Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 1.2e-205 719.5 352 100.0
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 4.5e-168 594.7 352 81.8
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 4.9e-154 548.1 344 77.6
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 7.5e-139 497.7 351 70.1
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 8.3e-138 494.2 345 68.1
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 5.4e-137 491.5 348 68.7
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 1.2e-136 490.3 348 67.8
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 2.1e-133 479.6 344 66.3
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 1.1e-132 477.2 346 66.2
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 1.5e-131 473.4 347 64.6
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 6.4e-130 468.0 346 63.3
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 6.4e-130 468.0 345 64.9
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 1.9e-129 466.5 344 65.7
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 2.4e-129 466.1 346 65.9
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 7.1e-129 464.5 344 66.0
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 9.2e-129 464.2 346 62.7
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 9.2e-129 464.2 343 65.0
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 1.2e-128 463.8 346 63.6
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 1.6e-128 463.4 347 62.2
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 2.1e-128 463.0 348 64.7
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 2.1e-128 463.0 347 62.5
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 2.7e-128 462.6 347 62.8
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 2.7e-128 462.6 344 64.8
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 3.5e-128 462.2 346 62.7
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 4.6e-128 461.8 348 64.9
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 6.0e-128 461.5 347 63.4
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 7.8e-128 461.1 347 65.4
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 7.8e-128 461.1 348 64.4
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 1.0e-127 460.7 346 62.4
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 1.3e-127 460.3 346 62.1
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 2.3e-127 459.5 343 62.7
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 2.3e-127 459.5 347 63.7
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 3.9e-127 458.8 347 61.7
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 3.9e-127 458.8 344 63.4
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 3.9e-127 458.8 347 62.8
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 6.6e-127 458.0 342 63.7
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 6.6e-127 458.0 347 64.8
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 8.6e-127 457.6 346 63.3
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 1.1e-126 457.2 344 62.5
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 1.9e-126 456.4 345 64.9
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 3.3e-126 455.7 345 66.1
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 3.3e-126 455.7 348 64.1
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 4.3e-126 455.3 347 63.7
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 4.3e-126 455.3 348 64.7
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 4.3e-126 455.3 347 63.1
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 5.6e-126 454.9 347 63.7
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 7.3e-126 454.5 344 64.8
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 9.5e-126 454.1 346 61.8
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.2e-125 453.8 347 62.8
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 2.1e-125 453.0 346 61.8
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 2.8e-125 452.6 343 63.0
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 3.6e-125 452.2 341 63.3
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 4.7e-125 451.8 354 62.4
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 8.1e-125 451.1 343 62.4
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 1.1e-124 450.7 346 62.1
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 4.0e-124 448.7 345 62.3
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 5.2e-124 448.4 351 62.1
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 6.8e-124 448.0 346 61.8
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 6.8e-124 448.0 345 63.8
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 6.8e-124 448.0 347 62.5
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.2e-123 447.2 348 62.9
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 1.5e-123 446.8 343 62.7
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 9.9e-123 444.1 349 63.9
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 1.3e-122 443.7 347 62.8
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 1.7e-122 443.4 348 61.2
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 1.7e-122 443.4 349 61.9
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 1.7e-122 443.4 345 62.9
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 6.4e-122 441.4 349 62.8
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 2.4e-121 439.5 344 62.8
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 2.4e-121 439.5 344 63.4
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 1.2e-120 437.2 348 62.4
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 1.0e-119 434.1 348 62.1
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.7e-119 433.3 344 60.8
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 2.3e-119 433.0 344 59.6
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 3.0e-119 432.6 349 63.0
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 5.1e-119 431.8 342 62.0
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 1.5e-118 430.3 346 62.1
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 2.5e-118 429.5 376 57.4
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 3.3e-118 429.1 344 60.2
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 1.2e-117 427.2 389 55.5
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 2.8e-117 426.0 344 59.9
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 3.6e-117 425.6 344 61.0
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.8e-116 423.3 345 60.9
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 2.9e-114 416.0 341 59.2
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 1.1e-113 414.1 377 56.2
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 7.1e-113 411.4 343 60.6
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 1.6e-112 410.2 348 56.0
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.8e-112 407.9 345 59.4
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 2.3e-111 406.4 345 59.1
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.0e-111 406.0 345 59.1
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.3e-109 400.6 345 58.0
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.1e-109 399.8 345 58.6
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 2.8e-109 399.4 352 56.0
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.5e-107 393.7 345 57.1
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 1.3e-106 390.6 350 56.9
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 4.9e-106 388.7 268 67.5
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 8.4e-106 387.9 296 64.9
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 8.4e-106 387.9 439 47.4
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 7.9e-104 381.3 348 56.6
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 1.0e-103 380.9 353 55.5
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 2.3e-103 379.8 342 55.8
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 9.6e-102 374.4 342 54.7
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 6.2e-101 371.7 342 54.4
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 4.0e-100 369.0 342 54.4
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 3.5e-96 355.9 344 53.2
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 4.3e-94 349.0 351 53.0
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 6.0e-88 328.6 260 65.4
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 1.3e-87 327.4 264 65.2
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 3.3e-86 322.8 297 56.2
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 1.5e-83 313.9 246 57.7
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 4.1e-76 289.3 183 70.5
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 4.1e-76 289.3 183 70.5
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 5.0e-74 282.3 355 42.8
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 7.9e-72 275.0 349 42.4
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 6.7e-63 245.4 341 39.3
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 9.1e-52 208.4 212 55.2
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 4.0e-47 193.0 179 55.9
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 3.7e-45 186.4 265 40.4
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.2e-41 173.3 209 48.3
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 5.5e-41 172.6 169 58.0
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.4e-38 163.3 195 48.7
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 8.6e-34 148.7 187 47.6
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.0e-31 140.2 237 39.7
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 2.3e-23 114.0 81 65.4
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 4.0e-23 113.2 168 35.1
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 6.0e-19 99.4 127 38.6
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 5.2e-15 86.3 60 65.0
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 5.2e-15 86.3 60 65.0
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 5.2e-15 86.3 60 65.0
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 4.4e-14 83.2 60 63.3
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 8.3e-13 79.0 104 44.2
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.1e-12 78.6 78 53.8
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 2.4e-12 77.4 78 53.8
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 9.2e-12 75.5 78 52.6
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 6.0e-11 72.8 76 47.4
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 6.0e-11 72.8 76 47.4
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.5e-09 67.4 62 54.8
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 5.6e-09 66.2 59 52.5
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.4e-07 61.6 70 45.7


User provided reference genes

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