Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0022031 Helianthus annuus HOM05D007897 ORTHO05D010061 6.7e-218 760.8 497 100.0
HanXRQChr17g0535531 Helianthus annuus HOM05D007897 ORTHO05D010061 3.3e-209 731.9 501 96.4
Lsat_1_v5_gn_1_70121 Lactuca sativa HOM05D007897 ORTHO05D010061 4.2e-135 485.7 493 71.2
ECA248G1461 Erigeron canadensis HOM05D007897 ORTHO05D010061 4.6e-134 482.3 498 71.9
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 1.0e-72 278.5 499 55.9
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 3.3e-71 273.5 486 56.0
Dinv32167 Davidia involucrata HOM05D007897 ORTHO05D010061 5.6e-71 272.7 491 56.8
TAR633G2399 Trochodendron aralioides HOM05D007897 ORTHO05D010061 2.9e-67 260.4 476 57.1
COL.COLO4_35959 Corchorus olitorius HOM05D007897 ORTHO05D010061 4.1e-66 256.5 455 51.0
TAR633G2792 Trochodendron aralioides HOM05D007897 ORTHO05D010061 1.2e-65 255.0 494 54.3
Cpa.g.sc157.16 Carica papaya HOM05D007897 ORTHO05D010061 1.6e-65 254.6 486 55.3
Thecc.04G191100 Theobroma cacao HOM05D007897 ORTHO05D010061 4.6e-65 253.1 458 56.1
Duzib212G0894 Durio zibethinus HOM05D007897 ORTHO05D010061 3.9e-64 250.0 434 50.2
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 1.5e-63 248.1 472 54.9
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 1.9e-63 247.7 456 55.9
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 1.9e-63 247.7 495 46.7
QL06p027281 Quercus lobata HOM05D007897 ORTHO05D010061 2.5e-63 247.3 426 59.2
CARHR220230 Cardamine hirsuta HOM05D007897 ORTHO05D010061 3.6e-62 243.4 444 54.3
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 6.2e-62 242.7 475 54.5
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 1.0e-61 241.9 451 47.9
Gohir.D09G201400 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.3e-61 240.7 424 51.9
Ciclev10004784m.g Citrus clementina HOM05D007897 ORTHO05D010061 3.1e-61 240.4 443 56.2
Gorai.006G225200 Gossypium raimondii HOM05D007897 ORTHO05D010061 5.2e-61 239.6 424 51.7
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 5.2e-61 239.6 486 46.1
BcaB08g35766 Brassica carinata HOM05D007897 ORTHO05D010061 2.0e-60 237.7 487 51.7
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 2.0e-60 237.7 461 54.9
Carub.0007s2820 Capsella rubella HOM05D007897 ORTHO05D010061 5.8e-60 236.1 433 54.3
AL7G42190 Arabidopsis lyrata HOM05D007897 ORTHO05D010061 9.8e-60 235.3 441 54.6
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 1.1e-58 231.9 448 54.9
Thhalv10027442m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 9.2e-58 228.8 493 51.9
HanXRQChr09g0243521 Helianthus annuus HOM05D007897 ORTHO05D010061 3.5e-57 226.9 121 92.6
C09p44340 Brassica napus HOM05D007897 ORTHO05D010061 6.0e-57 226.1 478 51.7
A10p11440 Brassica napus HOM05D007897 ORTHO05D010061 7.8e-57 225.7 466 53.4
Eucgr.L00640 Eucalyptus grandis HOM05D007897 ORTHO05D010061 7.8e-57 225.7 501 42.3
BraA10t43238Z Brassica rapa HOM05D007897 ORTHO05D010061 1.3e-56 224.9 466 53.2
Cfa008662 Carpinus fangiana HOM05D007897 ORTHO05D010061 3.0e-56 223.8 492 53.3
THA.LOC104808674 Tarenaya hassleriana HOM05D007897 ORTHO05D010061 1.9e-55 221.1 461 52.5
Haze_11681 Corylus avellana HOM05D007897 ORTHO05D010061 4.3e-55 219.9 484 53.1
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 4.3e-55 219.9 441 55.1
AT4G14190 Arabidopsis thaliana HOM05D007897 ORTHO05D010061 5.6e-55 219.5 499 50.1
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 5.6e-55 219.5 455 53.2
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 2.8e-54 217.2 422 57.8
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 2.8e-54 217.2 441 54.6
Sp6g16180 Schrenkiella parvula HOM05D007897 ORTHO05D010061 6.2e-54 216.1 425 54.8
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 8.1e-54 215.7 422 57.3
BolC9t57304H Brassica oleracea HOM05D007897 ORTHO05D010061 1.1e-53 215.3 479 51.8
FvH4_4g12861 Fragaria vesca HOM05D007897 ORTHO05D010061 8.9e-53 212.2 459 52.3
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 1.2e-52 211.8 498 41.0
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 2.9e-51 207.2 377 60.5
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 8.3e-51 205.7 480 50.8
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 3.2e-50 203.8 459 51.6
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 4.1e-50 203.4 422 54.0
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 4.1e-50 203.4 453 52.8
RcHm_v2.0_Chr4g0412521 Rosa chinensis HOM05D007897 ORTHO05D010061 7.8e-49 199.1 481 49.7
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 3.3e-47 193.7 439 54.0
CiPaw.02G062400 Carya illinoinensis HOM05D007897 ORTHO05D010061 7.3e-47 192.6 188 52.7
Gohir.A09G207900 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.1e-46 191.0 187 52.4
Glyma.11G253700 Glycine max HOM05D007897 ORTHO05D010061 2.3e-45 187.6 477 50.1
Atru.chr3.1764 Acer truncatum HOM05D007897 ORTHO05D010061 8.9e-45 185.7 174 51.7
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 4.4e-44 183.3 195 48.2
Aa31LG9G3200 Aethionema arabicum HOM05D007897 ORTHO05D010061 5.8e-44 183.0 487 47.8
BcaC04g20377 Brassica carinata HOM05D007897 ORTHO05D010061 7.1e-42 176.0 479 48.2
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 7.1e-42 176.0 169 51.5
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 3.0e-40 170.6 184 46.7
HPP92_007232 Vanilla planifolia HOM05D007897 ORTHO05D010061 2.4e-37 161.0 422 51.4
FAN22G1341 Fragaria x ananassa HOM05D007897 ORTHO05D010061 3.1e-37 160.6 178 46.1
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 1.3e-35 155.2 384 54.7
HanXRQChr09g0243531 Helianthus annuus HOM05D007897 ORTHO05D010061 8.7e-32 142.5 83 86.7
Manes.05G199032 Manihot esculenta HOM05D007897 ORTHO05D010061 1.3e-30 138.7 327 59.9
arahy.Tifrunner.gnm1.ann1.EZRM4Y Arachis hypogaea HOM05D007897 ORTHO05D010061 3.5e-25 120.6 358 56.1
Prupe.1G171300 Prunus persica HOM05D007897 ORTHO05D010061 4.9e-19 100.1 167 38.9
Thhalv10027431m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 2.3e-16 91.3 106 42.5
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 6.5e-11 73.2 197 29.4
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 6.5e-11 73.2 195 30.8
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 1.1e-10 72.4 193 28.5
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 1.4e-10 72.0 197 30.5
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 1.9e-10 71.6 195 30.3
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 2.5e-10 71.2 185 26.5
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 3.2e-10 70.9 195 31.3
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 7.1e-10 69.7 193 30.1
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 1.2e-09 68.9 190 26.8
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 1.2e-09 68.9 197 27.4
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 2.1e-09 68.2 200 30.0
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 2.7e-09 67.8 188 28.7
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 3.5e-09 67.4 200 27.0
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 1.3e-08 65.5 197 27.9
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 2.3e-08 64.7 200 28.5
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 3.9e-08 63.9 197 26.4
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 6.7e-08 63.2 195 27.7
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 6.7e-08 63.2 195 27.7
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 8.7e-08 62.8 195 27.7
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 8.7e-08 62.8 198 26.8
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.5e-07 62.0 194 27.3
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 1.5e-07 62.0 195 28.2
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 2.5e-07 61.2 194 26.8
Gorai.002G182100 Gossypium raimondii HOM05D007897 ORTHO05D010061 4.3e-07 60.5 83 41.0
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 4.3e-07 60.5 194 25.3
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 4.3e-07 60.5 194 25.3
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 5.7e-07 60.1 198 26.3
A02p10540 Brassica napus HOM05D007897 ORTHO05D010061 9.7e-07 59.3 63 42.9
FAN22G1963 Fragaria x ananassa HOM05D007897 ORTHO05D010061 9.7e-07 59.3 77 41.6
Gorai.001G135500 Gossypium raimondii HOM05D007897 ORTHO05D010061 1.3e-06 58.9 87 42.5
Gohir.D01G146401 Gossypium hirsutum HOM05D007897 ORTHO05D010061 1.6e-06 58.5 84 40.5
Gohir.D07G125650 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.8e-06 57.8 84 42.9
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 3.7e-06 57.4 127 29.9


User provided reference genes

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