Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 7.2e-119 430.6 225 100.0
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 1.3e-67 260.4 236 58.9
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 4.2e-50 202.2 254 48.0
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 1.8e-48 196.8 218 50.5
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 1.6e-46 190.3 240 46.2
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 1.2e-44 184.1 231 47.2
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 6.5e-43 178.3 247 46.6
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 1.2e-36 157.5 134 62.7
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 5.0e-35 152.1 245 38.0
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 8.4e-35 151.4 234 41.5
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 1.1e-34 151.0 245 37.6
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 3.5e-33 146.0 239 37.2
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 4.6e-33 145.6 250 39.2
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 5.1e-32 142.1 241 39.0
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 8.7e-32 141.4 243 37.4
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 1.9e-31 140.2 241 36.9
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 1.9e-31 140.2 245 37.6
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 2.8e-30 136.3 245 37.1
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 6.3e-30 135.2 226 38.5
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.1e-29 134.4 241 37.8
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 1.1e-29 134.4 239 37.7
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.4e-29 134.0 234 36.3
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.4e-29 134.0 208 37.5
ECA233G1347 Erigeron canadensis HOM05D007097 ORTHO05D008131 4.1e-29 132.5 218 34.9
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 9.0e-29 131.3 267 35.2
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.2e-28 131.0 233 35.2
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 3.4e-28 129.4 224 39.3
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 5.9e-28 128.6 234 35.5
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.9e-28 128.6 234 35.5
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 7.7e-28 128.3 232 34.9
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 1.3e-27 127.5 268 34.7
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 2.2e-27 126.7 238 39.5
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 2.2e-27 126.7 258 34.5
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 6.5e-27 125.2 223 38.6
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 1.9e-26 123.6 238 36.6
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 2.5e-26 123.2 256 34.8
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 3.2e-26 122.9 250 35.6
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 4.2e-26 122.5 215 39.1
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.1e-25 120.2 233 33.0
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.1e-25 120.2 253 34.8
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 6.1e-25 118.6 237 35.4
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 1.8e-24 117.1 239 32.6
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 3.0e-24 116.3 239 32.2
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 3.9e-24 115.9 217 35.0
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 2.0e-23 113.6 209 36.4
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 2.0e-23 113.6 239 31.8
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 2.0e-23 113.6 242 35.5
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 2.0e-23 113.6 198 36.4
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 2.5e-23 113.2 228 32.0
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 1.3e-22 110.9 210 34.3
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 1.7e-22 110.5 239 33.1
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 3.7e-22 109.4 249 31.7
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.8e-21 107.1 126 46.8
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 5.3e-21 105.5 207 34.8
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 5.3e-21 105.5 249 28.5
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 6.9e-21 105.1 246 32.5
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 1.2e-20 104.4 255 30.6
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 5.9e-20 102.1 250 30.0
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 1.3e-19 100.9 234 32.5
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 5.0e-19 99.0 212 32.5
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 6.5e-19 98.6 248 29.4
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 8.5e-19 98.2 248 29.4
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 1.1e-18 97.8 238 32.4
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 4.2e-18 95.9 253 30.4
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 4.2e-18 95.9 220 30.9
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 5.5e-18 95.5 256 28.9
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 5.5e-18 95.5 227 30.4
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 9.4e-18 94.7 215 34.0
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.2e-17 94.4 256 28.5
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.6e-17 94.0 240 29.2
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 2.7e-17 93.2 245 29.4
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 1.0e-16 91.3 229 32.3
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 1.4e-16 90.9 115 42.6
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 8.8e-16 88.2 236 32.6
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 1.1e-15 87.8 237 30.8
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.6e-15 86.7 109 44.0
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 2.2e-14 83.6 241 29.0
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 6.3e-14 82.0 223 31.4
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 3.1e-13 79.7 222 30.2
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 7.0e-13 78.6 225 31.6
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 1.2e-12 77.8 220 30.9
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 2.0e-12 77.0 226 31.4
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 7.7e-12 75.1 232 29.3
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 1.7e-11 73.9 213 30.5
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.7e-11 73.9 106 41.5
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 3.8e-11 72.8 227 31.3
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 5.0e-11 72.4 229 31.4
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 6.5e-11 72.0 255 29.0
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 1.1e-10 71.2 227 28.6
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 4.2e-10 69.3 231 30.3
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 5.5e-10 68.9 217 29.5
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 2.1e-09 67.0 100 37.0
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 6.1e-09 65.5 99 35.4
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 6.1e-09 65.5 99 32.3
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 8.0e-09 65.1 259 26.6
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 1.8e-08 63.9 219 26.9
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 1.8e-08 63.9 269 24.2
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 2.3e-08 63.5 224 23.7
ECA233G5218 Erigeron canadensis HOM05D067851 ORTHO05D008131 8.8e-08 61.6 73 41.1
ECA233G3888 Erigeron canadensis HOM05D067851 ORTHO05D008131 1.3e-06 57.8 73 38.4
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 4.8e-06 55.8 100 38.0
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 6.3e-06 55.5 114 33.3
Medtr1g057590 Medicago truncatula HOM05D007097 ORTHO05D008131 8.2e-06 55.1 47 55.3


User provided reference genes

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