6
AL1G16470 Arabidopsis lyrata HOM05D007438 ORTHO05D009395 3.2e-33 146.4 310 34.8
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 4.1e-33 146.0 290 35.9
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 5.4e-33 145.6 314 32.5
C05p04710 Brassica napus HOM05D007438 ORTHO05D009395 2.1e-32 143.7 293 34.8
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 4.6e-32 142.5 259 37.8
BolC5t29243H Brassica oleracea HOM05D007438 ORTHO05D009395 1.3e-31 141.0 303 34.3
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 3.9e-31 139.4 282 36.2
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 3.9e-31 139.4 266 36.5
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 8.7e-31 138.3 254 37.8
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 1.5e-30 137.5 301 33.9
Hund07732 Selenicereus undatus HOM05D007438 ORTHO05D009395 1.9e-30 137.1 288 35.1
BcaB02g06796 Brassica carinata HOM05D007438 ORTHO05D009395 1.2e-29 134.4 286 33.9
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 1.6e-29 134.0 284 33.5
Aa31LG1G7510 Aethionema arabicum HOM05D007438 ORTHO05D009395 2.1e-29 133.7 307 35.2
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 2.8e-29 133.3 269 34.9
Prupe.3G108500 Prunus persica HOM05D007438 ORTHO05D009395 6.2e-29 132.1 219 38.4
Phvul.008G264700 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 8.1e-29 131.7 281 34.2
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 1.1e-28 131.3 291 34.0
BraA08t35504Z Brassica rapa HOM05D007438 ORTHO05D009395 5.2e-28 129.0 282 35.1
Thhalv10008353m.g Eutrema salsugineum HOM05D007438 ORTHO05D009395 9.0e-28 128.3 238 38.7
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 1.2e-27 127.9 262 35.5
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 2.2e-26 123.6 278 32.0
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 1.1e-25 121.3 272 34.6
BolC8t47053H Brassica oleracea HOM05D007438 ORTHO05D009395 3.5e-24 116.3 274 33.2
THA.LOC104800831 Tarenaya hassleriana HOM05D007438 ORTHO05D009395 1.3e-23 114.4 261 32.6
C08p02600 Brassica napus HOM05D007438 ORTHO05D009395 1.1e-22 111.3 269 33.5
BcaB03g13417 Brassica carinata HOM05D000181 ORTHO05D002783 1.9e-22 110.5 269 34.6
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 2.5e-22 110.2 212 35.4
HPP92_021771 Vanilla planifolia HOM05D007438 ORTHO05D009395 5.6e-22 109.0 269 31.6
Nitab4.5_0011473g0010 Nicotiana tabacum HOM05D007438 ORTHO05D009395 4.8e-21 105.9 216 35.6
arahy.Tifrunner.gnm1.ann1.AN6F3M Arachis hypogaea HOM05D007438 ORTHO05D009395 8.1e-21 105.1 206 36.9
Sc21g0004330 Simmondsia chinensis HOM05D007438 ORTHO05D009395 5.8e-19 99.0 102 47.1
Nitab4.5_0005259g0040 Nicotiana tabacum HOM05D007438 ORTHO05D009395 7.6e-19 98.6 231 33.8
A08p35960 Brassica napus HOM05D007438 ORTHO05D009395 1.6e-16 90.9 91 52.7
Sc21g0004320 Simmondsia chinensis HOM05D007438 ORTHO05D009395 2.3e-15 87.0 158 40.5
arahy.Tifrunner.gnm1.ann1.28WURV Arachis hypogaea HOM05D007438 ORTHO05D009395 3.0e-15 86.7 89 51.7
SMO111G0151 Selaginella moellendorffii HOM05D007438 ORTHO05D009395 3.0e-15 86.7 281 27.4
ATR0127G021 Amborella trichopoda HOM05D007438 ORTHO05D009395 9.6e-14 81.6 222 31.5
Mapoly0109s0048 Marchantia polymorpha HOM05D007438 ORTHO05D009395 1.1e-12 78.2 309 24.6
BcaC07g36810 Brassica carinata HOM05D000181 ORTHO05D002783 7.6e-11 72.0 201 35.3
Phvul.003G195300 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 4.9e-10 69.3 113 39.8
SalBow8G2019 Salvia bowleyana HOM05D007438 ORTHO05D009395 7.1e-09 65.5 118 36.4
CiPaw.15G088300 Carya illinoinensis HOM05D000136 ORTHO05D000080 2.5e-06 57.0 125 29.6
Aa31LG10G1370 Aethionema arabicum HOM05D000136 ORTHO05D000080 4.3e-06 56.2 118 33.1
Lj1g0022257 Lotus japonicus HOM05D000136 ORTHO05D000080 4.3e-06 56.2 106 32.1
Nitab4.5_0009148g0010 Nicotiana tabacum HOM05D000136 ORTHO05D000080 7.4e-06 55.5 95 31.6
Aqoxy7G01116 Aquilegia oxysepala HOM05D000136 ORTHO05D000080 9.6e-06 55.1 116 30.2


User provided reference genes

Program Settings