Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0024921 Helianthus annuus HOM05D000125 ORTHO05D000120 5.2e-175 617.5 280 100.0
HanXRQChr01g0025291 Helianthus annuus HOM05D000125 ORTHO05D000120 1.1e-89 334.0 150 99.3
HanXRQChr02g0054591 Helianthus annuus HOM05D000125 ORTHO05D000120 5.0e-85 318.5 280 56.8
HanXRQChr05g0132781 Helianthus annuus HOM05D000125 ORTHO05D000120 1.1e-84 317.4 289 57.1
HanXRQChr02g0054741 Helianthus annuus HOM05D000125 ORTHO05D000120 2.5e-84 316.2 278 56.8
HanXRQChr05g0132221 Helianthus annuus HOM05D000125 ORTHO05D000120 4.7e-83 312.0 272 60.3
HanXRQChr02g0054421 Helianthus annuus HOM05D000125 ORTHO05D000120 7.4e-81 304.7 268 55.6
HanXRQChr02g0054671 Helianthus annuus HOM05D000125 ORTHO05D000120 9.7e-81 304.3 277 56.3
HanXRQChr02g0054461 Helianthus annuus HOM05D000125 ORTHO05D000120 3.3e-73 279.3 231 58.4
HanXRQChr02g0054441 Helianthus annuus HOM05D000125 ORTHO05D000120 1.6e-70 270.4 276 51.8
HanXRQChr02g0054391 Helianthus annuus HOM05D000125 ORTHO05D000120 3.0e-66 256.1 234 54.7
Lsat_1_v5_gn_2_22961 Lactuca sativa HOM05D000125 ORTHO05D000120 4.4e-65 252.3 294 44.2
Lsat_1_v5_gn_8_80460 Lactuca sativa HOM05D000125 ORTHO05D000120 4.0e-58 229.2 212 49.5
Lsat_1_v5_gn_8_81081 Lactuca sativa HOM05D000125 ORTHO05D000120 8.8e-58 228.0 269 44.6
Lsat_1_v5_gn_8_80280 Lactuca sativa HOM05D000125 ORTHO05D000120 3.4e-57 226.1 272 44.1
HanXRQChr12g0358641 Helianthus annuus HOM05D000125 ORTHO05D000120 3.7e-56 222.6 275 42.9
HanXRQChr16g0499101 Helianthus annuus HOM05D000125 ORTHO05D000120 1.1e-55 221.1 287 44.3
HanXRQChr16g0499071 Helianthus annuus HOM05D000125 ORTHO05D000120 7.0e-55 218.4 279 45.2
HanXRQChr02g0054611 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-54 217.6 143 70.6
Lsat_1_v5_gn_8_81021 Lactuca sativa HOM05D000125 ORTHO05D000120 1.3e-53 214.2 269 43.1
HanXRQChr12g0358931 Helianthus annuus HOM05D000125 ORTHO05D000120 2.9e-53 213.0 275 44.4
HanXRQChr17g0551181 Helianthus annuus HOM05D000125 ORTHO05D000120 2.9e-53 213.0 270 43.7
Lsat_1_v5_gn_8_81380 Lactuca sativa HOM05D000125 ORTHO05D000120 5.0e-53 212.2 271 42.8
HanXRQChr08g0209771 Helianthus annuus HOM05D000125 ORTHO05D000120 6.6e-53 211.8 267 44.2
HanXRQChr09g0245281 Helianthus annuus HOM05D000125 ORTHO05D000120 1.9e-52 210.3 281 42.3
HanXRQChr12g0358621 Helianthus annuus HOM05D000125 ORTHO05D000120 3.3e-52 209.5 275 41.8
HanXRQChr16g0499231 Helianthus annuus HOM05D000125 ORTHO05D000120 4.2e-52 209.1 287 42.2
HanXRQChr16g0499221 Helianthus annuus HOM05D000125 ORTHO05D000120 5.5e-52 208.8 277 44.0
Lsat_1_v5_gn_8_80121 Lactuca sativa HOM05D000125 ORTHO05D000120 1.6e-51 207.2 239 46.4
Lsat_1_v5_gn_8_80160 Lactuca sativa HOM05D000125 ORTHO05D000120 1.6e-51 207.2 236 42.8
HanXRQChr16g0498981 Helianthus annuus HOM05D000125 ORTHO05D000120 2.1e-51 206.8 286 41.3
HanXRQChr12g0358871 Helianthus annuus HOM05D000125 ORTHO05D000120 3.6e-51 206.1 270 42.6
HanXRQChr16g0499091 Helianthus annuus HOM05D000125 ORTHO05D000120 3.6e-51 206.1 286 41.3
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 4.7e-51 205.7 244 43.9
HanXRQChr08g0209911 Helianthus annuus HOM05D000125 ORTHO05D000120 8.0e-51 204.9 267 41.9
HanXRQChr16g0499181 Helianthus annuus HOM05D000125 ORTHO05D000120 8.0e-51 204.9 280 41.4
HanXRQChr16g0499201 Helianthus annuus HOM05D000125 ORTHO05D000120 3.0e-50 203.0 287 41.8
HanXRQChr16g0498831 Helianthus annuus HOM05D000125 ORTHO05D000120 4.0e-50 202.6 292 39.7
HanXRQChr12g0358891 Helianthus annuus HOM05D000125 ORTHO05D000120 8.9e-50 201.4 270 41.1
Lsat_1_v5_gn_9_31861 Lactuca sativa HOM05D000125 ORTHO05D000120 1.2e-49 201.1 281 39.1
HanXRQChr08g0209941 Helianthus annuus HOM05D000125 ORTHO05D000120 5.7e-49 198.7 268 42.9
HanXRQChr08g0209921 Helianthus annuus HOM05D000125 ORTHO05D000120 2.2e-48 196.8 271 43.2
HanXRQChr05g0131841 Helianthus annuus HOM05D000125 ORTHO05D000120 3.7e-48 196.1 271 39.9
HanXRQChr09g0267461 Helianthus annuus HOM05D000125 ORTHO05D000120 2.4e-47 193.4 279 40.5
HanXRQChr12g0358991 Helianthus annuus HOM05D000125 ORTHO05D000120 3.2e-47 193.0 273 41.0
HanXRQChr12g0359001 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-46 191.0 279 40.9
HanXRQChr12g0355681 Helianthus annuus HOM05D000125 ORTHO05D000120 2.7e-46 189.9 269 38.3
HanXRQChr09g0267471 Helianthus annuus HOM05D000125 ORTHO05D000120 3.5e-46 189.5 275 41.1
Lsat_1_v5_gn_9_32180 Lactuca sativa HOM05D000125 ORTHO05D000120 3.5e-46 189.5 291 38.8
HanXRQChr09g0261061 Helianthus annuus HOM05D000125 ORTHO05D000120 4.6e-46 189.1 276 39.1
HanXRQChr14g0430571 Helianthus annuus HOM05D000125 ORTHO05D000120 1.7e-45 187.2 268 39.9
HanXRQChr04g0096141 Helianthus annuus HOM05D000125 ORTHO05D000120 6.6e-45 185.3 272 40.4
HanXRQChr15g0467131 Helianthus annuus HOM05D000125 ORTHO05D000120 6.6e-45 185.3 273 39.9
HanXRQChr05g0131791 Helianthus annuus HOM05D000125 ORTHO05D000807 1.5e-44 184.1 277 39.4
HanXRQChr15g0467181 Helianthus annuus HOM05D000125 ORTHO05D000120 1.5e-44 184.1 272 39.3
HanXRQChr13g0410771 Helianthus annuus HOM05D000125 ORTHO05D000120 1.9e-44 183.7 266 40.2
HanXRQChr05g0131811 Helianthus annuus HOM05D000125 ORTHO05D000120 2.5e-44 183.3 272 39.7
HanXRQChr13g0417501 Helianthus annuus HOM05D000125 ORTHO05D000120 2.5e-44 183.3 277 39.0
HanXRQChr10g0313721 Helianthus annuus HOM05D000125 ORTHO05D000120 5.6e-44 182.2 221 43.4
HanXRQChr13g0409971 Helianthus annuus HOM05D000125 ORTHO05D000120 7.3e-44 181.8 294 37.1
HanXRQChr14g0430601 Helianthus annuus HOM05D000125 ORTHO05D000120 7.3e-44 181.8 273 41.0
HanXRQChr12g0356751 Helianthus annuus HOM05D000125 ORTHO05D000120 2.1e-43 180.3 276 38.8
HanXRQChr09g0261141 Helianthus annuus HOM05D000125 ORTHO05D000120 2.8e-43 179.9 281 38.1
HanXRQChr05g0131831 Helianthus annuus HOM05D000125 ORTHO05D000120 3.6e-43 179.5 272 38.2
HanXRQChr13g0410801 Helianthus annuus HOM05D000125 ORTHO05D000120 4.7e-43 179.1 226 41.2
HanXRQChr05g0144911 Helianthus annuus HOM05D000125 ORTHO05D000120 1.0e-42 177.9 302 37.7
HanXRQChr09g0261071 Helianthus annuus HOM05D000125 ORTHO05D000120 3.1e-42 176.4 220 42.3
HanXRQChr09g0261051 Helianthus annuus HOM05D000125 ORTHO05D000120 1.5e-41 174.1 274 38.0
HanXRQChr05g0131481 Helianthus annuus HOM05D000125 ORTHO05D000120 2.0e-41 173.7 268 36.2
HanXRQChr16g0499041 Helianthus annuus HOM05D000125 ORTHO05D000120 3.4e-41 172.9 172 50.0
HanXRQChr12g0358611 Helianthus annuus HOM05D000125 ORTHO05D000120 4.4e-41 172.6 273 38.1
HanXRQChr12g0356731 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-38 164.5 278 37.8
Lsat_1_v5_gn_8_114160 Lactuca sativa HOM05D000125 ORTHO05D000120 1.6e-38 164.1 131 55.0
HanXRQChr04g0096151 Helianthus annuus HOM05D000125 ORTHO05D000120 2.0e-38 163.7 277 38.3
ECA247G3786 Erigeron canadensis HOM05D001116 ORTHO05D001028 3.5e-38 162.9 238 38.7
HanXRQChr09g0261121 Helianthus annuus HOM05D000125 ORTHO05D000120 1.0e-37 161.4 136 55.1
HanXRQChr16g0499011 Helianthus annuus HOM05D000125 ORTHO05D000120 1.7e-37 160.6 138 54.3
ECA247G0507 Erigeron canadensis HOM05D000125 ORTHO05D000120 1.5e-36 157.5 285 33.3
ECA247G2159 Erigeron canadensis HOM05D000125 ORTHO05D000120 9.5e-36 154.8 240 37.5
HanXRQChr08g0209881 Helianthus annuus HOM05D000125 ORTHO05D000120 9.5e-36 154.8 168 45.8
Lj2P391T11 Lonicera japonica HOM05D000125 ORTHO05D000807 9.2e-31 138.3 223 37.7
HanXRQChr14g0430591 Helianthus annuus HOM05D000125 ORTHO05D000120 1.3e-29 134.4 212 39.6
HanXRQChr16g0499051 Helianthus annuus HOM05D000125 ORTHO05D000120 1.1e-28 131.3 87 65.5
Dinv39597 Davidia involucrata HOM05D000125 ORTHO05D000120 3.1e-26 123.2 273 32.2
HanXRQChr05g0131801 Helianthus annuus HOM05D000125 ORTHO05D000120 3.1e-26 123.2 135 47.4
HanXRQChr05g0131821 Helianthus annuus HOM05D000125 ORTHO05D000120 3.1e-26 123.2 135 47.4
Lj1A359T19 Lonicera japonica HOM05D000125 ORTHO05D000120 5.2e-26 122.5 262 35.1
Lj2C375T1 Lonicera japonica HOM05D000125 ORTHO05D000120 4.9e-24 115.9 263 33.8
HanXRQChr07g0200341 Helianthus annuus HOM05D000125 ORTHO05D000120 8.4e-24 115.2 217 36.4
Lj1A249T14 Lonicera japonica HOM05D000125 ORTHO05D000120 1.9e-23 114.0 269 31.6
Dinv12476 Davidia involucrata HOM05D000125 ORTHO05D000120 5.4e-23 112.5 218 33.5
Lj2A376T20 Lonicera japonica HOM05D000125 ORTHO05D000807 2.3e-21 107.1 212 33.5
Lj1A248G20 Lonicera japonica HOM05D000125 ORTHO05D000807 3.3e-20 103.2 262 30.2
Actinidia09357 Actinidia chinensis HOM05D000125 ORTHO05D000120 9.6e-20 101.7 233 31.3
Lj1A250T9 Lonicera japonica HOM05D000125 ORTHO05D000120 1.2e-19 101.3 223 31.4
DCAR_008092 Daucus carota HOM05D000125 ORTHO05D000120 1.6e-19 100.9 267 30.0
Actinidia39190 Actinidia chinensis HOM05D000125 ORTHO05D000120 2.1e-19 100.5 208 31.2
HanXRQChr16g0499191 Helianthus annuus HOM05D000125 ORTHO05D000120 2.8e-19 100.1 101 47.5
Rhsim03G0013800 Rhododendron simsii HOM05D000125 ORTHO05D000120 1.8e-18 97.4 276 29.7
Lsat_1_v5_gn_2_82381 Lactuca sativa HOM05D000125 ORTHO05D000120 6.8e-18 95.5 285 29.5
Lj1C273T1 Lonicera japonica HOM05D000125 ORTHO05D000120 2.0e-17 94.0 262 28.6
Lj2A865T14 Lonicera japonica HOM05D000125 ORTHO05D000120 1.3e-16 91.3 275 29.8
HanXRQChr01g0026461 Helianthus annuus HOM05D000125 ORTHO05D000807 3.8e-16 89.7 161 36.6
Lj1A1122G41 Lonicera japonica HOM05D000125 ORTHO05D000120 1.4e-15 87.8 206 31.1
Lj2P391T10 Lonicera japonica HOM05D000125 ORTHO05D000807 4.2e-15 86.3 183 31.1
DCAR_012120 Daucus carota HOM05D000125 ORTHO05D000120 5.4e-15 85.9 243 28.8
SalBow2G1034 Salvia bowleyana HOM05D000125 ORTHO05D000120 7.1e-15 85.5 248 25.8
Actinidia39188 Actinidia chinensis HOM05D000125 ORTHO05D000120 1.2e-14 84.7 204 28.4
Lsat_1_v5_gn_2_82461 Lactuca sativa HOM05D000125 ORTHO05D000120 1.6e-14 84.3 140 36.4
CSS0022579 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 3.5e-14 83.2 227 29.5
DCAR_012122 Daucus carota HOM05D000125 ORTHO05D000120 3.0e-13 80.1 239 28.9
Cc00_g25320 Coffea canephora HOM05D000125 ORTHO05D000807 6.6e-13 79.0 266 28.6
Migut.B01383 Erythranthe guttata HOM05D000125 ORTHO05D000807 1.5e-12 77.8 197 29.9
DCAR_011393 Daucus carota HOM05D000125 ORTHO05D000120 2.5e-12 77.0 211 28.4
Nn7g36002 Nelumbo nucifera HOM05D000125 ORTHO05D000807 2.8e-11 73.6 134 34.3
QL03p007034 Quercus lobata HOM05D000125 ORTHO05D000120 8.1e-11 72.0 245 26.5
Haze_19311 Corylus avellana HOM05D000125 ORTHO05D000120 1.1e-10 71.6 210 29.0
Lsat_1_v5_gn_9_26160 Lactuca sativa HOM05D000125 ORTHO05D000807 1.8e-10 70.9 136 33.8
DCAR_008299 Daucus carota HOM05D000125 ORTHO05D000120 2.4e-10 70.5 126 31.0
Migut.B01349 Erythranthe guttata HOM05D000125 ORTHO05D000807 2.4e-10 70.5 182 25.8
PGR004G0421 Punica granatum HOM05D000125 ORTHO05D000120 2.4e-10 70.5 235 28.9
QL03p007988 Quercus lobata HOM05D000125 ORTHO05D000120 3.1e-10 70.1 215 28.4
Rhsim01G0074100 Rhododendron simsii HOM05D000125 ORTHO05D000120 3.1e-10 70.1 170 30.0
DCAR_015708 Daucus carota HOM05D000125 ORTHO05D000807 4.0e-10 69.7 153 31.4
Peaxi162Scf00319g00072 Petunia axillaris HOM05D000125 ORTHO05D000807 4.0e-10 69.7 187 28.9
Cpa.g.sc12.41 Carica papaya HOM05D000125 ORTHO05D000120 5.3e-10 69.3 225 27.1
PGR004G2726 Punica granatum HOM05D000125 ORTHO05D000120 6.9e-10 68.9 217 26.7
Ciclev10013549m.g Citrus clementina HOM05D000125 ORTHO05D000807 9.0e-10 68.6 181 25.4
Potri.016G047200 Populus trichocarpa HOM05D000125 ORTHO05D000120 1.2e-09 68.2 227 27.3
DCAR_012557 Daucus carota HOM05D000125 ORTHO05D000807 1.5e-09 67.8 245 26.1
QL09p001329 Quercus lobata HOM05D000125 ORTHO05D000120 1.5e-09 67.8 225 25.3
TWI39G0771 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 1.5e-09 67.8 226 27.4
Actinidia05848 Actinidia chinensis HOM05D000125 ORTHO05D000807 2.0e-09 67.4 149 32.2
Haze_04189 Corylus avellana HOM05D000125 ORTHO05D000120 2.6e-09 67.0 225 25.8
QL11p003228 Quercus lobata HOM05D000125 ORTHO05D000120 2.6e-09 67.0 227 28.2
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 3.4e-09 66.6 221 29.9
Cpa.g.sc12.39 Carica papaya HOM05D000125 ORTHO05D000120 4.4e-09 66.2 207 27.1
A08p12320 Brassica napus HOM05D000125 ORTHO05D000807 5.8e-09 65.9 143 30.8
BraA08t33224Z Brassica rapa HOM05D000125 ORTHO05D000807 5.8e-09 65.9 143 30.8
PGR004G1526 Punica granatum HOM05D000125 ORTHO05D000120 7.6e-09 65.5 232 27.2
CANSAT11G2595 Cannabis sativa HOM05D000125 ORTHO05D000807 9.9e-09 65.1 248 27.4
BolC8t48346H Brassica oleracea HOM05D000125 ORTHO05D000807 1.3e-08 64.7 143 30.1
PGR004G0547 Punica granatum HOM05D000125 ORTHO05D000120 1.7e-08 64.3 211 25.6
PGR004G0823 Punica granatum HOM05D000125 ORTHO05D000120 1.7e-08 64.3 226 25.2
ECA247G0358 Erigeron canadensis HOM05D000125 ORTHO05D000120 2.2e-08 63.9 221 23.1
MSTRG.21292 Avicennia marina HOM05D000125 ORTHO05D000120 2.9e-08 63.5 97 33.0
COL.COLO4_37101 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.9e-08 63.5 288 27.4
Potri.016G057800 Populus trichocarpa HOM05D000125 ORTHO05D000120 2.9e-08 63.5 227 25.1
Haze_04187 Corylus avellana HOM05D000125 ORTHO05D000120 3.8e-08 63.2 249 23.7
HanXRQChr17g0562041 Helianthus annuus HOM05D000125 ORTHO05D000120 3.8e-08 63.2 228 25.0
Lj2C88T14 Lonicera japonica HOM05D000790 ORTHO05D000769 3.8e-08 63.2 144 30.6
BcaC05g29930 Brassica carinata HOM05D000125 ORTHO05D000120 4.9e-08 62.8 219 27.9
BolC5t34921H Brassica oleracea HOM05D000125 ORTHO05D000120 4.9e-08 62.8 219 27.9
Sed0022121 Sechium edule HOM05D000125 ORTHO05D000120 4.9e-08 62.8 244 24.2
BcaC07g37965 Brassica carinata HOM05D000125 ORTHO05D000807 6.4e-08 62.4 134 29.9
Cpa.g.sc681.3 Carica papaya HOM05D000125 ORTHO05D000120 6.4e-08 62.4 258 25.6
VMungo1383G0449 Vigna mungo HOM05D000125 ORTHO05D000807 6.4e-08 62.4 151 27.8
MSTRG.21294 Avicennia marina HOM05D000125 ORTHO05D000120 8.4e-08 62.0 97 32.0
C05p62680 Brassica napus HOM05D000125 ORTHO05D000120 8.4e-08 62.0 236 26.7
Cc02_g27000 Coffea canephora HOM05D000125 ORTHO05D000807 1.1e-07 61.6 195 29.2
COL.COLO4_06702 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.1e-07 61.6 239 22.6
Sed0007446 Sechium edule HOM05D000125 ORTHO05D000120 1.4e-07 61.2 276 24.3
COL.COLO4_04760 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.9e-07 60.8 281 27.0
Haze_09098 Corylus avellana HOM05D000125 ORTHO05D000120 1.9e-07 60.8 265 25.3
TWI09G0470 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 1.9e-07 60.8 254 25.2
BcaB04g21361 Brassica carinata HOM05D000125 ORTHO05D000120 2.4e-07 60.5 230 25.2
TWI39G0227 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 5.4e-07 59.3 123 34.1
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 7.1e-07 58.9 276 25.0
SGA_v2.0_scaffold158G37506 Striga asiatica HOM05D000125 ORTHO05D000120 1.2e-06 58.2 235 23.4
BolC4t28603H Brassica oleracea HOM05D000125 ORTHO05D000807 1.6e-06 57.8 103 30.1
ECA247G3868 Erigeron canadensis HOM05D000125 ORTHO05D000120 1.6e-06 57.8 67 43.3
PGR004G2309 Punica granatum HOM05D000125 ORTHO05D000120 1.6e-06 57.8 231 25.5
BraA07t29734Z Brassica rapa HOM05D000125 ORTHO05D000807 2.1e-06 57.4 144 27.8
Lsat_1_v5_gn_2_79821 Lactuca sativa HOM05D000125 ORTHO05D000120 2.1e-06 57.4 147 27.2
Rhsim11G0053300 Rhododendron simsii HOM05D000125 ORTHO05D000120 2.1e-06 57.4 156 29.5
Actinidia31708 Actinidia chinensis HOM05D000125 ORTHO05D000807 2.7e-06 57.0 149 30.2
Thhalv10001796m.g Eutrema salsugineum HOM05D000125 ORTHO05D000807 2.7e-06 57.0 126 27.8
TWI09G0970 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 2.7e-06 57.0 225 25.3
Duzib106G1761 Durio zibethinus HOM05D000125 ORTHO05D000120 3.5e-06 56.6 209 27.3
ECA247G0465 Erigeron canadensis HOM05D000125 ORTHO05D000120 3.5e-06 56.6 124 31.5
TWI53G0150 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 3.5e-06 56.6 227 25.6
AT3G13590 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.6e-06 56.2 216 27.3
Prupe.7G078300 Prunus persica HOM05D000125 ORTHO05D000120 4.6e-06 56.2 253 24.5


User provided reference genes

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