Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 2.8e-67 258.5 128 100.0
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 7.4e-60 233.8 131 89.3
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 4.5e-57 224.6 131 86.3
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 1.7e-56 222.6 124 90.3
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 8.7e-53 210.3 127 78.7
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.9e-52 209.1 127 79.5
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.6e-51 206.1 129 77.5
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 2.1e-51 205.7 129 77.5
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 6.9e-50 200.7 126 77.8
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.5e-49 199.5 111 83.8
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 1.5e-49 199.5 111 83.8
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.0e-49 199.1 127 77.2
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 7.6e-49 197.2 110 82.7
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.3e-48 196.4 135 72.6
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.2e-48 195.7 116 81.0
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 2.2e-48 195.7 129 74.4
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 2.9e-48 195.3 111 82.0
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 5.0e-48 194.5 129 72.9
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.1e-47 193.4 127 75.6
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 3.2e-47 191.8 130 73.1
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 3.2e-47 191.8 111 79.3
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 1.6e-46 189.5 126 73.0
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 4.6e-46 188.0 126 73.0
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 6.1e-46 187.6 112 78.6
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 6.1e-46 187.6 103 84.5
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 6.1e-46 187.6 109 81.7
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 7.9e-46 187.2 115 75.7
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 7.9e-46 187.2 144 66.7
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 1.0e-45 186.8 130 70.8
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.3e-45 186.4 105 82.9
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 1.8e-45 186.0 128 71.9
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 3.0e-45 185.3 126 70.6
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 3.0e-45 185.3 157 64.3
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 3.9e-45 184.9 111 79.3
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 3.9e-45 184.9 106 81.1
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 5.1e-45 184.5 124 71.8
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 6.7e-45 184.1 112 75.9
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 6.7e-45 184.1 126 73.0
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 6.7e-45 184.1 110 77.3
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 8.7e-45 183.7 144 67.4
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 8.7e-45 183.7 107 78.5
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 1.1e-44 183.3 127 71.7
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 1.9e-44 182.6 109 78.0
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 2.5e-44 182.2 126 69.0
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 3.3e-44 181.8 105 81.0
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 3.3e-44 181.8 129 70.5
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 3.3e-44 181.8 109 76.1
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 7.4e-44 180.6 103 79.6
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 9.7e-44 180.3 129 69.8
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 9.7e-44 180.3 129 69.8
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.3e-43 179.9 111 75.7
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 1.6e-43 179.5 104 82.7
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 2.2e-43 179.1 114 71.9
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 2.2e-43 179.1 129 67.4
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 2.2e-43 179.1 101 80.2
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 2.8e-43 178.7 124 71.0
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 3.7e-43 178.3 114 71.9
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 3.7e-43 178.3 111 75.7
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 3.7e-43 178.3 127 69.3
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 3.7e-43 178.3 126 69.0
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 6.3e-43 177.6 129 68.2
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 8.2e-43 177.2 127 69.3
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 8.2e-43 177.2 127 69.3
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 1.1e-42 176.8 129 66.7
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 1.1e-42 176.8 118 71.2
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.4e-42 176.4 99 82.8
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 1.4e-42 176.4 99 82.8
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.4e-42 176.4 99 82.8
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 1.4e-42 176.4 99 82.8
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.4e-42 176.4 103 77.7
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.4e-42 176.4 103 77.7
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.4e-42 176.4 110 74.5
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 1.8e-42 176.0 131 68.7
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 1.8e-42 176.0 106 74.5
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 1.8e-42 176.0 126 65.9
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 2.4e-42 175.6 127 66.9
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 2.4e-42 175.6 127 68.5
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 4.1e-42 174.9 110 76.4
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 5.3e-42 174.5 99 80.8
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 1.5e-41 172.9 101 79.2
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 1.5e-41 172.9 104 80.8
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 3.4e-41 171.8 127 66.1
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 5.9e-41 171.0 106 73.6
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 1.0e-40 170.2 112 70.5
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.7e-40 169.5 119 69.7
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 2.2e-40 169.1 119 63.0
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 1.4e-39 166.4 117 66.7
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 2.5e-39 165.6 104 74.0
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 4.2e-39 164.9 110 68.2
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 5.5e-39 164.5 158 58.2
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 7.2e-39 164.1 120 68.3
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.2e-38 163.3 94 78.7
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 1.6e-38 162.9 100 75.0
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 2.7e-38 162.2 98 76.5
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 3.6e-38 161.8 124 60.5
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 3.6e-38 161.8 102 73.5
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 6.7e-37 157.5 134 60.4
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 7.4e-36 154.1 153 54.2
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 9.7e-36 153.7 103 69.9
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 4.8e-35 151.4 166 50.0
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.1e-34 150.2 105 71.4
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 2.2e-32 142.5 105 65.7
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 3.8e-32 141.7 89 74.2
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 4.2e-31 138.3 82 79.3
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 5.5e-31 137.9 101 65.3
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 1.7e-27 126.3 75 74.7
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.7e-27 126.3 82 73.2
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 2.8e-27 125.6 101 58.4
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 8.2e-27 124.0 104 55.8
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 1.1e-26 123.6 99 65.7
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.4e-26 123.2 64 89.1
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 4.1e-26 121.7 64 89.1
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.5e-25 119.8 112 54.5
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 6.5e-24 114.4 64 82.8
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.9e-23 112.8 69 73.9
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 4.7e-22 108.2 63 74.6
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 7.4e-20 100.9 53 86.8
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 7.0e-18 94.4 104 44.2
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 1.6e-17 93.2 64 68.8
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.0e-16 90.5 98 41.8
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 8.5e-16 87.4 103 40.8
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.2e-15 85.5 63 68.3
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 5.5e-15 84.7 94 47.9
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 9.4e-15 84.0 57 70.2
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.2e-14 83.6 90 40.0
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.2e-06 57.0 63 49.2
Medtr1g094845 Medicago truncatula HOM05D006193 ORTHO05D007808 1.6e-06 56.6 35 74.3


User provided reference genes

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