Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0022811 Helianthus annuus HOM05D002069 ORTHO05D001421 2.3e-154 548.9 280 100.0
HanXRQChr13g0412961 Helianthus annuus HOM05D002069 ORTHO05D001421 5.1e-21 105.9 169 35.5
HanXRQChr14g0449651 Helianthus annuus HOM05D002069 ORTHO05D001421 5.1e-21 105.9 169 35.5
HanXRQChr08g0207601 Helianthus annuus HOM05D002069 ORTHO05D001421 1.1e-15 88.2 174 29.3
ECA240G0553 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.6e-14 82.8 140 29.3
ECA233G3341 Erigeron canadensis HOM05D002069 ORTHO05D001421 6.0e-14 82.4 140 30.0
ECA238G1870 Erigeron canadensis HOM05D000097 ORTHO05D001421 6.0e-14 82.4 140 30.0
ECA233G0231 Erigeron canadensis HOM05D002069 ORTHO05D001421 7.8e-14 82.0 142 31.0
ECA233G5305 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.3e-13 81.3 190 28.4
ECA238G0948 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.9e-13 79.7 216 28.7
ECA238G0639 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.1e-13 79.3 140 29.3
Lsat_1_v5_gn_9_109960 Lactuca sativa HOM05D002069 ORTHO05D001421 6.6e-13 79.0 147 31.3
Lsat_1_v5_gn_9_46640 Lactuca sativa HOM05D002069 ORTHO05D001421 6.6e-13 79.0 147 31.3
ECA240G1105 Erigeron canadensis HOM05D000122 ORTHO05D001883 8.7e-13 78.6 140 28.6
ECA236G4011 Erigeron canadensis HOM05D002069 ORTHO05D002997 1.9e-12 77.4 239 26.8
Lsat_1_v5_gn_2_65260 Lactuca sativa HOM05D002069 ORTHO05D001421 1.9e-12 77.4 146 30.8
Lsat_1_v5_gn_3_34060 Lactuca sativa HOM05D002069 ORTHO05D001421 1.9e-12 77.4 146 30.8
Lsat_1_v5_gn_5_100580 Lactuca sativa HOM05D002069 ORTHO05D001421 1.9e-12 77.4 146 30.8
Lsat_1_v5_gn_8_79561 Lactuca sativa HOM05D002069 ORTHO05D001421 1.9e-12 77.4 146 30.8
ECA248G3613 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-12 76.6 210 29.5
Lsat_1_v5_gn_4_176160 Lactuca sativa HOM05D002069 ORTHO05D001421 3.3e-12 76.6 168 29.2
ECA232G0092 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.8e-11 73.6 243 23.9
HanXRQChr07g0191871 Helianthus annuus HOM05D002069 ORTHO05D001421 3.6e-11 73.2 158 26.6
Lsat_1_v5_gn_4_60840 Lactuca sativa HOM05D005502 ORTHO05D001421 3.6e-11 73.2 209 27.3
ECA232G4022 Erigeron canadensis HOM05D002069 ORTHO05D001421 6.2e-11 72.4 128 27.3
Lsat_1_v5_gn_4_41940 Lactuca sativa HOM05D002069 ORTHO05D001421 6.2e-11 72.4 147 33.3
Lsat_1_v5_gn_6_91100 Lactuca sativa HOM05D005502 ORTHO05D001421 8.1e-11 72.0 173 28.9
Lsat_1_v5_gn_7_2960 Lactuca sativa HOM05D002069 ORTHO05D001421 1.4e-10 71.2 146 30.1
ECA240G4398 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.8e-10 70.9 109 29.4
Lsat_1_v5_gn_3_22140 Lactuca sativa HOM05D005502 ORTHO05D001421 1.8e-10 70.9 189 27.5
Lsat_1_v5_gn_9_67060 Lactuca sativa HOM05D005502 ORTHO05D001421 1.8e-10 70.9 178 26.4
ECA238G0549 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.4e-10 70.5 133 30.1
ECA234G0167 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.1e-10 70.1 149 31.5
Lsat_1_v5_gn_8_19140 Lactuca sativa HOM05D005502 ORTHO05D001421 3.1e-10 70.1 192 26.0
ECA233G2044 Erigeron canadensis HOM05D002069 ORTHO05D001421 9.0e-10 68.6 89 38.2
ECA246G2841 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.5e-09 67.8 193 28.5
Lsat_1_v5_gn_8_12700 Lactuca sativa HOM05D005502 ORTHO05D001421 2.0e-09 67.4 194 26.8
ECA238G3097 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.6e-09 67.0 175 24.0
ECA240G2037 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.6e-09 67.0 112 30.4
ECA240G0431 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.4e-09 66.2 112 29.5
Lsat_1_v5_gn_3_50400 Lactuca sativa HOM05D002069 ORTHO05D001421 4.4e-09 66.2 106 35.8
Lsat_1_v5_gn_8_17641 Lactuca sativa HOM05D015967 ORTHO05D029970 4.4e-09 66.2 138 26.8
ECA247G0831 Erigeron canadensis HOM05D002069 ORTHO05D002997 5.8e-09 65.9 112 28.6
Lsat_1_v5_gn_4_159080 Lactuca sativa HOM05D005502 ORTHO05D001421 9.9e-09 65.1 123 27.6
HanXRQChr04g0112951 Helianthus annuus HOM05D002069 ORTHO05D001421 1.3e-08 64.7 141 28.4
HanXRQChr11g0351751 Helianthus annuus HOM05D002069 ORTHO05D001421 1.3e-08 64.7 141 28.4
Lsat_1_v5_gn_1_21581 Lactuca sativa HOM05D005502 ORTHO05D001421 2.2e-08 63.9 127 25.2
Lsat_1_v5_gn_3_8220 Lactuca sativa HOM05D005502 ORTHO05D001421 2.2e-08 63.9 127 25.2
Lsat_1_v5_gn_5_106280 Lactuca sativa HOM05D005502 ORTHO05D001421 2.2e-08 63.9 252 21.4
Lsat_1_v5_gn_5_34300 Lactuca sativa HOM05D005502 ORTHO05D001421 2.2e-08 63.9 104 30.8
Lsat_1_v5_gn_6_86360 Lactuca sativa HOM05D005502 ORTHO05D001421 2.2e-08 63.9 127 25.2
Lsat_1_v5_gn_8_34680 Lactuca sativa HOM05D005502 ORTHO05D001421 2.2e-08 63.9 127 25.2
Lsat_1_v5_gn_8_18440 Lactuca sativa HOM05D002069 ORTHO05D001421 2.9e-08 63.5 159 27.7
ECA233G5076 Erigeron canadensis HOM05D002069 ORTHO05D009717 3.8e-08 63.2 85 37.6
Lsat_1_v5_gn_0_7661 Lactuca sativa HOM05D005502 ORTHO05D001421 3.8e-08 63.2 127 25.2
Lsat_1_v5_gn_4_110341 Lactuca sativa HOM05D002069 ORTHO05D001421 3.8e-08 63.2 161 28.6
Lsat_1_v5_gn_5_166541 Lactuca sativa HOM05D005502 ORTHO05D001421 3.8e-08 63.2 127 25.2
Lsat_1_v5_gn_5_42101 Lactuca sativa HOM05D005502 ORTHO05D001421 3.8e-08 63.2 122 27.9
Lsat_1_v5_gn_3_74480 Lactuca sativa HOM05D002069 ORTHO05D001421 4.9e-08 62.8 116 31.0
ECA232G4664 Erigeron canadensis HOM05D002069 ORTHO05D001421 6.4e-08 62.4 131 30.5
ECA236G0264 Erigeron canadensis HOM05D002069 ORTHO05D001421 8.4e-08 62.0 131 29.8
ECA247G0370 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.1e-07 61.6 124 26.6
Lsat_1_v5_gn_7_57041 Lactuca sativa HOM05D002069 ORTHO05D001421 1.1e-07 61.6 156 24.4
Lsat_1_v5_gn_8_44740 Lactuca sativa HOM05D005502 ORTHO05D001421 1.4e-07 61.2 195 22.6
ECA247G0643 Erigeron canadensis HOM05D002069 ORTHO05D002997 1.9e-07 60.8 139 28.8
Lsat_1_v5_gn_1_17840 Lactuca sativa HOM05D005502 ORTHO05D001421 1.9e-07 60.8 252 21.0
Lsat_1_v5_gn_1_9880 Lactuca sativa HOM05D005502 ORTHO05D001421 1.9e-07 60.8 126 23.8
Lsat_1_v5_gn_4_180461 Lactuca sativa HOM05D005502 ORTHO05D001421 1.9e-07 60.8 206 23.3
Lsat_1_v5_gn_9_39620 Lactuca sativa HOM05D005502 ORTHO05D001421 2.4e-07 60.5 116 27.6
ECA238G2139 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.2e-07 60.1 116 31.0
Lsat_1_v5_gn_1_117620 Lactuca sativa HOM05D005502 ORTHO05D001421 4.2e-07 59.7 267 23.2
Lsat_1_v5_gn_1_59601 Lactuca sativa HOM05D005502 ORTHO05D001421 4.2e-07 59.7 127 24.4
Lsat_1_v5_gn_4_66980 Lactuca sativa HOM05D002069 ORTHO05D001421 4.2e-07 59.7 121 32.2
Lsat_1_v5_gn_5_95781 Lactuca sativa HOM05D000580 ORTHO05D001785 4.2e-07 59.7 150 23.3
Lsat_1_v5_gn_1_64161 Lactuca sativa HOM05D002069 ORTHO05D001421 7.1e-07 58.9 224 27.2
Lsat_1_v5_gn_4_39501 Lactuca sativa HOM05D005502 ORTHO05D001421 7.1e-07 58.9 127 22.8
Lsat_1_v5_gn_3_5621 Lactuca sativa HOM05D002069 ORTHO05D001421 9.3e-07 58.5 198 23.7
HanXRQChr02g0033931 Helianthus annuus HOM05D002069 ORTHO05D002997 3.5e-06 56.6 80 35.0


User provided reference genes

Program Settings