Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 2.9e-148 528.5 261 100.0
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.3e-98 363.6 263 72.6
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.8e-97 359.8 252 71.4
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 6.9e-81 304.7 266 58.3
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 1.5e-80 303.5 271 59.0
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 2.0e-80 303.1 270 59.6
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.0e-79 300.8 271 57.9
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 8.5e-79 297.7 271 57.2
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.1e-78 297.4 271 57.2
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 4.2e-78 295.4 232 60.3
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 2.1e-77 293.1 271 55.4
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 2.7e-77 292.7 202 69.3
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 3.6e-77 292.4 272 57.7
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 2.3e-76 289.7 239 59.0
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 8.8e-76 287.7 265 56.2
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 8.8e-76 287.7 204 65.7
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 8.8e-76 287.7 207 64.3
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 4.3e-75 285.4 265 56.2
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 4.3e-75 285.4 245 58.4
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 4.3e-75 285.4 273 54.2
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 5.7e-75 285.0 265 55.8
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 9.7e-75 284.3 274 56.2
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 9.7e-75 284.3 216 61.6
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 4.8e-74 282.0 273 54.9
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 8.2e-74 281.2 268 53.7
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 1.1e-73 280.8 273 54.2
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.4e-73 280.4 252 56.7
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 1.4e-73 280.4 277 54.2
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 1.4e-73 280.4 199 64.3
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 1.8e-73 280.0 202 64.9
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.2e-72 277.3 202 64.9
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 1.5e-72 276.9 213 62.4
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 1.5e-72 276.9 277 53.4
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 1.7e-71 273.5 236 58.1
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 1.7e-71 273.5 271 54.6
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 2.2e-71 273.1 269 52.8
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 2.9e-71 272.7 272 50.4
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 1.1e-70 270.8 270 51.9
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.4e-70 270.4 271 51.3
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 1.9e-70 270.0 259 52.9
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 2.5e-70 269.6 270 52.2
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 4.2e-70 268.9 267 51.7
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 5.5e-70 268.5 229 57.6
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 5.5e-70 268.5 186 65.6
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 7.2e-70 268.1 259 52.5
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 9.4e-70 267.7 268 52.6
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.2e-69 267.3 276 51.8
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 1.6e-69 266.9 206 61.7
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 2.1e-69 266.5 275 53.1
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.1e-69 266.5 275 53.1
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 2.7e-69 266.2 203 61.6
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 2.7e-69 266.2 250 54.4
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 3.6e-69 265.8 203 61.6
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 4.7e-69 265.4 249 54.2
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 4.7e-69 265.4 222 59.0
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 1.0e-68 264.2 213 56.3
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.4e-68 263.8 281 51.6
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.8e-68 263.5 270 51.5
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.8e-68 263.5 281 51.6
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 2.3e-68 263.1 232 54.7
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 3.0e-68 262.7 265 51.3
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 3.3e-67 259.2 270 51.5
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 4.4e-67 258.8 232 54.3
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 5.7e-67 258.5 267 52.1
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 7.4e-67 258.1 272 51.5
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 4.8e-66 255.4 252 54.0
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 4.8e-66 255.4 257 53.3
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 1.8e-65 253.4 222 55.9
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 3.1e-65 252.7 232 53.4
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 7.0e-65 251.5 271 49.8
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 1.2e-64 250.8 267 49.1
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 2.0e-64 250.0 267 50.9
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 2.6e-64 249.6 263 52.1
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 5.9e-64 248.4 263 52.1
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 7.7e-64 248.1 266 51.5
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 1.0e-63 247.7 265 48.7
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 3.2e-62 242.7 213 56.8
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 3.2e-62 242.7 213 56.8
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 3.2e-62 242.7 213 56.8
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 4.2e-62 242.3 271 49.8
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 9.4e-62 241.1 221 55.7
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 2.1e-61 240.0 266 50.0
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 3.6e-61 239.2 249 50.6
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 8.0e-61 238.0 218 54.1
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 8.8e-60 234.6 248 49.6
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.1e-59 234.2 261 49.8
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 1.5e-59 233.8 266 47.4
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.5e-59 233.8 203 57.6
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 1.5e-59 233.8 260 48.5
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 2.6e-59 233.0 257 48.2
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 5.7e-59 231.9 203 56.7
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.7e-58 230.3 200 54.5
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 1.4e-57 227.3 240 50.0
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 1.8e-57 226.9 233 48.9
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.0e-52 209.5 232 47.0
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 4.4e-51 205.7 239 46.9
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 9.8e-51 204.5 206 49.0
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 2.4e-49 199.9 200 51.5
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.2e-45 187.6 244 39.8
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 2.7e-45 186.4 201 51.7
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 4.7e-45 185.7 225 40.9
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 6.1e-45 185.3 175 56.6
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 8.6e-39 164.9 149 53.0
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.6e-32 144.1 168 47.6
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 5.9e-32 142.1 253 36.0
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.7e-31 140.6 230 35.7
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 2.8e-21 106.7 208 34.6
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 3.7e-18 96.3 192 34.4
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 1.4e-17 94.4 188 30.3
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 7.1e-17 92.0 75 53.3
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 6.0e-16 89.0 192 33.3
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 3.9e-15 86.3 205 27.8
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 3.6e-13 79.7 65 56.9
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 9.9e-11 71.6 61 52.5
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 3.2e-09 66.6 70 48.6
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 9.2e-09 65.1 70 47.1


User provided reference genes

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