Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 6.3e-59 230.7 130 100.0
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 6.8e-53 210.7 129 91.5
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 8.9e-53 210.3 134 91.8
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.2e-52 209.9 133 89.5
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 3.4e-52 208.4 133 88.7
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 5.7e-52 207.6 124 93.5
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 1.7e-51 206.1 129 89.9
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 4.9e-51 204.5 130 89.2
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 6.3e-51 204.1 129 88.4
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 8.3e-51 203.8 127 89.0
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.8e-50 202.6 130 88.5
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 2.4e-50 202.2 130 88.5
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 2.4e-50 202.2 124 89.5
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 4.1e-50 201.4 129 88.4
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 5.4e-50 201.1 129 86.8
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 7.0e-50 200.7 129 86.8
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 9.2e-50 200.3 129 87.6
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 9.2e-50 200.3 124 88.7
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 86.9
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.6e-49 199.5 131 86.3
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.6e-49 199.5 131 86.3
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 1.6e-49 199.5 130 86.2
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 2.0e-49 199.1 130 85.4
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 2.7e-49 198.7 133 85.0
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 2.7e-49 198.7 129 86.0
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 3.5e-49 198.4 134 85.1
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 3.5e-49 198.4 130 85.4
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.5e-49 198.4 131 85.5
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 3.5e-49 198.4 129 85.3
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 4.5e-49 198.0 130 85.4
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 4.5e-49 198.0 129 85.3
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 4.5e-49 198.0 130 84.6
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 4.5e-49 198.0 129 86.0
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 4.5e-49 198.0 131 85.5
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 5.9e-49 197.6 129 85.3
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 7.8e-49 197.2 130 85.4
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 7.8e-49 197.2 131 85.5
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 7.8e-49 197.2 130 84.6
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 1.0e-48 196.8 124 86.3
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.0e-48 196.8 124 87.9
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 1.0e-48 196.8 130 84.6
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.3e-48 196.4 130 83.8
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.3e-48 196.4 130 83.8
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.7e-48 196.1 131 85.5
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.7e-48 196.1 129 84.5
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 2.3e-48 195.7 130 83.8
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 2.3e-48 195.7 127 85.8
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 5.0e-48 194.5 130 83.1
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 6.6e-48 194.1 130 84.6
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 8.6e-48 193.7 127 84.3
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 8.6e-48 193.7 129 83.7
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 8.6e-48 193.7 129 83.7
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 1.1e-47 193.4 130 83.8
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.1e-47 193.4 129 82.9
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 1.5e-47 193.0 128 81.2
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 1.5e-47 193.0 129 82.9
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.5e-47 193.0 131 84.0
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 1.9e-47 192.6 129 83.7
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 1.9e-47 192.6 130 83.1
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 2.5e-47 192.2 130 83.1
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 3.3e-47 191.8 137 81.0
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.3e-47 191.4 133 83.5
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 4.3e-47 191.4 130 82.3
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.6e-46 189.5 130 81.5
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 2.1e-46 189.1 131 80.9
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 2.1e-46 189.1 131 80.9
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 2.1e-46 189.1 126 83.3
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.0e-45 186.8 144 76.4
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 1.8e-45 186.0 139 77.7
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 1.8e-45 186.0 129 78.3
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 6.8e-45 184.1 130 79.2
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 6.8e-45 184.1 130 79.2
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 6.8e-45 184.1 130 79.2
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 2.0e-44 182.6 112 86.6
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 2.6e-44 182.2 130 78.5
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 2.6e-44 182.2 130 78.5
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 3.4e-44 181.8 112 85.7
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 5.8e-44 181.0 111 88.3
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 9.8e-44 180.3 106 93.4
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.3e-43 179.9 130 79.2
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 1.7e-43 179.5 130 76.2
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 3.7e-43 178.3 115 80.9
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.7e-43 178.3 124 81.5
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 4.9e-43 177.9 132 76.5
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 4.9e-43 177.9 112 84.8
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 6.4e-43 177.6 112 86.6
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 6.4e-43 177.6 130 76.9
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 1.9e-42 176.0 110 86.4
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 3.2e-42 175.3 127 77.2
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 3.2e-42 175.3 124 79.8
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 5.4e-42 174.5 127 77.2
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 5.4e-42 174.5 185 60.5
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 2.0e-41 172.6 110 85.5
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 6.0e-41 171.0 105 89.5
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 1.0e-40 170.2 108 85.2
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 1.0e-40 170.2 107 85.0
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 3.0e-40 168.7 120 78.3
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 3.9e-40 168.3 128 75.8
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 3.9e-40 168.3 116 84.5
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 6.6e-40 167.5 129 73.6
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 8.6e-40 167.2 105 87.6
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 1.9e-39 166.0 112 78.6
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.9e-39 166.0 122 75.4
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 1.9e-39 166.0 123 76.4
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 5.6e-39 164.5 105 85.7
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 5.6e-39 164.5 133 74.4
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 2.1e-38 162.5 108 80.6
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 2.3e-37 159.1 120 70.0
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 8.9e-37 157.1 87 93.1
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 2.6e-36 155.6 122 72.1
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 2.6e-36 155.6 87 93.1
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 4.4e-36 154.8 133 69.2
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 5.8e-36 154.5 161 58.4
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 2.2e-35 152.5 91 89.0
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 4.9e-35 151.4 122 65.6
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 8.3e-35 150.6 128 63.3
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 3.2e-34 148.7 84 89.3
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 4.1e-34 148.3 92 85.9
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 4.1e-34 148.3 90 86.7
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 9.2e-34 147.1 90 87.8
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 1.2e-33 146.7 95 82.1
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 2.7e-33 145.6 110 67.3
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 3.5e-33 145.2 95 81.1
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 4.6e-33 144.8 121 69.4
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 6.6e-32 141.0 91 83.5
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 1.5e-31 139.8 132 64.4
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 1.9e-31 139.4 88 89.8
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 2.5e-31 139.0 94 79.8
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 6.2e-30 134.4 87 86.2
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 8.9e-29 130.6 129 65.1
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.5e-28 129.8 93 76.3
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.0e-28 129.4 95 80.0
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 4.4e-28 128.3 99 72.7
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 2.2e-27 125.9 71 91.5
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 3.2e-26 122.1 65 96.9
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 3.2e-26 122.1 65 96.9
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 5.1e-24 114.8 95 69.5
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 1.1e-23 113.6 71 85.9
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 2.1e-22 109.4 63 88.9
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 3.6e-22 108.6 61 91.8
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 4.0e-21 105.1 116 49.1
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 3.8e-19 98.6 64 78.1
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 3.8e-19 98.6 67 74.6
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 8.4e-19 97.4 66 75.8
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 1.1e-18 97.1 112 44.6
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 1.1e-18 97.1 64 76.6
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 4.2e-18 95.1 74 68.9
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 1.2e-17 93.6 65 75.4
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 2.1e-17 92.8 110 55.5
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 1.3e-16 90.1 65 72.3
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.3e-14 83.6 125 37.6
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 3.6e-14 82.0 51 84.3
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 7.6e-12 74.3 126 34.9
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 3.0e-08 62.4 120 36.7


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